prot_D-dudresnayi_contig10274.311.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig10274.311.1
Unique Nameprot_D-dudresnayi_contig10274.311.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length67
Homology
BLAST of mRNA_D-dudresnayi_contig10274.311.1 vs. uniprot
Match: D8LIJ4_ECTSI (Pyruvate dehydrogenase E1 component subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIJ4_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 1.420e-35
Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 0
Query:    1 MGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQIVNSAAKQLYMSAGDCPVPIVFRGPNGAASGVGA 67
            MGF GLATGAAYKDLRPVVEFMTFNFSLQAIDQI+NSAAKQLYMSAGDCPVP+VFRGPNGAASGVGA
Sbjct:   92 MGFTGLATGAAYKDLRPVVEFMTFNFSLQAIDQILNSAAKQLYMSAGDCPVPVVFRGPNGAASGVGA 158          
BLAST of mRNA_D-dudresnayi_contig10274.311.1 vs. uniprot
Match: A0A835YH27_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH27_9STRA)

HSP 1 Score: 120 bits (300), Expect = 3.470e-31
Identity = 57/67 (85.07%), Postives = 63/67 (94.03%), Query Frame = 0
Query:    1 MGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQIVNSAAKQLYMSAGDCPVPIVFRGPNGAASGVGA 67
            MGF GLA GAAYKDLRPVVEFMTFNFS+QAIDQ++NSAAKQLYM+AGD PVPIVFRGPNG+A+GV A
Sbjct:   88 MGFTGLAVGAAYKDLRPVVEFMTFNFSMQAIDQVINSAAKQLYMTAGDIPVPIVFRGPNGSAAGVAA 154          
BLAST of mRNA_D-dudresnayi_contig10274.311.1 vs. uniprot
Match: A0A7S2ME39_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ME39_9STRA)

HSP 1 Score: 119 bits (298), Expect = 8.990e-31
Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0
Query:    1 MGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQIVNSAAKQLYMSAGDCPVPIVFRGPNGAASGVGA 67
            MGF GLA GAAYKDLRPVVEFMTFNFS+QAIDQ++NSAAKQLYMSAG  PVPIVFRGPNGAA+GV A
Sbjct:  103 MGFTGLACGAAYKDLRPVVEFMTFNFSMQAIDQVINSAAKQLYMSAGTIPVPIVFRGPNGAAAGVAA 169          
BLAST of mRNA_D-dudresnayi_contig10274.311.1 vs. uniprot
Match: A0A2R5GV15_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GV15_9STRA)

HSP 1 Score: 116 bits (291), Expect = 7.150e-30
Identity = 56/67 (83.58%), Postives = 62/67 (92.54%), Query Frame = 0
Query:    1 MGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQIVNSAAKQLYMSAGDCPVPIVFRGPNGAASGVGA 67
            MGF GLA G+AYK LRPVVEFMTFNF++QAIDQI+NSAAKQLYM+AG C VPIVFRGPNGAA+GVGA
Sbjct:   86 MGFTGLAVGSAYKGLRPVVEFMTFNFAMQAIDQIINSAAKQLYMTAGTCNVPIVFRGPNGAAAGVGA 152          
BLAST of mRNA_D-dudresnayi_contig10274.311.1 vs. uniprot
Match: A0A7S2XVY3_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVY3_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.280e-28
Identity = 54/67 (80.60%), Postives = 59/67 (88.06%), Query Frame = 0
Query:    1 MGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQIVNSAAKQLYMSAGDCPVPIVFRGPNGAASGVGA 67
            MGF GLA GA YKDLRP++EFMTFNFS+QAIDQI+NSAAKQ YMSAGD P PIVFRGPNG A+GV A
Sbjct:   92 MGFTGLAIGACYKDLRPILEFMTFNFSMQAIDQIINSAAKQNYMSAGDIPCPIVFRGPNGPAAGVAA 158          
BLAST of mRNA_D-dudresnayi_contig10274.311.1 vs. uniprot
Match: A0A7S4E516_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E516_9STRA)

HSP 1 Score: 112 bits (280), Expect = 3.100e-28
Identity = 55/67 (82.09%), Postives = 60/67 (89.55%), Query Frame = 0
Query:    1 MGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQIVNSAAKQLYMSAGDCPVPIVFRGPNGAASGVGA 67
            MGFAG+ TGAAYKDL+PV EFMTFNF++QAIDQIVNSAAKQ YMS GD  VPIVFRGPNGAA+GV A
Sbjct:   86 MGFAGICTGAAYKDLKPVCEFMTFNFAMQAIDQIVNSAAKQAYMSNGDMNVPIVFRGPNGAAAGVAA 152          
BLAST of mRNA_D-dudresnayi_contig10274.311.1 vs. uniprot
Match: A0A812SWM7_9DINO (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812SWM7_9DINO)

HSP 1 Score: 112 bits (279), Expect = 4.530e-28
Identity = 55/67 (82.09%), Postives = 60/67 (89.55%), Query Frame = 0
Query:    1 MGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQIVNSAAKQLYMSAGDCPVPIVFRGPNGAASGVGA 67
            MGFAG+  GAA   L+PV+EFMTFNFS+QAIDQIVNSAAKQLYMSAGD  VPIVFRGPNGAA+GVGA
Sbjct:   93 MGFAGIGVGAAMNGLKPVIEFMTFNFSMQAIDQIVNSAAKQLYMSAGDINVPIVFRGPNGAAAGVGA 159          
BLAST of mRNA_D-dudresnayi_contig10274.311.1 vs. uniprot
Match: A0A813BYQ3_9DINO (Pyruvate dehydrogenase E1 component subunit beta (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BYQ3_9DINO)

HSP 1 Score: 105 bits (263), Expect = 5.690e-28
Identity = 52/65 (80.00%), Postives = 56/65 (86.15%), Query Frame = 0
Query:    1 MGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQIVNSAAKQLYMSAGDCPVPIVFRGPNGAASGV 65
            MGFAGL  GAA   LRP++EFMTFNFS+QAIDQIVNSA KQLYMSAGD   PIVFRGPNGAA+GV
Sbjct:   61 MGFAGLGVGAAMGGLRPIIEFMTFNFSMQAIDQIVNSAGKQLYMSAGDINCPIVFRGPNGAAAGV 125          
BLAST of mRNA_D-dudresnayi_contig10274.311.1 vs. uniprot
Match: A0A0B7ACQ9_9EUPU (Pyruvate dehydrogenase E1 component subunit beta (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7ACQ9_9EUPU)

HSP 1 Score: 111 bits (277), Expect = 9.660e-28
Identity = 56/67 (83.58%), Postives = 58/67 (86.57%), Query Frame = 0
Query:    1 MGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQIVNSAAKQLYMSAGDCPVPIVFRGPNGAASGVGA 67
            MGFAG+A GAA   LRPV EFMTFNFSLQAIDQ+VNSAAK  YMSAG  PVPIVFRGPNGAASGVGA
Sbjct:   97 MGFAGIAVGAAMAGLRPVCEFMTFNFSLQAIDQVVNSAAKTFYMSAGTVPVPIVFRGPNGAASGVGA 163          
BLAST of mRNA_D-dudresnayi_contig10274.311.1 vs. uniprot
Match: F0YEJ7_AURAN (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEJ7_AURAN)

HSP 1 Score: 110 bits (274), Expect = 1.660e-27
Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 0
Query:    1 MGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQIVNSAAKQLYMSAGDCPVPIVFRGPNGAASGVGA 67
            MGFAG+ATGAAYKDL+P+ EFMTFNF++QAIDQIVNSAAKQ YM+ GD   PIVFRGPNGAA+GV A
Sbjct:   63 MGFAGIATGAAYKDLKPICEFMTFNFAMQAIDQIVNSAAKQAYMTNGDFGCPIVFRGPNGAAAGVAA 129          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10274.311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIJ4_ECTSI1.420e-3595.52Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A835YH27_9STRA3.470e-3185.07Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A7S2ME39_9STRA8.990e-3186.57Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A2R5GV15_9STRA7.150e-3083.58Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A7S2XVY3_9STRA2.280e-2880.60Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A7S4E516_9STRA3.100e-2882.09Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A812SWM7_9DINO4.530e-2882.09Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A813BYQ3_9DINO5.690e-2880.00Pyruvate dehydrogenase E1 component subunit beta (... [more]
A0A0B7ACQ9_9EUPU9.660e-2883.58Pyruvate dehydrogenase E1 component subunit beta (... [more]
F0YEJ7_AURAN1.660e-2779.10Pyruvate dehydrogenase E1 component subunit beta n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.970coord: 1..67
e-value: 7.5E-24
score: 85.8
NoneNo IPR availablePANTHERPTHR11624:SF56PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA, MITOCHONDRIALcoord: 1..67
IPR005475Transketolase-like, pyrimidine-binding domainPFAMPF02779Transket_pyrcoord: 2..62
e-value: 2.7E-10
score: 40.2
IPR027110Pyruvate dehydrogenase E1 component subunit betaPANTHERPTHR11624DEHYDROGENASE RELATEDcoord: 1..67
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 2..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10274contigD-dudresnayi_contig10274:2727..2927 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10274.311.1mRNA_D-dudresnayi_contig10274.311.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig10274 2718..2927 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig10274.311.1 ID=prot_D-dudresnayi_contig10274.311.1|Name=mRNA_D-dudresnayi_contig10274.311.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=67bp
MGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQIVNSAAKQLYMSAGDCP
VPIVFRGPNGAASGVGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005475Transketolase-like_Pyr-bd
IPR027110PDHB
IPR029061THDP-binding