prot_D-dudresnayi_contig10101.140.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-dudresnayi_contig10101.140.1
Unique Name	prot_D-dudresnayi_contig10101.140.1
Type	polypeptide
Organism	Desmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length	182

Homology

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BLAST of mRNA_D-dudresnayi_contig10101.140.1 vs. uniprot
Match: FCPB_MACPY (Fucoxanthin-chlorophyll a-c binding protein B, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPB_MACPY)

HSP 1 Score: 337 bits (865), Expect = 2.640e-116
Identity = 165/181 (91.16%), Postives = 173/181 (95.58%), Query Frame = 0

Query:    1 MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLATVGHMVQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTIGGNPFASSWDAMSSETQDSKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLAGASYSFN 181
            MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLA  GH+ QQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQI AFIGFLELAVMKNVEGSFPGDFT+GGNPF +SWDAMS ETQ SKRAIELNNGRAAQMGILA+MVHEEL+N+PY+INDL GASY+FN
Sbjct:   37 MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGASWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLVGASYTFN 217

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BLAST of mRNA_D-dudresnayi_contig10101.140.1 vs. uniprot
Match: FCPF_MACPY (Fucoxanthin-chlorophyll a-c binding protein F, chloroplastic (Fragment) n=1 Tax=Macrocystis pyrifera TaxID=35122 RepID=FCPF_MACPY)

HSP 1 Score: 336 bits (862), Expect = 6.130e-116
Identity = 167/181 (92.27%), Postives = 170/181 (93.92%), Query Frame = 0

Query:    1 MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLATVGHMVQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTIGGNPFASSWDAMSSETQDSKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLAGASYSFN 181
            MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLA  GH+ QQNTRLPGMLSNSANLSFADMPNGVAALSKIPP GLAQI  FIGFLELAVMKNVEGSFPGDF IGGNPFASSWD+MSSETQ SKRAIELNNGRAAQMGIL MMVHEELSNQPYI NDL GASY+FN
Sbjct:   31 MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFIIGGNPFASSWDSMSSETQASKRAIELNNGRAAQMGILGMMVHEELSNQPYITNDLLGASYTFN 211

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BLAST of mRNA_D-dudresnayi_contig10101.140.1 vs. uniprot
Match: A0A6H5KCX6_9PHAE (LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5KCX6_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 1.580e-115
Identity = 165/181 (91.16%), Postives = 172/181 (95.03%), Query Frame = 0

Query:    1 MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLATVGHMVQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTIGGNPFASSWDAMSSETQDSKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLAGASYSFN 181
            MKMSFESEIGAQ PLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLA  GH+ QQN RLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQI AF+GFLELAVMKNVEGSFPGDFT GGNPFASSWDAMS ETQ+SKRAIELNNGRAAQMGILA+MVHEEL+N+PYIINDL GASY+FN
Sbjct:   38 MKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYIINDLLGASYTFN 218

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BLAST of mRNA_D-dudresnayi_contig10101.140.1 vs. uniprot
Match: FCPD_MACPY (Fucoxanthin-chlorophyll a-c binding protein D, chloroplastic (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=FCPD_MACPY)

HSP 1 Score: 334 bits (856), Expect = 1.820e-115
Identity = 163/181 (90.06%), Postives = 171/181 (94.48%), Query Frame = 0

Query:    1 MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLATVGHMVQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTIGGNPFASSWDAMSSETQDSKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLAGASYSFN 181
            MKMSFE EIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLA  GH+ QQN RLPGMLSNSANLSFADMPNGVAALSKIPP GLAQI  FIGFLELAVMKNVEGSFPGDFT+GGNPFASSWDAMS ETQ+SKRAIELNNGRAAQMGILA+MVHEEL+N+PY+INDL GASY+FN
Sbjct:    2 MKMSFELEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 182

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BLAST of mRNA_D-dudresnayi_contig10101.140.1 vs. uniprot
Match: A0A6H5JDS8_9PHAE (LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS8_9PHAE)

HSP 1 Score: 333 bits (853), Expect = 5.040e-115
Identity = 163/181 (90.06%), Postives = 170/181 (93.92%), Query Frame = 0

Query:    1 MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLATVGHMVQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTIGGNPFASSWDAMSSETQDSKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLAGASYSFN 181
            MKMSFESEIGAQ PLGFWDPLGLL DADQERFERLRYVEVKHGRIAMLA  GH+ QQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQI AFIGFLELAVMKNVEGSFPGDFT+GGNPF SSWDAMS ETQ SKRAIELNNGRAAQMGILA+MVHEEL+N+PY+INDL GA Y+FN
Sbjct:    1 MKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYNFN 181

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BLAST of mRNA_D-dudresnayi_contig10101.140.1 vs. uniprot
Match: A0A6H5JHT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT6_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 2.390e-113
Identity = 162/181 (89.50%), Postives = 170/181 (93.92%), Query Frame = 0

Query:    1 MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLATVGHMVQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTIGGNPFASSWDAMSSETQDSKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLAGASYSFN 181
            MKMSFESEIGAQ PLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLA  GH+ QQN RLPGMLSNSA+LSFADMPNGVAALSKIPPAGLAQI AF+GFLELAVMKNVEGSFPGDFT GGNPFASSWDAMS ETQ SKRAIELNNGRAAQMGILA+MVHEEL+N+PY+INDL GA Y+FN
Sbjct:   41 MKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSADLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 221

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BLAST of mRNA_D-dudresnayi_contig10101.140.1 vs. uniprot
Match: D8LNK6_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK6_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 4.040e-112
Identity = 163/181 (90.06%), Postives = 170/181 (93.92%), Query Frame = 0

Query:    1 MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLATVGHMVQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTIGGNPFASSWDAMSSETQDSKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLAGASYSFN 181
            MKMSFESEIGAQ PLGFWDPLGLL DADQERFERLRYVEVKHGRIAMLA  GH+ QQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQI AFIGFLELAVMKNVEGSFPGDFT+GGNPF SSWDAMS ETQ SKRAIELNNGRAAQMGILA+MVHEEL+N+PY+INDL GA Y+FN
Sbjct:  197 MKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 377

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BLAST of mRNA_D-dudresnayi_contig10101.140.1 vs. uniprot
Match: FCPC_MACPY (Fucoxanthin-chlorophyll a-c binding protein C, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPC_MACPY)

HSP 1 Score: 325 bits (834), Expect = 1.350e-111
Identity = 160/181 (88.40%), Postives = 169/181 (93.37%), Query Frame = 0

Query:    1 MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLATVGHMVQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTIGGNPFASSWDAMSSETQDSKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLAGASYSFN 181
            MKMSFESEIGAQAPLGFWDPLGLL DADQ+ FERLRYVEVK GRIAMLA  GH+ QQN RLPGMLSNSANLSFADMPNGVAALSKIPP GLAQI  FIGFLELAVMKNVEGSFPGDFT+GGNPFASSWDAMS+ETQ SKRAIELNNGRAAQMGILA+MVHEEL+N+PY+INDL GASY+FN
Sbjct:   36 MKMSFESEIGAQAPLGFWDPLGLLEDADQDAFERLRYVEVKLGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSAETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 216

[Close]

BLAST of mRNA_D-dudresnayi_contig10101.140.1 vs. uniprot
Match: FCPE_MACPY (Fucoxanthin-chlorophyll a-c binding protein E, chloroplastic n=3 Tax=Phaeophyceae TaxID=2870 RepID=FCPE_MACPY)

HSP 1 Score: 293 bits (749), Expect = 1.040e-98
Identity = 146/181 (80.66%), Postives = 156/181 (86.19%), Query Frame = 0

Query:    1 MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLATVGHMVQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTIGGNPFASSWDAMSSETQDSKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLAGASYSFN 181
            MKMSFESEIGAQ P+GFWDPLGL+ADADQERF+RLRYVE+KHGRIAMLA VGH+ QQNTRLPGMLS   NL+FAD PNGVAA SKIPP G  QII  IG  EL V+K VEGSFPGD T GGN F S+WD MS ETQ SKRAIELNNGRAAQMGILAMMVHE+LSNQPYIINDLAGA+Y FN
Sbjct:   32 MKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVVGHITQQNTRLPGMLSFKENLAFADSPNGVAAFSKIPPLGTLQIILAIGCHELFVVKQVEGSFPGDCTTGGNIFQSAWDNMSEETQASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYQFN 212

[Close]

BLAST of mRNA_D-dudresnayi_contig10101.140.1 vs. uniprot
Match: A0A6H5KBS3_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS3_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 2.310e-96
Identity = 147/206 (71.36%), Postives = 160/206 (77.67%), Query Frame = 0

Query:    1 MKMSFESEIGAQAPLGFWDPLGLLADA-------------------------DQERFERLRYVEVKHGRIAMLATVGHMVQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTIGGNPFASSWDAMSSETQDSKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLAGASYSFN 181
            MKMSFESE+GAQ PLGF+DPLGLL D                          DQERF+RLRYVEVKHGRI+MLA  GH+V QN R PG LS  A L+FADMPNGVAA+SKIPP GLAQI+AFIGFLEL VMKNVEGSFPGD TIGGNPFA+ WDAMS ET+ SKRAIELNNGRAAQMGILAMM+HEE+SNQPYIINDL  A Y+FN
Sbjct:    1 MKMSFESELGAQPPLGFFDPLGLLIDQVVPQLPPSCQSSLLVICADGLEPWEDQERFDRLRYVEVKHGRISMLAVAGHLVAQNYRFPGYLSYDAKLTFADMPNGVAAISKIPPLGLAQIVAFIGFLELNVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMIHEEISNQPYIINDLLNAPYTFN 206

The following BLAST results are available for this feature:

BLAST of mRNA_D-dudresnayi_contig10101.140.1 vs. uniprot

BLAST of mRNA_D-dudresnayi_contig10101.140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
FCPB_MACPY	2.640e-116	91.16	Fucoxanthin-chlorophyll a-c binding protein B, chl...	[more]
FCPF_MACPY	6.130e-116	92.27	Fucoxanthin-chlorophyll a-c binding protein F, chl...	[more]
A0A6H5KCX6_9PHAE	1.580e-115	91.16	LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepI...	[more]
FCPD_MACPY	1.820e-115	90.06	Fucoxanthin-chlorophyll a-c binding protein D, chl...	[more]
A0A6H5JDS8_9PHAE	5.040e-115	90.06	LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
A0A6H5JHT6_9PHAE	2.390e-113	89.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LNK6_ECTSI	4.040e-112	90.06	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
FCPC_MACPY	1.350e-111	88.40	Fucoxanthin-chlorophyll a-c binding protein C, chl...	[more]
FCPE_MACPY	1.040e-98	80.66	Fucoxanthin-chlorophyll a-c binding protein E, chl...	[more]
A0A6H5KBS3_9PHAE	2.310e-96	71.36	LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 7..177 e-value: 7.9E-26 score: 93.0
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 9..161 e-value: 3.2E-33 score: 115.5
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 2..165
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 2..171
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 2..165

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-dudresnayi_contig10101	contig	D-dudresnayi_contig10101:9669..10214 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-dudresnayi_contig10101.140.1	mRNA_D-dudresnayi_contig10101.140.1	Desmarestia dudresnayi DdudBR16 monoicous	mRNA	D-dudresnayi_contig10101 8109..11162 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-dudresnayi_contig10101.140.1 ID=prot_D-dudresnayi_contig10101.140.1|Name=mRNA_D-dudresnayi_contig10101.140.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=182bp
MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAT
VGHMVQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIIAFIGF
LELAVMKNVEGSFPGDFTIGGNPFASSWDAMSSETQDSKRAIELNNGRAA
QMGILAMMVHEELSNQPYIINDLAGASYSFN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind
IPR001344	Chloro_AB-bd_pln