prot_D-dudresnayi_contig1009.125.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig1009.125.1
Unique Nameprot_D-dudresnayi_contig1009.125.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length163
Homology
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BLAST of mRNA_D-dudresnayi_contig1009.125.1 vs. uniprot
Match: D8LH26_ECTSI (Leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH26_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 6.240e-68
Identity = 105/163 (64.42%), Postives = 130/163 (79.75%), Query Frame = 0 
Query:    1 MTAPGVDALCSTHPNRSSLTELDISGIGVTAETLEIICMHCGNIEVLRMGFIEYMEATLKQTLLPLVPQLRSLHVHWNSCITDAFLLWVAKNLPRLEDLNVYGCAAVSVDGVSDLLFDRQEAI-KTNRPGMWSAIEKINVRYTSITKQDIEALQATFERTKIV 162
            +TAPGVDALC  HPN     ELDISG+ VT  TLE+IC  C ++EVLR+GFIEYME TLK TL PL+P LRSLHVHWN+CITD FL W ++ +PRL+DLN+ GC+ VSVDGVSD++ +RQEA+ K    G+ SAIEK+NVRYTS++K DIEALQA ++ T+IV
Sbjct:  179 ITAPGVDALCGLHPNAPRFAELDISGLNVTTHTLEVICHRCRHLEVLRIGFIEYMEDTLKDTLPPLLPNLRSLHVHWNTCITDEFLSWASQAIPRLQDLNLCGCSKVSVDGVSDMIHERQEALEKDGNAGLISAIEKVNVRYTSLSKHDIEALQAAYQGTEIV 341
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1009.125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH26_ECTSI6.240e-6864.42Leucine rich repeat protein n=2 Tax=Ectocarpus Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..162
e-value: 2.8E-17
score: 64.7
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 12..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig1009contigD-dudresnayi_contig1009:4760..9522 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig1009.125.1mRNA_D-dudresnayi_contig1009.125.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig1009 1833..10303 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig1009.125.1 ID=prot_D-dudresnayi_contig1009.125.1|Name=mRNA_D-dudresnayi_contig1009.125.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=163bp
MTAPGVDALCSTHPNRSSLTELDISGIGVTAETLEIICMHCGNIEVLRMG
FIEYMEATLKQTLLPLVPQLRSLHVHWNSCITDAFLLWVAKNLPRLEDLN
VYGCAAVSVDGVSDLLFDRQEAIKTNRPGMWSAIEKINVRYTSITKQDIE
ALQATFERTKIV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf