prot_D-dudresnayi_contig10079.114.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-dudresnayi_contig10079.114.1
Unique Name	prot_D-dudresnayi_contig10079.114.1
Type	polypeptide
Organism	Desmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length	388

Homology

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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: D7FPK4_ECTSI (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPK4_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 5.990e-116
Identity = 243/421 (57.72%), Postives = 278/421 (66.03%), Query Frame = 0

Query:    1 MNVVQEIRRINERELQQGLSGKASWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRERAEKLEEERLAKGEEPSAKGAQWRPGIAYEGKQLATAENFHKGVDVFAAPDKGPGSSDDSDGPG-VRGESSAAKRERREAXXXXXXXXXEARGHK-----------------------KHKGDRRDSAEYRKKHKMKKYKKDDRGTGRDRQQETSTADYRNXXXXXXXXXXXXXXXXXXXGSTAIAGRASGGXXXXADAAGAWERGARSSGDAPF--GASFNSSAPPRQGDAPA-----PLSTGNVLDWRGLGGRXXXXXXXXXRETG---RGXXXXXXXXXXXXXXXEERNSLGGMDRRR 387
            MNV+QEI+RINEREL+QG+SGKASWHHEYKDSAWV+ GGF YDLTEGD+LCVMSQWGEIEDINLCREKDTGKSKGF FIKYE+Q+STILAVDNFNGIDLLGRT+RVDHKHKYSLPAEVRE+AEK +EER+A+GE PS KG QWRPG+AYEGKQLAT+ NFHKGVDVFA P++G GSSDDSDG G   GES+         XXXXXXXXX                             +HK D                K + R  G+D  ++T ++++                     G     GR+SG     ADA+GAWERGAR+ GD P   G  F+SS+ P  G APA     PLS+GNV+DWRGLGGR      XXX        G   XXXXXXXXXXXX   NS+GGMDRRR
Sbjct:    1 MNVIQEIKRINERELEQGVSGKASWHHEYKDSAWVFAGGFPYDLTEGDILCVMSQWGEIEDINLCREKDTGKSKGFCFIKYENQKSTILAVDNFNGIDLLGRTIRVDHKHKYSLPAEVREKAEKEDEERVARGEAPSEKGPQWRPGVAYEGKQLATSHNFHKGVDVFAKPEQGSGSSDDSDGAGGTLGESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHKKDXXXEE-----------KXEGRAHGKD--EKTRSSEHPRAGNGGRGEERVGGRHDHRRGKEPPTGRSSG-----ADASGAWERGARAPGDGPSSGGTPFSSSSQP-SGRAPALAPPVPLSSGNVMDWRGLGGRAAGGRGXXXXXXXXXREGAGRXXXXXXXXXXXXXXMNSMGGMDRRR 402

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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: A0A835YJH4_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJH4_9STRA)

HSP 1 Score: 224 bits (570), Expect = 7.140e-69
Identity = 107/171 (62.57%), Postives = 138/171 (80.70%), Query Frame = 0

Query:    1 MNVVQEIRRINERELQQGLSGKASWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRERAEKLEE---ERLAKGEEPSAKGAQWRPGIAYEGKQLATAENFHKGVDVFA 168
            MNVV+EI++INEREL++GL+G ASWHH+YKDSAWV+VGG  Y+LTEGD++CV+SQWGEIEDINL R++DTGKSKGF F+KYEDQRSTILAVDN NG  LLGR +RVDH  KY LP E++++ +  +E   E+  +G EP +  A W+PG AYEGK++  +    +GVDV+A
Sbjct:    1 MNVVREIQKINERELKEGLTGSASWHHKYKDSAWVFVGGLGYELTEGDVICVLSQWGEIEDINLVRDQDTGKSKGFAFVKYEDQRSTILAVDNMNGAQLLGRPLRVDHVEKYRLPKELQDKEDAQQEGGGEQGGEGGEPRSAAA-WKPGHAYEGKEIRGSHTLAQGVDVWA 170

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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: A0A7S2RL84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RL84_9STRA)

HSP 1 Score: 221 bits (562), Expect = 1.390e-67
Identity = 112/184 (60.87%), Postives = 140/184 (76.09%), Query Frame = 0

Query:    1 MNVVQEIRRINERELQQGLSGKA-SWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRERAEKLEEERLAKGEEPSAKG-AQWRPGIAYEGKQLATAENFHKGVDVFAAPDKGP-GSSDDSD 181
            MNV+QEI+RINE EL +G++G A SWH +Y+DSA+V+VGG  YDL EGD+LCV SQWGE+EDINL R++ TGKSKGF FIKYEDQRST+LAVDNFNG++LLGR +RVDH  KY LP+ +RE+ E  EE     G E   +  +++RPG AYEG +LA   N HKGVD++  PD    GS +DSD
Sbjct:    2 MNVIQEIKRINEEELSRGVAGGAGSWHAQYRDSAYVFVGGLPYDLVEGDVLCVFSQWGEVEDINLVRDEKTGKSKGFAFIKYEDQRSTVLAVDNFNGVELLGRLIRVDHVAKYKLPSHLREKEEAEEENSGHYGPEGDGEEESKYRPGHAYEGAELANKFNIHKGVDLYGGPDDSDDGSGEDSD 185

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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: A0A4D9D1V2_9STRA (RRM domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1V2_9STRA)

HSP 1 Score: 226 bits (576), Expect = 7.370e-67
Identity = 110/174 (63.22%), Postives = 137/174 (78.74%), Query Frame = 0

Query:    1 MNVVQEIRRINERELQQGLSG-KASWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRERAEKLEEERLAKGEEPSAKGAQWRPGIAYEGKQLATAENFHKGVDVFAAPDKG 173
            MNVV+EI+R+NE+ELQ+G +G + SWH +YKDSAWV+VG     L+EGD+LCVMSQWGEIED++L R+K TGKSKGF F+KYEDQRSTILAVDN NGI LL RT+RVDHK KY+LP EV E+AE+ E+ RL  GE+    G +W+PG AYEGK+L    +  KGVD+FA   +G
Sbjct:    1 MNVVREIQRLNEKELQRGTAGMEGSWHGQYKDSAWVFVGSLPLQLSEGDVLCVMSQWGEIEDLHLVRDKGTGKSKGFAFLKYEDQRSTILAVDNMNGIKLLERTLRVDHKEKYALPKEVLEKAEEKEKARLEAGEDGGGGGPRWKPGHAYEGKELVEGHDLSKGVDLFAPVQEG 174

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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: A0A7S3YEY6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEY6_HETAK)

HSP 1 Score: 206 bits (525), Expect = 7.050e-61
Identity = 101/168 (60.12%), Postives = 132/168 (78.57%), Query Frame = 0

Query:    1 MNVVQEIRRINERELQQGLSGK-ASWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRERAEKLEEERLAKGEEPSAKGAQWRPGIAYEGKQLATAENFHKGVDVF 167
            MNV+QEI+RIN+REL+ GL+G  ASWH +YK+SAWVYVG   Y LTEGD+LC MSQWGEIEDIN  R+KDTGK KGF F+KYEDQRST+LAVDNFNGI+L+ RT+RVDH  KY LP EV+++ ++LEE+    G++  +  +++ PG AY+  +LA+  +  KG D+F
Sbjct:    1 MNVIQEIKRINDRELEAGLTGTDASWHSKYKNSAWVYVGSIPYALTEGDILCFMSQWGEIEDINYVRDKDTGKPKGFAFVKYEDQRSTVLAVDNFNGIELVDRTLRVDHCEKYRLPKEVQDKEDQLEEDAKLLGKQHDS-SSKFGPGHAYKDMELASKYDIAKGQDLF 167

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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: W4H400_9STRA (RRM domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=W4H400_9STRA)

HSP 1 Score: 206 bits (524), Expect = 9.940e-61
Identity = 102/167 (61.08%), Postives = 126/167 (75.45%), Query Frame = 0

Query:    1 MNVVQEIRRINERELQQGLSGKASWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRERAEKLEEERLAKGEEPSAKGAQWRPGIAYEGKQLATAENFHKGVDVF 167
            MNV++EI+R+NE+EL+QG+S + SWHH Y+DSAWVYVGG  YDLTEGD+LCV SQ GEIEDINL R+KDTGKS GF FIKYE+  ST+LAVDNFNG  LL R +RVDH HKY LP E+R++     EE +    +   +G   +PG AYEGK+L    + H+GVDVF
Sbjct:    1 MNVIKEIQRLNEQELEQGVSIEGSWHHIYRDSAWVYVGGLSYDLTEGDILCVFSQVGEIEDINLVRDKDTGKSMGFSFIKYENHLSTVLAVDNFNGSTLLERLLRVDHVHKYKLPKELRDK-----EENVVADHDDELRG---KPGHAYEGKELENKFDIHQGVDVF 159

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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: A0A485KUA3_9STRA (Aste57867_11943 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUA3_9STRA)

HSP 1 Score: 204 bits (518), Expect = 8.310e-60
Identity = 100/167 (59.88%), Postives = 126/167 (75.45%), Query Frame = 0

Query:    1 MNVVQEIRRINERELQQGLSGKASWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRERAEKLEEERLAKGEEPSAKGAQWRPGIAYEGKQLATAENFHKGVDVF 167
            MNV++EI+R+NE+EL+QG+  + SWHH Y+DSAWVY+GG  Y+LTEGD+LCV SQ GEIEDINL R+KD+GKS GF FIKYE   ST+LAVDNFNG  LL R +RVDH HKY LP E+R++ + ++E      E    +G   RPG AYEGK+LA   + H+GVDVF
Sbjct:    1 MNVIKEIQRLNEQELEQGVGYEGSWHHIYRDSAWVYIGGLSYELTEGDILCVFSQVGEIEDINLVRDKDSGKSMGFCFIKYEHHMSTVLAVDNFNGSSLLERMLRVDHVHKYKLPKELRDKEDNVDE---PVDENDEMRG---RPGHAYEGKELANKYDIHEGVDVF 161

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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: A0A024UQN5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQN5_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.880e-59
Identity = 104/167 (62.28%), Postives = 126/167 (75.45%), Query Frame = 0

Query:    1 MNVVQEIRRINERELQQGLSGKASWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRERAEKLEEERLAKGEEPSAKGAQWRPGIAYEGKQLATAENFHKGVDVF 167
            MNV++EI+R+NE+EL+QG+  + SWHH Y+DSAWVYVGG  Y+LTEGD+LCV SQ GEIEDINL R+KDTGKS GF FIKYE+  ST+LAVDNFNG  LL R +RVDH HKY LP E+R++    EE  +A  EE   K     PG AYEGK+LA   + H+GVDVF
Sbjct:    1 MNVIKEIQRLNEQELEQGVGIEGSWHHIYRDSAWVYVGGLSYELTEGDILCVFSQVGEIEDINLVRDKDTGKSMGFSFIKYENHLSTVLAVDNFNGSTLLERMLRVDHVHKYKLPKELRDK----EENEVADDEELRGK-----PGHAYEGKELANKFDIHQGVDVF 158

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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: T0R8P5_SAPDV (RRM domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R8P5_SAPDV)

HSP 1 Score: 202 bits (514), Expect = 3.930e-59
Identity = 98/167 (58.68%), Postives = 126/167 (75.45%), Query Frame = 0

Query:    1 MNVVQEIRRINERELQQGLSGKASWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRERAEKLEEERLAKGEEPSAKGAQWRPGIAYEGKQLATAENFHKGVDVF 167
            MNV++EI R+N++EL QG+S + SWHH Y++SAWVYVGG  Y+LTEGD+LCV SQ GEIEDINL R+KDTGKS GF F+KYED RST+LAVDNFNG  LL R +RVDH HKY LP E+R++ + ++++          +G   + G AY+ K+LAT  + HKGVDVF
Sbjct:    1 MNVIKEIERLNQQELDQGVSYEGSWHHIYRESAWVYVGGLSYELTEGDVLCVFSQVGEIEDINLVRDKDTGKSMGFAFLKYEDHRSTVLAVDNFNGSSLLERLLRVDHVHKYKLPKELRDKEDGVDDDDALDDAIDELRG---QAGHAYKDKELATKFDIHKGVDVF 164

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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: A0A1V9ZVW6_9STRA (U2 snRNP component IST3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVW6_9STRA)

HSP 1 Score: 198 bits (503), Expect = 4.150e-59
Identity = 97/168 (57.74%), Postives = 123/168 (73.21%), Query Frame = 0

Query:    1 MNVVQEIRRINERELQQGLSGKASWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRER--AEKLEEERLAKGEEPSAKGAQWRPGIAYEGKQLATAENFHKGVDV 166
            MNVV+EI R+N++EL QG+  + SWH+ Y+DSAW+YVG   Y+L+EGD+LCV SQ+GEIEDINL R+K+TGKS GF FIKYED RST+LAVDNFNG  LL RT+RVDH HKY LP E+R++  A+  EEE   +G+          PG AY+GK L    + H+GVD 
Sbjct:    1 MNVVKEIERLNQQELDQGIGYEGSWHYIYRDSAWIYVGSLSYELSEGDVLCVFSQFGEIEDINLVRDKETGKSMGFAFIKYEDHRSTVLAVDNFNGSTLLERTLRVDHVHKYKLPKEIRDKEDAQDFEEEEKLRGQ----------PGHAYKGKDLENKYDIHQGVDT 158

The following BLAST results are available for this feature:

BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot

BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FPK4_ECTSI	5.990e-116	57.72	RRM domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A835YJH4_9STRA	7.140e-69	62.57	RRM domain-containing protein n=1 Tax=Tribonema mi...	[more]
A0A7S2RL84_9STRA	1.390e-67	60.87	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
A0A4D9D1V2_9STRA	7.370e-67	63.22	RRM domain-containing protein n=1 Tax=Nannochlorop...	[more]
A0A7S3YEY6_HETAK	7.050e-61	60.12	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
W4H400_9STRA	9.940e-61	61.08	RRM domain-containing protein n=3 Tax=Aphanomyces ...	[more]
A0A485KUA3_9STRA	8.310e-60	59.88	Aste57867_11943 protein n=1 Tax=Aphanomyces stella...	[more]
A0A024UQN5_9STRA	1.880e-59	62.28	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
T0R8P5_SAPDV	3.930e-59	58.68	RRM domain-containing protein n=2 Tax=Saprolegnia ...	[more]
A0A1V9ZVW6_9STRA	4.150e-59	57.74	U2 snRNP component IST3 n=1 Tax=Thraustotheca clav...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 189..216
None	No IPR available	PANTHER	PTHR45880	FAMILY NOT NAMED	coord: 1..277
None	No IPR available	PANTHER	PTHR45880:SF1	RNA-BINDING MOTIF PROTEIN, X-LINKED 2	coord: 1..277
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 34..107 e-value: 6.5E-20 score: 82.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 35..105 e-value: 1.1E-16 score: 60.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 33..111 score: 15.886
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 23..136 e-value: 3.5E-23 score: 84.0
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 24..111

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-dudresnayi_contig10079	contig	D-dudresnayi_contig10079:5881..8406 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-dudresnayi_contig10079.114.1	mRNA_D-dudresnayi_contig10079.114.1	Desmarestia dudresnayi DdudBR16 monoicous	mRNA	D-dudresnayi_contig10079 5881..8418 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-dudresnayi_contig10079.114.1 ID=prot_D-dudresnayi_contig10079.114.1|Name=mRNA_D-dudresnayi_contig10079.114.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=388bp
MNVVQEIRRINERELQQGLSGKASWHHEYKDSAWVYVGGFRYDLTEGDLL
CVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLL
GRTVRVDHKHKYSLPAEVRERAEKLEEERLAKGEEPSAKGAQWRPGIAYE
GKQLATAENFHKGVDVFAAPDKGPGSSDDSDGPGVRGESSAAKRERREAK
RARKEARREARGHKKHKGDRRDSAEYRKKHKMKKYKKDDRGTGRDRQQET
STADYRNGRDRAEANGHGERRDGRERGSTAIAGRASGGGGGGADAAGAWE
RGARSSGDAPFGASFNSSAPPRQGDAPAPLSTGNVLDWRGLGGRGAGGRG
GRGRETGRGGKEGGRGGGRGGRGGEERNSLGGMDRRR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf