mRNA_D-dudresnayi_contig10079.114.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10079.114.1
Unique NamemRNA_D-dudresnayi_contig10079.114.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: D7FPK4_ECTSI (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPK4_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 3.440e-116
Identity = 243/421 (57.72%), Postives = 278/421 (66.03%), Query Frame = 1 
Query:   13 MNVVQEIRRINERELQQGLSGKASWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRERAEKLEEERLAKGEEPSAKGAQWRPGIAYEGKQLATAENFHKGVDVFAAPDKGPGSSDDSDGPG-VRGESSAAKRERREAXXXXXXXXXEARGHK-----------------------KHKGDRRDSAEYRKKHKMKKYKKDDRGTGRDRQQETSTADYRNXXXXXXXXXXXXXXXXXXXGSTAIAGRASGGXXXXADAAGAWERGARSSGDAPF--GASFNSSAPPRQGDAPA-----PLSTGNVLDWRGLGGRXXXXXXXXXRETG---RGXXXXXXXXXXXXXXXEERNSLGGMDRRR 1173
            MNV+QEI+RINEREL+QG+SGKASWHHEYKDSAWV+ GGF YDLTEGD+LCVMSQWGEIEDINLCREKDTGKSKGF FIKYE+Q+STILAVDNFNGIDLLGRT+RVDHKHKYSLPAEVRE+AEK +EER+A+GE PS KG QWRPG+AYEGKQLAT+ NFHKGVDVFA P++G GSSDDSDG G   GES+         XXXXXXXXX                             +HK D                K + R  G+D  ++T ++++                     G     GR+SG     ADA+GAWERGAR+ GD P   G  F+SS+ P  G APA     PLS+GNV+DWRGLGGR      XXX        G   XXXXXXXXXXXX   NS+GGMDRRR
Sbjct:    1 MNVIQEIKRINERELEQGVSGKASWHHEYKDSAWVFAGGFPYDLTEGDILCVMSQWGEIEDINLCREKDTGKSKGFCFIKYENQKSTILAVDNFNGIDLLGRTIRVDHKHKYSLPAEVREKAEKEDEERVARGEAPSEKGPQWRPGVAYEGKQLATSHNFHKGVDVFAKPEQGSGSSDDSDGAGGTLGESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHKKDXXXEE-----------KXEGRAHGKD--EKTRSSEHPRAGNGGRGEERVGGRHDHRRGKEPPTGRSSG-----ADASGAWERGARAPGDGPSSGGTPFSSSSQP-SGRAPALAPPVPLSSGNVMDWRGLGGRAAGGRGXXXXXXXXXREGAGRXXXXXXXXXXXXXXMNSMGGMDRRR 402
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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: A0A835YJH4_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJH4_9STRA)

HSP 1 Score: 224 bits (572), Expect = 4.020e-69
Identity = 107/171 (62.57%), Postives = 138/171 (80.70%), Query Frame = 1 
Query:   13 MNVVQEIRRINERELQQGLSGKASWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRERAEKLEE---ERLAKGEEPSAKGAQWRPGIAYEGKQLATAENFHKGVDVFA 516
            MNVV+EI++INEREL++GL+G ASWHH+YKDSAWV+VGG  Y+LTEGD++CV+SQWGEIEDINL R++DTGKSKGF F+KYEDQRSTILAVDN NG  LLGR +RVDH  KY LP E++++ +  +E   E+  +G EP +  A W+PG AYEGK++  +    +GVDV+A
Sbjct:    1 MNVVREIQKINERELKEGLTGSASWHHKYKDSAWVFVGGLGYELTEGDVICVLSQWGEIEDINLVRDQDTGKSKGFAFVKYEDQRSTILAVDNMNGAQLLGRPLRVDHVEKYRLPKELQDKEDAQQEGGGEQGGEGGEPRSAAA-WKPGHAYEGKEIRGSHTLAQGVDVWA 170
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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: A0A7S2RL84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RL84_9STRA)

HSP 1 Score: 221 bits (564), Expect = 7.830e-68
Identity = 112/184 (60.87%), Postives = 140/184 (76.09%), Query Frame = 1 
Query:   13 MNVVQEIRRINERELQQGLSGKA-SWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRERAEKLEEERLAKGEEPSAKG-AQWRPGIAYEGKQLATAENFHKGVDVFAAPDKGP-GSSDDSD 555
            MNV+QEI+RINE EL +G++G A SWH +Y+DSA+V+VGG  YDL EGD+LCV SQWGE+EDINL R++ TGKSKGF FIKYEDQRST+LAVDNFNG++LLGR +RVDH  KY LP+ +RE+ E  EE     G E   +  +++RPG AYEG +LA   N HKGVD++  PD    GS +DSD
Sbjct:    2 MNVIQEIKRINEEELSRGVAGGAGSWHAQYRDSAYVFVGGLPYDLVEGDVLCVFSQWGEVEDINLVRDEKTGKSKGFAFIKYEDQRSTVLAVDNFNGVELLGRLIRVDHVAKYKLPSHLREKEEAEEENSGHYGPEGDGEEESKYRPGHAYEGAELANKFNIHKGVDLYGGPDDSDDGSGEDSD 185
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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: A0A4D9D1V2_9STRA (RRM domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1V2_9STRA)

HSP 1 Score: 227 bits (578), Expect = 4.190e-67
Identity = 110/174 (63.22%), Postives = 137/174 (78.74%), Query Frame = 1 
Query:   13 MNVVQEIRRINERELQQGLSG-KASWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRERAEKLEEERLAKGEEPSAKGAQWRPGIAYEGKQLATAENFHKGVDVFAAPDKG 531
            MNVV+EI+R+NE+ELQ+G +G + SWH +YKDSAWV+VG     L+EGD+LCVMSQWGEIED++L R+K TGKSKGF F+KYEDQRSTILAVDN NGI LL RT+RVDHK KY+LP EV E+AE+ E+ RL  GE+    G +W+PG AYEGK+L    +  KGVD+FA   +G
Sbjct:    1 MNVVREIQRLNEKELQRGTAGMEGSWHGQYKDSAWVFVGSLPLQLSEGDVLCVMSQWGEIEDLHLVRDKGTGKSKGFAFLKYEDQRSTILAVDNMNGIKLLERTLRVDHKEKYALPKEVLEKAEEKEKARLEAGEDGGGGGPRWKPGHAYEGKELVEGHDLSKGVDLFAPVQEG 174
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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: A0A7S3YEY6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEY6_HETAK)

HSP 1 Score: 207 bits (527), Expect = 3.970e-61
Identity = 101/168 (60.12%), Postives = 132/168 (78.57%), Query Frame = 1 
Query:   13 MNVVQEIRRINERELQQGLSGK-ASWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRERAEKLEEERLAKGEEPSAKGAQWRPGIAYEGKQLATAENFHKGVDVF 513
            MNV+QEI+RIN+REL+ GL+G  ASWH +YK+SAWVYVG   Y LTEGD+LC MSQWGEIEDIN  R+KDTGK KGF F+KYEDQRST+LAVDNFNGI+L+ RT+RVDH  KY LP EV+++ ++LEE+    G++  +  +++ PG AY+  +LA+  +  KG D+F
Sbjct:    1 MNVIQEIKRINDRELEAGLTGTDASWHSKYKNSAWVYVGSIPYALTEGDILCFMSQWGEIEDINYVRDKDTGKPKGFAFVKYEDQRSTVLAVDNFNGIELVDRTLRVDHCEKYRLPKEVQDKEDQLEEDAKLLGKQHDS-SSKFGPGHAYKDMELASKYDIAKGQDLF 167
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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: W4H400_9STRA (RRM domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=W4H400_9STRA)

HSP 1 Score: 207 bits (526), Expect = 5.600e-61
Identity = 102/167 (61.08%), Postives = 126/167 (75.45%), Query Frame = 1 
Query:   13 MNVVQEIRRINERELQQGLSGKASWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRERAEKLEEERLAKGEEPSAKGAQWRPGIAYEGKQLATAENFHKGVDVF 513
            MNV++EI+R+NE+EL+QG+S + SWHH Y+DSAWVYVGG  YDLTEGD+LCV SQ GEIEDINL R+KDTGKS GF FIKYE+  ST+LAVDNFNG  LL R +RVDH HKY LP E+R++     EE +    +   +G   +PG AYEGK+L    + H+GVDVF
Sbjct:    1 MNVIKEIQRLNEQELEQGVSIEGSWHHIYRDSAWVYVGGLSYDLTEGDILCVFSQVGEIEDINLVRDKDTGKSMGFSFIKYENHLSTVLAVDNFNGSTLLERLLRVDHVHKYKLPKELRDK-----EENVVADHDDELRG---KPGHAYEGKELENKFDIHQGVDVF 159
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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: A0A485KUA3_9STRA (Aste57867_11943 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUA3_9STRA)

HSP 1 Score: 204 bits (520), Expect = 4.680e-60
Identity = 100/167 (59.88%), Postives = 126/167 (75.45%), Query Frame = 1 
Query:   13 MNVVQEIRRINERELQQGLSGKASWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRERAEKLEEERLAKGEEPSAKGAQWRPGIAYEGKQLATAENFHKGVDVF 513
            MNV++EI+R+NE+EL+QG+  + SWHH Y+DSAWVY+GG  Y+LTEGD+LCV SQ GEIEDINL R+KD+GKS GF FIKYE   ST+LAVDNFNG  LL R +RVDH HKY LP E+R++ + ++E      E    +G   RPG AYEGK+LA   + H+GVDVF
Sbjct:    1 MNVIKEIQRLNEQELEQGVGYEGSWHHIYRDSAWVYIGGLSYELTEGDILCVFSQVGEIEDINLVRDKDSGKSMGFCFIKYEHHMSTVLAVDNFNGSSLLERMLRVDHVHKYKLPKELRDKEDNVDE---PVDENDEMRG---RPGHAYEGKELANKYDIHEGVDVF 161
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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: A0A024UQN5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQN5_9STRA)

HSP 1 Score: 207 bits (526), Expect = 1.070e-59
Identity = 104/167 (62.28%), Postives = 126/167 (75.45%), Query Frame = 1 
Query:   13 MNVVQEIRRINERELQQGLSGKASWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRERAEKLEEERLAKGEEPSAKGAQWRPGIAYEGKQLATAENFHKGVDVF 513
            MNV++EI+R+NE+EL+QG+  + SWHH Y+DSAWVYVGG  Y+LTEGD+LCV SQ GEIEDINL R+KDTGKS GF FIKYE+  ST+LAVDNFNG  LL R +RVDH HKY LP E+R++    EE  +A  EE   K     PG AYEGK+LA   + H+GVDVF
Sbjct:    1 MNVIKEIQRLNEQELEQGVGIEGSWHHIYRDSAWVYVGGLSYELTEGDILCVFSQVGEIEDINLVRDKDTGKSMGFSFIKYENHLSTVLAVDNFNGSTLLERMLRVDHVHKYKLPKELRDK----EENEVADDEELRGK-----PGHAYEGKELANKFDIHQGVDVF 158
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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: T0R8P5_SAPDV (RRM domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R8P5_SAPDV)

HSP 1 Score: 203 bits (516), Expect = 2.220e-59
Identity = 98/167 (58.68%), Postives = 126/167 (75.45%), Query Frame = 1 
Query:   13 MNVVQEIRRINERELQQGLSGKASWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRERAEKLEEERLAKGEEPSAKGAQWRPGIAYEGKQLATAENFHKGVDVF 513
            MNV++EI R+N++EL QG+S + SWHH Y++SAWVYVGG  Y+LTEGD+LCV SQ GEIEDINL R+KDTGKS GF F+KYED RST+LAVDNFNG  LL R +RVDH HKY LP E+R++ + ++++          +G   + G AY+ K+LAT  + HKGVDVF
Sbjct:    1 MNVIKEIERLNQQELDQGVSYEGSWHHIYRESAWVYVGGLSYELTEGDVLCVFSQVGEIEDINLVRDKDTGKSMGFAFLKYEDHRSTVLAVDNFNGSSLLERLLRVDHVHKYKLPKELRDKEDGVDDDDALDDAIDELRG---QAGHAYKDKELATKFDIHKGVDVF 164
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BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Match: A0A1V9ZVW6_9STRA (U2 snRNP component IST3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVW6_9STRA)

HSP 1 Score: 199 bits (505), Expect = 2.330e-59
Identity = 97/168 (57.74%), Postives = 123/168 (73.21%), Query Frame = 1 
Query:   13 MNVVQEIRRINERELQQGLSGKASWHHEYKDSAWVYVGGFRYDLTEGDLLCVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLLGRTVRVDHKHKYSLPAEVRER--AEKLEEERLAKGEEPSAKGAQWRPGIAYEGKQLATAENFHKGVDV 510
            MNVV+EI R+N++EL QG+  + SWH+ Y+DSAW+YVG   Y+L+EGD+LCV SQ+GEIEDINL R+K+TGKS GF FIKYED RST+LAVDNFNG  LL RT+RVDH HKY LP E+R++  A+  EEE   +G+          PG AY+GK L    + H+GVD 
Sbjct:    1 MNVVKEIERLNQQELDQGIGYEGSWHYIYRDSAWIYVGSLSYELSEGDVLCVFSQFGEIEDINLVRDKETGKSMGFAFIKYEDHRSTVLAVDNFNGSTLLERTLRVDHVHKYKLPKEIRDKEDAQDFEEEEKLRGQ----------PGHAYKGKDLENKYDIHQGVDT 158
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10079.114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPK4_ECTSI3.440e-11657.72RRM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YJH4_9STRA4.020e-6962.57RRM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2RL84_9STRA7.830e-6860.87Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A4D9D1V2_9STRA4.190e-6763.22RRM domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A7S3YEY6_HETAK3.970e-6160.12Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W4H400_9STRA5.600e-6161.08RRM domain-containing protein n=3 Tax=Aphanomyces ... [more]
A0A485KUA3_9STRA4.680e-6059.88Aste57867_11943 protein n=1 Tax=Aphanomyces stella... [more]
A0A024UQN5_9STRA1.070e-5962.28Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
T0R8P5_SAPDV2.220e-5958.68RRM domain-containing protein n=2 Tax=Saprolegnia ... [more]
A0A1V9ZVW6_9STRA2.330e-5957.74U2 snRNP component IST3 n=1 Tax=Thraustotheca clav... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10079contigD-dudresnayi_contig10079:5881..8418 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score357.1
Seed ortholog evalue1.1e-95
Seed eggNOG ortholog2880.D7FPK4
Preferred nameRBMX2
KEGG koko:K07919,ko:K13107,ko:K14807
GOsGO:0000245,GO:0000349,GO:0000375,GO:0000377,GO:0000393,GO:0000398,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005686,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006366,GO:0006396,GO:0006397,GO:0006401,GO:0006403,GO:0006405,GO:0006406,GO:0006417,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0007623,GO:0008104,GO:0008150,GO:0008152,GO:0008380,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009299,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0010638,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031503,GO:0031974,GO:0031981,GO:0032204,GO:0032206,GO:0032268,GO:0032270,GO:0032501,GO:0032774,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0034248,GO:0034250,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0042162,GO:0042752,GO:0042789,GO:0042886,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043487,GO:0043488,GO:0043565,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045184,GO:0045727,GO:0045893,GO:0045935,GO:0046483,GO:0046700,GO:0046907,GO:0048511,GO:0048518,GO:0048522,GO:0050657,GO:0050658,GO:0050789,GO:0050790,GO:0050794,GO:0051028,GO:0051052,GO:0051054,GO:0051128,GO:0051130,GO:0051168,GO:0051169,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051338,GO:0051347,GO:0051641,GO:0051649,GO:0051972,GO:0051973,GO:0060255,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070274,GO:0070727,GO:0071011,GO:0071013,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097167,GO:0097525,GO:0097659,GO:0120114,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902494,GO:1902680,GO:1903311,GO:1903506,GO:1903508,GO:1904353,GO:1904355,GO:1905661,GO:1905663,GO:1990904,GO:2000112,GO:2000278,GO:2000573,GO:2001141,GO:2001252
EggNOG free text desc.mRNA-containing ribonucleoprotein complex export from nucleus
EggNOG OGsKOG0126@1,KOG0126@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko03041,ko04031,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-12_000920.1
Exons4
Model size1176
Cds size1164
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10079.114.1prot_D-dudresnayi_contig10079.114.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10079 5881..8406 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927508.4698734-CDS-D-dudresnayi_contig10079:5880..65281622927508.4698734-CDS-D-dudresnayi_contig10079:5880..6528Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10079 5881..6528 -
1690556783.9952786-CDS-D-dudresnayi_contig10079:5880..65281690556783.9952786-CDS-D-dudresnayi_contig10079:5880..6528Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10079 5881..6528 -
1622927508.4969583-CDS-D-dudresnayi_contig10079:6935..71001622927508.4969583-CDS-D-dudresnayi_contig10079:6935..7100Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10079 6936..7100 -
1690556784.0050128-CDS-D-dudresnayi_contig10079:6935..71001690556784.0050128-CDS-D-dudresnayi_contig10079:6935..7100Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10079 6936..7100 -
1622927508.515431-CDS-D-dudresnayi_contig10079:7648..77771622927508.515431-CDS-D-dudresnayi_contig10079:7648..7777Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10079 7649..7777 -
1690556784.0127966-CDS-D-dudresnayi_contig10079:7648..77771690556784.0127966-CDS-D-dudresnayi_contig10079:7648..7777Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10079 7649..7777 -
1622927508.5312815-CDS-D-dudresnayi_contig10079:8184..84061622927508.5312815-CDS-D-dudresnayi_contig10079:8184..8406Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10079 8185..8406 -
1690556784.0206587-CDS-D-dudresnayi_contig10079:8184..84061690556784.0206587-CDS-D-dudresnayi_contig10079:8184..8406Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10079 8185..8406 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927508.5442338-UTR-D-dudresnayi_contig10079:8406..84181622927508.5442338-UTR-D-dudresnayi_contig10079:8406..8418Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10079 8407..8418 -
1690556784.030521-UTR-D-dudresnayi_contig10079:8406..84181690556784.030521-UTR-D-dudresnayi_contig10079:8406..8418Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10079 8407..8418 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10079.114.1

>prot_D-dudresnayi_contig10079.114.1 ID=prot_D-dudresnayi_contig10079.114.1|Name=mRNA_D-dudresnayi_contig10079.114.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=388bp
MNVVQEIRRINERELQQGLSGKASWHHEYKDSAWVYVGGFRYDLTEGDLL
CVMSQWGEIEDINLCREKDTGKSKGFGFIKYEDQRSTILAVDNFNGIDLL
GRTVRVDHKHKYSLPAEVRERAEKLEEERLAKGEEPSAKGAQWRPGIAYE
GKQLATAENFHKGVDVFAAPDKGPGSSDDSDGPGVRGESSAAKRERREAK
RARKEARREARGHKKHKGDRRDSAEYRKKHKMKKYKKDDRGTGRDRQQET
STADYRNGRDRAEANGHGERRDGRERGSTAIAGRASGGGGGGADAAGAWE
RGARSSGDAPFGASFNSSAPPRQGDAPAPLSTGNVLDWRGLGGRGAGGRG
GRGRETGRGGKEGGRGGGRGGRGGEERNSLGGMDRRR*
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mRNA from alignment at D-dudresnayi_contig10079:5881..8418-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10079.114.1 ID=mRNA_D-dudresnayi_contig10079.114.1|Name=mRNA_D-dudresnayi_contig10079.114.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2538bp|location=Sequence derived from alignment at D-dudresnayi_contig10079:5881..8418- (Desmarestia dudresnayi DdudBR16 monoicous)
TAGCGCCTCAGCATGAACGTCGTGCAGGAAATTAGGCGCATTAATGAGAG
AGAACTTCAACAAGGTTTGTCTGGAAAGGCGTCGTGGCACCATGAGTACA
AAGACAGTGCCTGGGTGTATGTCGGGGGCTTTCGGTACGACCTGACAGAG
GGCGACCTGCTGTGCGTGATGTCGCAGTGGGGAGAGATCGAGGACATCAA
TCTGTGCAGAGAGAAGGACACCGGAAAATCTAAGGTGAGAGGGTGTGACA
TCGATGTTGTAAACTTCACACGTTTCGTGACAACATGAAATGGCCCTGTG
CGCACTCAAACTGCATGGAAGGAATCTCTCTGTTCAACAACTCGTACGCA
ATGTTATACCAGTAAGGTACAACAGTAGTAGTAGTATAATAGTACTCGTA
CATACTGGCGCATCATAGATTTATGAACAGTACAACGTATAGTACCGTAG
TACCTGTGATTACTGACTGCTAGTCCTATCATACTTGCATTACAGTAGTA
GTTGCACGAGTACGTCGTAGCAGGTTATAATACTGTACTGCACACAACCT
TACAGTGGCAATCTACCCTAAAGAGTATAGATATAGAATTGGCACCGTCT
GACTGCGCTTGTTGAGCCTTGCACCTTCTGATCCGGCTCAGGGCTTCGGC
TTCATCAAGTACGAGGACCAAAGGAGCACTATCCTGGCGGTGGACAATTT
CAACGGGATTGACCTACTGGGGCGGACGGTTCGAGTCGATCACAAACACA
AGTACTCCCTGCCTGCAGAGGTACGAACCCATTTGCGCGGTTGCGCGGTG
AGCGGTAATCCATGTCGCTTTTTTCTTTTTTTTTAGTCCACTGCAGAAAC
CATCGTTCACTGCTGGCAGTATGTCATGTTTGGTTTATTTTGCTTCTCGC
GGCGTACGTTCAAATCCACATCGCGTTAACTCTGCAGTGTGTTTAGGCCC
TTGGGTTCCCGTCTCGTATCTGAGAGTGAAGGTCGCACCCACGACGACTG
TTGTTGTACACAACGCTGGACCCAGTCGTACACAAATTTCACAAATTTTC
GGCGAAGTGCGACAAGTAGAGAAATGGACGCCAAGTGTGGTTGAGATTCC
ACGACGGAGCAGTCTTACTGGCCGGGATAACTTATTTGTAGTGCACTCCC
AGCTGTCCGAGTATTAGTACTACTGTAGCATGGCAGTCTCCAGTACTAAG
GGCTGAAAGGCGTAACCACACAGTTTTGCTACTCGTCGAGCGGGAGGAAT
TGAGCCCATAAAACAGATCCAAGTTCCGAAATGTTTTATGTGGTGTGTGT
GTGTGGTACATATCATAGGTTCGCGAGAGAGCGGAGAAACTGGAAGAAGA
GAGGTTGGCGAAGGGCGAGGAGCCTTCGGCGAAAGGGGCGCAGTGGAGAC
CAGGCATCGCTTACGAGGGCAAGCAGCTCGCCACGGCAGAAAACTTTCAC
AAGGGCGTCGACGTGTTCGCCGCGCCCGACAAGGTGAGTCGCTCGTAGAA
GCATACTTCAGTATAATACGAGTACACCAACAACTAGCTATAAACAGAGA
GCCTACACGGTACAGCTATCTTGGGGAGGCGAGTATATCTCCCGCCTTGA
AGTTTGAAGAGGTACGACAGCTCTAATGCGATGCTGCTTGTGTTTTCTTC
CGTAGTGGTCTCCCGCGTCGCCGAGCAGCTTTCCTTTCGTAGTCTCCTTT
TCCCTTGCCAGTGTGTGGTCTGCGGTCTTGCGCCCAGGTACTGACTACTG
ACTGTCCTTGTGGCTACGCAGACGATCTTCTTTGCACTGGCGGCTTTTCG
CGCGCAGTTTCTGATGATGTAGATGGGCGGCACACCCTTGACGCGTGCTG
TGTTTCTTTCATGCCTGATGGTGGCGACGTTTGTGTGCAGGGCCCTGGAT
CCAGCGACGACAGCGACGGCCCAGGCGTGCGGGGCGAGTCGTCCGCTGCA
AAGCGCGAACGGCGAGAGGCGAAGAGGGCGCGAAAGGAGGCCAGGAGGGA
GGCACGAGGGCACAAGAAGCACAAGGGCGACAGGAGGGACTCTGCAGAGT
ACCGCAAGAAACACAAAATGAAGAAGTACAAGAAAGACGACAGGGGCACA
GGGCGAGATCGGCAACAAGAAACTTCCACGGCTGATTACCGGAACGGAAG
AGACAGGGCAGAGGCCAACGGGCACGGCGAGAGACGGGATGGACGAGAGA
GAGGCTCGACCGCAATTGCGGGACGAGCCTCTGGCGGCGGCGGCGGCGGT
GCAGATGCGGCCGGCGCGTGGGAACGCGGTGCACGGTCCTCTGGTGATGC
CCCCTTCGGTGCCTCTTTCAACTCCTCTGCGCCTCCGCGCCAGGGCGACG
CACCAGCTCCCCTGTCAACCGGAAACGTGTTGGATTGGAGGGGGCTAGGG
GGGCGTGGCGCGGGTGGGCGTGGGGGGAGAGGTAGGGAAACTGGTCGAGG
AGGAAAGGAAGGGGGGCGCGGGGGTGGACGAGGTGGGCGTGGAGGTGAAG
AGAGGAACTCGTTGGGAGGTATGGACCGCCGACGATAG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10079:5881..8418-

>mRNA_D-dudresnayi_contig10079.114.1 ID=mRNA_D-dudresnayi_contig10079.114.1|Name=mRNA_D-dudresnayi_contig10079.114.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2328bp|location=Sequence derived from alignment at D-dudresnayi_contig10079:5881..8418- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGAACGTCGTGCAGGAAATTAGGCGCATTAATGAGAGAGAACTTCAACA
AGGTTTGTCTGGAAAGGCGTCGTGGCACCATGAGTACAAAGACAGTGCCT
GGGTGTATGTCGGGGGCTTTCGGTACGACCTGACAGAGGGCGACCTGCTG
TGCGTGATGTCGCAGTGGGGAGAGATCGAGGACATCAATCTGTGCAGAGA
GAAGGACACCGGAAAATCTAAGATGAACGTCGTGCAGGAAATTAGGCGCA
TTAATGAGAGAGAACTTCAACAAGGTTTGTCTGGAAAGGCGTCGTGGCAC
CATGAGTACAAAGACAGTGCCTGGGTGTATGTCGGGGGCTTTCGGTACGA
CCTGACAGAGGGCGACCTGCTGTGCGTGATGTCGCAGTGGGGAGAGATCG
AGGACATCAATCTGTGCAGAGAGAAGGACACCGGAAAATCTAAGGGCTTC
GGCTTCATCAAGTACGAGGACCAAAGGAGCACTATCCTGGCGGTGGACAA
TTTCAACGGGATTGACCTACTGGGGCGGACGGTTCGAGTCGATCACAAAC
ACAAGTACTCCCTGCCTGCAGAGGGCTTCGGCTTCATCAAGTACGAGGAC
CAAAGGAGCACTATCCTGGCGGTGGACAATTTCAACGGGATTGACCTACT
GGGGCGGACGGTTCGAGTCGATCACAAACACAAGTACTCCCTGCCTGCAG
AGGTTCGCGAGAGAGCGGAGAAACTGGAAGAAGAGAGGTTGGCGAAGGGC
GAGGAGCCTTCGGCGAAAGGGGCGCAGTGGAGACCAGGCATCGCTTACGA
GGGCAAGCAGCTCGCCACGGCAGAAAACTTTCACAAGGGCGTCGACGTGT
TCGCCGCGCCCGACAAGGTTCGCGAGAGAGCGGAGAAACTGGAAGAAGAG
AGGTTGGCGAAGGGCGAGGAGCCTTCGGCGAAAGGGGCGCAGTGGAGACC
AGGCATCGCTTACGAGGGCAAGCAGCTCGCCACGGCAGAAAACTTTCACA
AGGGCGTCGACGTGTTCGCCGCGCCCGACAAGGGCCCTGGATCCAGCGAC
GACAGCGACGGCCCAGGCGTGCGGGGCGAGTCGTCCGCTGCAAAGCGCGA
ACGGCGAGAGGCGAAGAGGGCGCGAAAGGAGGCCAGGAGGGAGGCACGAG
GGCACAAGAAGCACAAGGGCGACAGGAGGGACTCTGCAGAGTACCGCAAG
AAACACAAAATGAAGAAGTACAAGAAAGACGACAGGGGCACAGGGCGAGA
TCGGCAACAAGAAACTTCCACGGCTGATTACCGGAACGGAAGAGACAGGG
CAGAGGCCAACGGGCACGGCGAGAGACGGGATGGACGAGAGAGAGGCTCG
ACCGCAATTGCGGGACGAGCCTCTGGCGGCGGCGGCGGCGGTGCAGATGC
GGCCGGCGCGTGGGAACGCGGTGCACGGTCCTCTGGTGATGCCCCCTTCG
GTGCCTCTTTCAACTCCTCTGCGCCTCCGCGCCAGGGCGACGCACCAGCT
CCCCTGTCAACCGGAAACGTGTTGGATTGGAGGGGGCTAGGGGGGCGTGG
CGCGGGTGGGCGTGGGGGGAGAGGTAGGGAAACTGGTCGAGGAGGAAAGG
AAGGGGGGCGCGGGGGTGGACGAGGTGGGCGTGGAGGTGAAGAGAGGAAC
TCGTTGGGAGGTATGGACCGCCGACGATAGGGCCCTGGATCCAGCGACGA
CAGCGACGGCCCAGGCGTGCGGGGCGAGTCGTCCGCTGCAAAGCGCGAAC
GGCGAGAGGCGAAGAGGGCGCGAAAGGAGGCCAGGAGGGAGGCACGAGGG
CACAAGAAGCACAAGGGCGACAGGAGGGACTCTGCAGAGTACCGCAAGAA
ACACAAAATGAAGAAGTACAAGAAAGACGACAGGGGCACAGGGCGAGATC
GGCAACAAGAAACTTCCACGGCTGATTACCGGAACGGAAGAGACAGGGCA
GAGGCCAACGGGCACGGCGAGAGACGGGATGGACGAGAGAGAGGCTCGAC
CGCAATTGCGGGACGAGCCTCTGGCGGCGGCGGCGGCGGTGCAGATGCGG
CCGGCGCGTGGGAACGCGGTGCACGGTCCTCTGGTGATGCCCCCTTCGGT
GCCTCTTTCAACTCCTCTGCGCCTCCGCGCCAGGGCGACGCACCAGCTCC
CCTGTCAACCGGAAACGTGTTGGATTGGAGGGGGCTAGGGGGGCGTGGCG
CGGGTGGGCGTGGGGGGAGAGGTAGGGAAACTGGTCGAGGAGGAAAGGAA
GGGGGGCGCGGGGGTGGACGAGGTGGGCGTGGAGGTGAAGAGAGGAACTC
GTTGGGAGGTATGGACCGCCGACGATAG
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