prot_D-dudresnayi_contig10037.71.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig10037.71.1
Unique Nameprot_D-dudresnayi_contig10037.71.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length167
Homology
BLAST of mRNA_D-dudresnayi_contig10037.71.1 vs. uniprot
Match: D8LD49_ECTSI (DNA polymerase epsilon subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD49_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 1.900e-87
Identity = 145/167 (86.83%), Postives = 156/167 (93.41%), Query Frame = 0
Query:    1 MSTAQAVFRAFKLQGLGIRADAAKAVVRVVDHEEDVDGAVQAIIRATKARIERNELGSNVVDVDTVSAVVAGLSSREQDLTDSSTQTQSAFLRPRLYFDPVRNTLLLEDAGSRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIDSSRREYIMLSPLDSLV 167
            MS+AQAVFRAFKLQGLG+RADAA+A+VRVV+ EE  D AVQAIIR+ KARIERNEL SNVVDVDTVSAVVA L+SREQDL DSSTQ Q+AF+RPRLYFDPVRNTLLLEDAG+RKRSMHGPAESKARMYRERFLMVRQRV RHDLFRPPII+SSRREYI LSPLDSLV
Sbjct:    1 MSSAQAVFRAFKLQGLGLRADAARAIVRVVEREEGADEAVQAIIRSVKARIERNELSSNVVDVDTVSAVVADLTSREQDLADSSTQMQNAFVRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVQRHDLFRPPIIESSRREYIKLSPLDSLV 167          
BLAST of mRNA_D-dudresnayi_contig10037.71.1 vs. uniprot
Match: A0A835YQA3_9STRA (DNA polymerase epsilon subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQA3_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.390e-31
Identity = 71/167 (42.51%), Postives = 106/167 (63.47%), Query Frame = 0
Query:    1 MSTAQAVFRAFKLQGLGIRADAAKAVVRVVDHEEDVDGAVQAIIRATKARIERNELGSNVVDVDTVSAVVAGLSSREQDLTDSSTQTQSAFLRPRLYFDPVRNTLLLEDAGSRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIDSSRREYIMLSPLDSLV 167
            M   + + +AF+LQGL +  +A KA++ V++ EED   A+ A+I A K +IER EL S V+D   V+AV   LS+ E DL  +S +  +AF   RL++DP+R +L  E    R   +H   E+K  M R+R L+++QR  RH+LFR P+I SSR++ I L+ LDSL+
Sbjct:    1 MGLMRQIAQAFRLQGLQLTGEAMKAIISVIESEEDSAAALGAVISAIKDKIERKELRSTVIDEAAVAAVAIDLSNTEDDLARASLKVLNAFEGARLWYDPLRKSLQWETQEQRTSVLHAGPEAKGEMLRDRLLLMQQRTQRHELFRAPVIASSRKDTIKLTSLDSLL 167          
BLAST of mRNA_D-dudresnayi_contig10037.71.1 vs. uniprot
Match: A0A4D9DAB7_9STRA (DNA polymerase II subunit 2 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAB7_9STRA)

HSP 1 Score: 117 bits (292), Expect = 3.930e-28
Identity = 70/163 (42.94%), Postives = 100/163 (61.35%), Query Frame = 0
Query:    5 QAVFRAFKLQGLGIRADAAKAVVRVVDHEEDVDGAVQAIIRATKARIERNELGSNVVDVDTVSAVVAGLSSREQDLTDSSTQTQSAFLRPRLYFDPVRNTLLLEDAGSRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIDSSRREYIMLSPLDSLV 167
            +A+FRAFKL+GL ++ADA  A+V V+ HEEDVDGA+ AI+ A K  +ER EL S +VD  T+  VV  L+  E DL   +     AF  P++ +D    +        ++R  +    S+ARM+RER+ +VRQRV RH+LF  PI+   R  Y+ L  +DSL+
Sbjct:   15 RAIFRAFKLRGLSVKADAVAALVSVLTHEEDVDGALDAILNAIKGLVERGELRSTLVDRATIETVVRQLTKDEDDLNQEAIAIWDAFSMPKMTYDHRSKSFSF--TFDKERPFNPDPGSRARMFRERYALVRQRVLRHELFVRPIMGHDRN-YLKLVTVDSLL 174          
BLAST of mRNA_D-dudresnayi_contig10037.71.1 vs. uniprot
Match: W7TY64_9STRA (Dna-directed dna polymerase epsilon 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TY64_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.850e-18
Identity = 45/95 (47.37%), Postives = 62/95 (65.26%), Query Frame = 0
Query:    5 QAVFRAFKLQGLGIRADAAKAVVRVVDHEEDVDGAVQAIIRATKARIERNELGSNVVDVDTVSAVVAGLSSREQDLTDSSTQTQSAFLRPRLYFD 99
            +A+FRAFKL+GL ++ADA  A+V V+ HEEDVDGA+ AI+ A K  +ER EL S +VD  T+  VV  L+  E DL   +     AF  P++ +D
Sbjct:   15 RAIFRAFKLRGLSVKADAVAALVSVLTHEEDVDGALDAILNAIKGLVERGELRSTLVDRATIETVVRQLTKDEDDLNQEAIAIWDAFSMPKMTYD 109          
BLAST of mRNA_D-dudresnayi_contig10037.71.1 vs. uniprot
Match: A0A1V9YX49_9STRA (DNA polymerase epsilon subunit n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YX49_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.330e-16
Identity = 58/169 (34.32%), Postives = 97/169 (57.40%), Query Frame = 0
Query:    1 MSTAQAVFRAFKLQGLGIRADAAKAVVRVVDHEEDVDGAVQAIIRATKARIERNELGSNVVDVDTVSAVVAGLSSREQDLTDSSTQTQSAFLRPRLYFDPVRNTLLLEDAGSRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPII--DSSRREYIMLSPLDSLV 167
            M+ A+ VFRAFKLQGL + ADA K ++R +D +  V   ++ +I A K  I+R++L ++VV  + + + +  L S   +    + Q  SA  +P+L ++ +  T   E    R R +H   E +  ++RERF  V +RV RH  F  P++   S +REY+ L+ ++SL+
Sbjct:    1 MAAAKQVFRAFKLQGLTLHADALKRLLREMDEQPSV--LLEDVIYAIKNSIDRSKLTNSVVTQEALESALDTLLSVSTENDYQAIQVFSALEQPKLRYESLSKTY--EVVADRGRRLHAAPEYRVNLFRERFAAVERRVRRHKTFSKPVMATTSLQREYLELTRIESLL 165          
BLAST of mRNA_D-dudresnayi_contig10037.71.1 vs. uniprot
Match: A0A7S0MZV0_9CHLO (DNA polymerase epsilon subunit n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MZV0_9CHLO)

HSP 1 Score: 77.4 bits (189), Expect = 1.640e-13
Identity = 58/171 (33.92%), Postives = 90/171 (52.63%), Query Frame = 0
Query:    1 MSTAQAVFRAFKLQGLGIRADAAKAVVRVVDHEE-DVDGAVQAIIRATKARIERNELGSNVVDVDTVSAVVAGL-SSREQDLTDSSTQTQSAFLRPRLYFDPVRNTLLLEDAGSRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIID--SSRREYIMLSPLDSLV 167
            M   +AV   F+  GL +R D+ K V   VD +   V+ A + ++ A    +E+ EL S ++DV+TV  ++  L     QD  DS+T    AF  P+  +DP++         S K  M G A +K  +Y+ER +++R RV R+ LF  P  +  SSRREY  L+ +  L+
Sbjct:    3 MEVQKAVHAEFRRHGLSLRRDSVKLVAAYVDDQHVSVEDAAELMLNA----LEKQELKSTILDVETVEKLIGDLLEGVVQD--DSATHVIGAFDMPKFNYDPIKKAFYKV---STKPDMFGDANAKISLYQERLMILRNRVSRNKLFAKPSFELSSSRREYCELTSVQGLM 164          
BLAST of mRNA_D-dudresnayi_contig10037.71.1 vs. uniprot
Match: A0A8C9VIE7_SCLFO (DNA polymerase epsilon subunit n=9 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9VIE7_SCLFO)

HSP 1 Score: 74.3 bits (181), Expect = 1.970e-12
Identity = 45/149 (30.20%), Postives = 85/149 (57.05%), Query Frame = 0
Query:   11 FKLQGLGIRADAAKAVVRVVDH--EEDVDGAVQAIIRATKARIERNELGSNVVDVDTVSAVVAGLSSREQDLTDSSTQTQSAFLRPRLYFDPVRNTLL-LEDAGSRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIDSSRRE 156
            F+++GL +R +++K +V V+    E+++D A++ ++ A    +E+  L S+++++  V   V   S    + TD+      AF  PR  +   R   + L  +   + S+ G A  KA ++RER+ +++QR+HRH+LF PP+I S+  E
Sbjct:   17 FQMRGLTLRPESSKYLVEVLQSVSEQELDDAIERVLDA----VEKQPLSSSMIELSVVEIAVHECSQLNDETTDNVFNIIGAFDVPRFIYSTERKKFVPLAMSNHPRPSLCGTARDKAELFRERYTVLQQRIHRHELFTPPVIGSAPDE 161          
BLAST of mRNA_D-dudresnayi_contig10037.71.1 vs. uniprot
Match: A0A067C3B3_SAPPC (DNA polymerase epsilon subunit n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067C3B3_SAPPC)

HSP 1 Score: 73.9 bits (180), Expect = 2.610e-12
Identity = 51/166 (30.72%), Postives = 91/166 (54.82%), Query Frame = 0
Query:    4 AQAVFRAFKLQGLGIRADAAKAVVRVVDHEEDVDGAVQAIIRATKARIERNELGSNVVDVDTVSAVVAGLSSREQDLTDSSTQTQSAFLRPRLYFDPVRNTLLLEDAGSRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIDSSR--REYIMLSPLDSLV 167
            A+ VFRAFKLQGL + ADA K ++  ++ E  +   +  ++ A K  I+R++L ++VV ++ + + +  L S   +    S Q   AF  P L ++ +  T  +     R R +H     +  ++R RF  + +RV RH  F  P++ S++  REY+ L+ ++SL+
Sbjct:    5 AKQVFRAFKLQGLTLHADALKRLLHEMEMEPTL--GLDDVLFAIKNSIDRSKLINSVVTIEALESALDTLLSVSAENDYQSIQVFDAFEMPSLQYEAMTKTYSV--GLDRHRRLHASPNYRVNLFRNRFAAIERRVRRHKTFSKPVMASAKLQREYLELTRIESLL 166          
BLAST of mRNA_D-dudresnayi_contig10037.71.1 vs. uniprot
Match: A0A2P5B8S7_TREOI (DNA polymerase II subunit 2 n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5B8S7_TREOI)

HSP 1 Score: 72.0 bits (175), Expect = 1.120e-11
Identity = 57/179 (31.84%), Postives = 90/179 (50.28%), Query Frame = 0
Query:    2 STAQAVFRAFKLQGLGIRADAAKAVVRVVDH--EEDVDGAVQAIIRATKARIERNELGSNVVDVDTVSAVVAGLSSREQDLTDSSTQTQS---------AFLRPRLYFDPVRNTLLLEDAGSRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIDSSRREY--IMLSPLDSLV 167
            +T + V R  K++G  ++ DA   ++  V    + D D A+  ++     ++    L S ++D D V AVV  L   E  + D+S  T +         AFL P+L +DP++  L  E  GS    +HG A +KA +YR+RFL++ QR+ R   F  P  DS    +    +SP+ SLV
Sbjct:    5 TTRKKVQRRCKIRGYSLKVDALDDILSFVSRFPDADADDAIDLLLD----QLHNQTLKSPIIDKDAVRAVVTLLLEAEAAVDDTSNPTAATTSAIRVVDAFLLPKLRYDPIKK-LFYEQTGSLP--IHGDASAKAALYRDRFLLLFQRLTRDQHFSKPAFDSEMSNFGNCEISPIQSLV 176          
BLAST of mRNA_D-dudresnayi_contig10037.71.1 vs. uniprot
Match: A0A6J2W0C5_CHACN (DNA polymerase epsilon subunit n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2W0C5_CHACN)

HSP 1 Score: 71.2 bits (173), Expect = 2.270e-11
Identity = 44/149 (29.53%), Postives = 79/149 (53.02%), Query Frame = 0
Query:   11 FKLQGLGIRADAAKAVVRVVD--HEEDVDGAVQAIIRATKARIERNELGSNVVDVDTVSAVVAGLSSREQDLTDSSTQTQSAFLRPRLYFDPVRNTLL-LEDAGSRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIDSSRRE 156
            FK++GL +R DA + +V V++  +E ++D  ++ I+ A    +E+  L S+++++      V   S    D  D+      AF  PR  +   R   + +      + S+ G A  KA ++RER+ +++QR HRH+LF PP++ S   E
Sbjct:   14 FKMRGLMLRPDACRYLVEVLESVNELELDDVIERILDA----VEKQPLSSSMIELSVAETAVQDCSQSSDDTIDNVFNIIGAFDVPRFIYSTERKKFVPISMTNHPQPSLCGQARDKAELFRERYTILQQRTHRHELFTPPVVGSDPGE 158          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10037.71.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD49_ECTSI1.900e-8786.83DNA polymerase epsilon subunit n=1 Tax=Ectocarpus ... [more]
A0A835YQA3_9STRA2.390e-3142.51DNA polymerase epsilon subunit n=1 Tax=Tribonema m... [more]
A0A4D9DAB7_9STRA3.930e-2842.94DNA polymerase II subunit 2 n=1 Tax=Nannochloropsi... [more]
W7TY64_9STRA1.850e-1847.37Dna-directed dna polymerase epsilon 2 n=1 Tax=Nann... [more]
A0A1V9YX49_9STRA1.330e-1634.32DNA polymerase epsilon subunit n=1 Tax=Achlya hypo... [more]
A0A7S0MZV0_9CHLO1.640e-1333.92DNA polymerase epsilon subunit n=1 Tax=Pyramimonas... [more]
A0A8C9VIE7_SCLFO1.970e-1230.20DNA polymerase epsilon subunit n=9 Tax=Scleropages... [more]
A0A067C3B3_SAPPC2.610e-1230.72DNA polymerase epsilon subunit n=3 Tax=Saprolegnia... [more]
A0A2P5B8S7_TREOI1.120e-1131.84DNA polymerase II subunit 2 n=2 Tax=Cannabaceae Ta... [more]
A0A6J2W0C5_CHACN2.270e-1129.53DNA polymerase epsilon subunit n=1 Tax=Chanos chan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016266DNA polymerase epsilon, subunit BPANTHERPTHR12708DNA POLYMERASE EPSILON SUBUNIT Bcoord: 3..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10037contigD-dudresnayi_contig10037:1739..7360 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10037.71.1mRNA_D-dudresnayi_contig10037.71.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig10037 1739..7383 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig10037.71.1 ID=prot_D-dudresnayi_contig10037.71.1|Name=mRNA_D-dudresnayi_contig10037.71.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=167bp
MSTAQAVFRAFKLQGLGIRADAAKAVVRVVDHEEDVDGAVQAIIRATKAR
IERNELGSNVVDVDTVSAVVAGLSSREQDLTDSSTQTQSAFLRPRLYFDP
VRNTLLLEDAGSRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPII
DSSRREYIMLSPLDSLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016266POLE2