mRNA_D-dudresnayi_contig991.28729.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
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Overview
Homology
BLAST of mRNA_D-dudresnayi_contig991.28729.1 vs. uniprot
Match: D7FHY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY2_ECTSI) HSP 1 Score: 223 bits (569), Expect = 2.960e-63 Identity = 201/409 (49.14%), Postives = 249/409 (60.88%), Query Frame = 1
Query: 112 GLSALVALATF-SPARSA-CDDITQYL-DIPEILDGDTTITLEVTTIDCAAPAFTER-ETVVIQGG-TLTLVSTET-VRFINMGFTVEDGAALVFDMPKTRFGPAETDSIEDADGYLLDVKEGGSATFLGKFVGKGVENAASMFFNEGAIEFKKAATFQDNGNVFRTXXXXXXXXXXXXXXXXSYLAIQNI-DSGFVRFSTTAIFDNNGDGMDGGDGCAVSNTDLDGTVIFRGDATFSNHNCDLAGAVSNTGMMKFYGKAYFNDNKASEYEEGTGGGFKNKM-------GSTIFKGAVQFNNNEVTEFGXXLAVEGXXXXXXXXXXXXXXXXXXXXXXFSVTYGQEFKFGEVVASGYGTLTFEKPSVVRYRDNKVSRTDVDTS-LAACTVGYVEDG-SSVIGFPDDDVC 1290
G AL+ALA S RS CDDI Y D+ + + D + V DC + E + I+ G TLT+ S E+ VRF+N+ F VE+GA+L+FDMP TR GP S E A ++ DV EGGS TF GKF V N S+F+N G+IEFK + F +NGNVFR+ XXXXXXXXXXXXXXX N + FVRFS TA F +N DG GCA+ N GT IFR DA FS+H+CD AVSNTG M+FYGKAYF+DN+ Y + TGGG N+ G +FK AVQFN N E+G +AV GXXXXXXXXXXXXXXXXXXXXXX VT G G++TFEKP VVR DN + + + + C++ YVE ++V+GF DD+C
Sbjct: 7 GRCALLALALMASTVRSQECDDIDAYFGDVSSVTEIDLGTIIRV---DCPSNDDAEELPYITIESGKTLTVKSEESFVRFVNLRFIVEEGASLIFDMPVTRVGPNSGQS-EGAGDFVFDVAEGGSLTFNGKFRASQVSNVRSVFYNRGSIEFKDDSLFNNNGNVFRSNXXXXXXXXXXXXXXXXXXXXXNDGEDSFVRFSKTATFIDNAGFFDGAWGCAIDNG---GTAIFRDDAVFSDHDCDEGAAVSNTGKMRFYGKAYFSDNR--NYRD-TGGGVLNRAVYDSDQAGDLVFKAAVQFNRN-TAEYGGGIAVTGXXXXXXXXXXXXXXXXXXXXXXXXVT-------------GDGSVTFEKPEVVRISDNTLLANEYNPDPITGCSLAYVEGNETTVVGFDFDDIC 391
BLAST of mRNA_D-dudresnayi_contig991.28729.1 vs. uniprot
Match: A0A6H5L091_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L091_9PHAE) HSP 1 Score: 223 bits (567), Expect = 7.560e-63 Identity = 151/410 (36.83%), Postives = 207/410 (50.49%), Query Frame = 1
Query: 109 WGLSALVALATFSPARSACDDITQYLDIPEILDGDTTITLE-VTTIDCA---APAFTE--RETVVIQGGTLTLVSTETVRFINMGFTVEDGAALVFDMPKTRFGP--AETDSIEDADGYLLDVKEGGSATFLGKFVGKGVENAASMFFNEGAIEFKKAATFQDNGNVFRTXXXXXXXXXXXXXXXXSYLAIQNIDSGFVRFSTTAIFDNNGDGMDGGDGCAVSNTDLDGTVIFRGDATFSNHNCDLAGAVSNTGMMKFYGKAYFNDNKASE------YEEGTGGGFKNKMGSTIFKGAVQFNNNEVTEFGXXLAVEGXXXXXXXXXXXXXXXXXXXXXXFSVTYGQEFKFGEVVASGYGTLTFEKPSVV-RYRDNKVSRTDVDTSLAACTVGYVEDGSSVIGFPDDDVCV 1293
W +VA + A +ACDD+ YL IP L GD I LE V++++CA A E E +VI GG++TL S+ VRF+N+ F V+ GA LVFDMP+T FGP A + + + ++V EG + TF+G V V NA + F+N G++EF++ A F+D VF + AIQNI SG++RFS +FD N D C++S D + ++ RGDA F NHNC G KFYGKAYFN+N + + GG G+ F GAVQFN+N FG L +E ++ G G A GTLTF++P VV R+ +N V + +CTVG+V D + VIGFP DD+CV
Sbjct: 5 WAAVVVVA-GILATASAACDDVDNYLGIPNPLTGDMEIDLEGVSSVECAEIETDAGNEILLEQIVIDGGSVTLKSSSYVRFVNIEFDVKPGATLVFDMPETYFGPNTARKEGTWYYNSFGMNVDEGATVTFVGGVVASDVSNAFTAFYNRGSMEFQETALFEDGTYVFYENQGTIKFRGDATFRNNRFHAIQNIFSGYIRFSKDVLFDGNSYETDIIGTCSLSCIDEESRIVVRGDAVFQNHNCPGVALWQLYGTTKFYGKAYFNNNSRDKTTFDYNLDGNLGGAVVVSGGTMTFNGAVQFNDNSAEAFGGGLGIE---------------DGDVIFKKWTTFDGNSADNGAAFAMTGGTLTFQEPKVVTRFTNNDVYENEYPVE-ESCTVGFVADEALVIGFPGDDICV 397 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig991.28729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig991.28729.1 >prot_D-dudresnayi_contig991.28729.1 ID=prot_D-dudresnayi_contig991.28729.1|Name=mRNA_D-dudresnayi_contig991.28729.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=404bp MIMGWGLSALVALATFSPARSACDDITQYLDIPEILDGDTTITLEVTTIDback to top mRNA from alignment at D-dudresnayi_contig991:17190..29968- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig991.28729.1 ID=mRNA_D-dudresnayi_contig991.28729.1|Name=mRNA_D-dudresnayi_contig991.28729.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=12779bp|location=Sequence derived from alignment at D-dudresnayi_contig991:17190..29968- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig991:17190..29968- >mRNA_D-dudresnayi_contig991.28729.1 ID=mRNA_D-dudresnayi_contig991.28729.1|Name=mRNA_D-dudresnayi_contig991.28729.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2424bp|location=Sequence derived from alignment at D-dudresnayi_contig991:17190..29968- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |