mRNA_D-dudresnayi_contig9895.28708.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9895.28708.1 vs. uniprot
Match: A0A6H5K2V6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2V6_9PHAE) HSP 1 Score: 229 bits (583), Expect = 1.320e-65 Identity = 110/153 (71.90%), Postives = 128/153 (83.66%), Query Frame = 2 Query: 269 LLPSPTTPSARFARDVMAGAKAQAWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIETSSSPFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHLSTPEKPDVDPAVKAVVDISKG 727 +LPSP+TPSARFARD AG KA+ WVEEVIG RLP+GDFA FK+GQGLC L+NTFRP SI KIE S+SPF QMANIS+F++ACR LGV E LFETLDL+NE RL QVVRCLFSLSE+VRT MP + GP+L P+KP+VDPAV +VDI+KG Sbjct: 18 MLPSPSTPSARFARDASAGLKARHWVEEVIGRRLPEGDFAAGFKDGQGLCELVNTFRPASIPKIERSASPFHQMANISSFLKACRMLGVSEHVLFETLDLFNENRLPQVVRCLFSLSELVRTTMPSYHGPYLGAPDKPEVDPAVLHLVDIAKG 170
BLAST of mRNA_D-dudresnayi_contig9895.28708.1 vs. uniprot
Match: A0A836CGB8_9STRA (Calponin homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB8_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.260e-32 Identity = 59/111 (53.15%), Postives = 82/111 (73.87%), Query Frame = 2 Query: 332 AQAWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIETSSSPFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHL 664 AQ W+E V + +G FA A K+G LC+L+N RPG++ KI TSS PFKQM NISA+++ CRALGV E +LFET+DLY EK + V++CLF+L +++++P+F GPHL Sbjct: 31 AQEWIEAVTRVKF-EGTFAAALKDGSVLCKLLNAIRPGTVKKINTSSMPFKQMENISAYLKGCRALGVAEHSLFETVDLYEEKDISLVIKCLFALGSTIQSSVPEFHGPHL 140
BLAST of mRNA_D-dudresnayi_contig9895.28708.1 vs. uniprot
Match: A0A835ZHQ8_9STRA (Calponin homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ8_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.050e-29 Identity = 58/111 (52.25%), Postives = 80/111 (72.07%), Query Frame = 2 Query: 332 AQAWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIETSSSPFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHL 664 AQ W+E V G + +G FA + K+G LC+LIN +PG+I +I +S PFKQM NIS F++ACR LGV E +LFET+DL+ EK + V+RCLF+L V+++ P+F GPHL Sbjct: 30 AQEWMEAVTGVKF-EGSFASSLKDGTLLCQLINAIKPGTIKRINSSKMPFKQMENISNFLKACRTLGVAEYSLFETVDLFEEKDVGLVIRCLFALGSAVQSSTPEFAGPHL 139
BLAST of mRNA_D-dudresnayi_contig9895.28708.1 vs. uniprot
Match: A0A6H5L3X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X7_9PHAE) HSP 1 Score: 125 bits (315), Expect = 3.230e-29 Identity = 69/157 (43.95%), Postives = 94/157 (59.87%), Query Frame = 2 Query: 293 SARFARDVMAGAKAQAWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIET--SSSPFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHLSTPEKPDVDPAVKAVVDISKGRHPHSHGHSA 757 SA + D+ A + QAWVE+V GE +GDFA+ ++G LC+L+NT +P S+ +I FKQM NIS FI+ CRA+GV E +LFET+DLY K + VV+CL +L V+ N P+F GPHL P V A V + R P + H+A Sbjct: 10 SAGYGGDLQA--EVQAWVEQVTGEPF-EGDFADGLRDGVRLCKLLNTIKPSSVRRINPFKEGQKFKQMENISNFIRGCRAIGVPEYSLFETVDLYEGKDVGLVVKCLHALGGTVQKNCPEFGGPHLGLKPVSRAPPRVAAAVPTAAARAPQAFDHAA 163
BLAST of mRNA_D-dudresnayi_contig9895.28708.1 vs. uniprot
Match: A0A0W8CZ75_PHYNI (Luc7 protein 3 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CZ75_PHYNI) HSP 1 Score: 122 bits (305), Expect = 4.840e-28 Identity = 63/135 (46.67%), Postives = 89/135 (65.93%), Query Frame = 2 Query: 272 LPSPTTPSARFARDVMAGAKAQAWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIETSSSPFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHLSTPE 676 L S TT S A + +AQ W+E V+GE+ F ++ K+G LC L+N +PG I +I+TSS PFKQM N+SAF++ACR++GV E LFET+DLYN+K L QVV+C+ +L ++ MP++ GP L E Sbjct: 280 LNSVTTSSGPTAEE-----EAQEWIEAVLGEKF-LASFGDSLKDGVMLCSLMNKIKPGLIPRIQTSSMPFKQMENVSAFVRACRSIGVAEFDLFETVDLYNQKNLGQVVQCIHALGRTIQKTMPEYNGPLLGVKE 408
BLAST of mRNA_D-dudresnayi_contig9895.28708.1 vs. uniprot
Match: D7FJ16_ECTSI (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ16_ECTSI) HSP 1 Score: 119 bits (297), Expect = 5.600e-28 Identity = 57/118 (48.31%), Postives = 82/118 (69.49%), Query Frame = 2 Query: 311 DVMAGAKAQAWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIETSSSPFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHL 664 D A +A+AW+E V GER+ G F +A ++G +C+L+NT +PG++ KI S PFKQM NIS F+++CRA+GV E +LFET+DLY K + VVRC+F+L V+ P++ GP L Sbjct: 26 DHSAEDQARAWIEAVTGERVV-GPFGDALRDGVVICKLVNTIKPGAVRKINESRMPFKQMENISNFLKSCRAMGVAEHSLFETVDLYEGKDIGLVVRCIFALGSAVQGTCPEYTGPTL 142
BLAST of mRNA_D-dudresnayi_contig9895.28708.1 vs. uniprot
Match: W2NFZ0_PHYPR (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2NFZ0_PHYPR) HSP 1 Score: 122 bits (305), Expect = 6.780e-28 Identity = 63/135 (46.67%), Postives = 89/135 (65.93%), Query Frame = 2 Query: 272 LPSPTTPSARFARDVMAGAKAQAWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIETSSSPFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHLSTPE 676 L S TT S A + +AQ W+E V+GE+ F ++ K+G LC L+N +PG I +I+TSS PFKQM N+SAF++ACR++GV E LFET+DLYN+K L QVV+C+ +L ++ MP++ GP L E Sbjct: 280 LNSVTTSSGPTAEE-----EAQEWIEAVLGEKF-LASFGDSLKDGVMLCSLMNKIKPGLIPRIQTSSMPFKQMENVSAFVRACRSIGVAEFDLFETVDLYNQKNLGQVVQCIHALGRTIQKTMPEYNGPLLGVKE 408
BLAST of mRNA_D-dudresnayi_contig9895.28708.1 vs. uniprot
Match: A0A7S1QBB5_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1QBB5_ALECA) HSP 1 Score: 114 bits (285), Expect = 1.150e-27 Identity = 56/129 (43.41%), Postives = 81/129 (62.79%), Query Frame = 2 Query: 338 AWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIETSSSPFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHLSTPEKPDVDPAVKAVVDISK 724 AWVE V GE F + ++GQ LCRL N +PG +I TS+ PFKQM N++AFIQACR LGV E+ +F T+DL+ +K L+ V C+++L ++RT+ P F GP+L + V V D+++ Sbjct: 10 AWVETVGGEERGGLSFGDWLRDGQVLCRLANKIQPGICPRINTSTMPFKQMENVTAFIQACRKLGVLEKDVFSTVDLFEQKNLKSVCICIYNLGSMIRTSAPSFKGPYLGVAQ-------VGGVTDVAR 131
BLAST of mRNA_D-dudresnayi_contig9895.28708.1 vs. uniprot
Match: A0A6A3WDR1_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WDR1_9STRA) HSP 1 Score: 119 bits (299), Expect = 4.620e-27 Identity = 55/116 (47.41%), Postives = 82/116 (70.69%), Query Frame = 2 Query: 329 KAQAWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIETSSSPFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHLSTPE 676 +AQ W+E V+GE+ F ++ K+G LC L+N +PG I KI++SS PFKQM N+S+F++ACRA+GV E LFET+DL+N+K + QVV+C+ +L ++ MP++ GP L E Sbjct: 297 EAQEWIEAVLGEKF-LASFGDSLKDGVILCTLMNKIQPGLIPKIQSSSMPFKQMENVSSFVRACRAIGVAEFDLFETVDLFNQKNIGQVVQCIHALGRTIQKTMPEYDGPRLGVKE 411
BLAST of mRNA_D-dudresnayi_contig9895.28708.1 vs. uniprot
Match: A0A3M6VLG4_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VLG4_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.400e-26 Identity = 56/119 (47.06%), Postives = 82/119 (68.91%), Query Frame = 2 Query: 320 AGAKAQAWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIETSSSPFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHLSTPE 676 A +AQ W+E V+GE+ FA++ K+G LC ++N +PG I I+TS+ PFKQM N+S F++ACR +GV E LFET+DLYN+K L QVV+C+ +L ++ MP++ GP+L E Sbjct: 291 AEEEAQEWIEAVLGEKF-LASFADSLKDGVMLCTVMNKIKPGFIPHIQTSTMPFKQMENVSNFVRACRNIGVAEFDLFETVDLYNQKNLGQVVQCIHALGRTIQKTMPEYDGPNLGVKE 408 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9895.28708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9895.28708.1 >prot_D-dudresnayi_contig9895.28708.1 ID=prot_D-dudresnayi_contig9895.28708.1|Name=mRNA_D-dudresnayi_contig9895.28708.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=203bp MVSSVVVARAKSVAPKPLFDRSMLLPSPTTPSARFARDVMAGAKAQAWVEback to top mRNA from alignment at D-dudresnayi_contig9895:3395..4806+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9895.28708.1 ID=mRNA_D-dudresnayi_contig9895.28708.1|Name=mRNA_D-dudresnayi_contig9895.28708.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1412bp|location=Sequence derived from alignment at D-dudresnayi_contig9895:3395..4806+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9895:3395..4806+ >mRNA_D-dudresnayi_contig9895.28708.1 ID=mRNA_D-dudresnayi_contig9895.28708.1|Name=mRNA_D-dudresnayi_contig9895.28708.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at D-dudresnayi_contig9895:3395..4806+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |