mRNA_D-dudresnayi_contig9873.28691.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9873.28691.1
Unique NamemRNA_D-dudresnayi_contig9873.28691.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9873.28691.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9873contigD-dudresnayi_contig9873:318..3340 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-21_005030.1
Exons2
Model size2242
Cds size1254
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9873.28691.1prot_D-dudresnayi_contig9873.28691.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9873 534..2568 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930947.95897-UTR-D-dudresnayi_contig9873:317..5331622930947.95897-UTR-D-dudresnayi_contig9873:317..533Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9873 318..533 +
1690557976.1850913-UTR-D-dudresnayi_contig9873:317..5331690557976.1850913-UTR-D-dudresnayi_contig9873:317..533Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9873 318..533 +
1622930948.092442-UTR-D-dudresnayi_contig9873:2568..33401622930948.092442-UTR-D-dudresnayi_contig9873:2568..3340Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9873 2569..3340 +
1690557976.2158723-UTR-D-dudresnayi_contig9873:2568..33401690557976.2158723-UTR-D-dudresnayi_contig9873:2568..3340Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9873 2569..3340 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930947.9817116-CDS-D-dudresnayi_contig9873:533..7081622930947.9817116-CDS-D-dudresnayi_contig9873:533..708Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9873 534..708 +
1690557976.1940572-CDS-D-dudresnayi_contig9873:533..7081690557976.1940572-CDS-D-dudresnayi_contig9873:533..708Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9873 534..708 +
1622930948.0734327-CDS-D-dudresnayi_contig9873:1489..25681622930948.0734327-CDS-D-dudresnayi_contig9873:1489..2568Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9873 1490..2568 +
1690557976.2035346-CDS-D-dudresnayi_contig9873:1489..25681690557976.2035346-CDS-D-dudresnayi_contig9873:1489..2568Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9873 1490..2568 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9873.28691.1

>prot_D-dudresnayi_contig9873.28691.1 ID=prot_D-dudresnayi_contig9873.28691.1|Name=mRNA_D-dudresnayi_contig9873.28691.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=418bp
MSPKMEAGGVSAESGMGWIARDIARPSSLLRVVVADRAIQPRVDDDCYGP
SPVYRREAVVTAQVTRKAPRTPPAAMREDKLPFPRNPPALARRRSALKPA
TPRADLIPPTPSKQSSGSISMVAHSSSVVAPSRDGNAGMLFSRADHRISR
TGPLSITSSDGHTRLRAAHGLRSSFSGGNQNGSSSVGTLPRQSPTFAGIR
AEEAHRRAWCFAGPSCSSPPRLAALGSMPRTGRRATTGGRLETPACQSTA
TPACGDSVTRRSSAGARVEAPPVCFTEGKAPAAETGRSEKARGAALDFKR
MLPLKKMASDEGGDSTRAGSGPAGEVAEILKRGDGCADADVSSRVKAAQK
IKTGPCKSVGGGAHTGMSVAEFADKVAALAADVASVLGISGKRSNTTSAN
CKTQEGRMRGRAPGVGL*
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mRNA from alignment at D-dudresnayi_contig9873:318..3340+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9873.28691.1 ID=mRNA_D-dudresnayi_contig9873.28691.1|Name=mRNA_D-dudresnayi_contig9873.28691.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=3023bp|location=Sequence derived from alignment at D-dudresnayi_contig9873:318..3340+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGATGTGATCATATGATAGGTTGGTGTGCCCTTTCGTTCTGAATGAACA
ATGGTTGAAACCGTTCACCATTTTCCATTTTCCGGTAGGGCCCACAGCAC
CATCTCCAGGATTTTGACATGCCCTGCCCCACCCAGGATCTGGACACGCA
CGCGCCAAGTACAGCCTTTTCCCGCTCGAGCAATCTGCAAACATTACCGT
TGCACCCACACACACCATGTCCCCCAAGATGGAGGCCGGAGGCGTGAGTG
CTGAGAGCGGCATGGGATGGATTGCGAGAGACATCGCGAGACCATCATCA
CTACTTAGAGTGGTTGTGGCTGACCGTGCAATCCAGCCTCGCGTTGACGA
CGACTGCTACGGTCCCAGCCCCGTTTACAGGAGAGAGGCAGGTACTCAAC
AGACGGATGAGTTCCCGTTGTGCAAAAATACAGGGGGGTCGACCCTATAC
CACCAGTGATGGACGATACTCTTGTGGCTGAAGCAATCCACTGTTAGATG
TGTGTGAATACAGGTTGTTGTCGTGCAATAGTTCCTCCTTTCCCCAAATC
AGCAACAACAGCAGGTGAATTTTTTGCCTGTTGCACAGCGGGCTGCAACA
CCGAAAGGTCCACTTTGGTGCAGCTCTCGATGATCGAAGTTGCTTCCACC
CCTGTTGAGCGAGCCTTGTTCCCACATATTCGTCTGAGAGCCCCAACATG
CTTGCAATACATCGTCTGCACCCTGTATATGTCAGGGTGCGGTGTGATGG
TGTGCACGTCTTTGCTGTCTTGCCTGCTTTGTAATTTGAATTTCTGTGGG
TGCTGCGCACAATCTGTCTGTCTGGTGTTGTGTGTTGTGTGTTGCTGCAT
TTGCAAACGGTCACCTACACGCGACTGTTATTACTCGAAGTGTAAGGCTT
GCCCCAATTGAGCTCCCGAGTGGATGAACAGGACGTGGGTATTGTGGCTG
GTTGTGACTGTCATATCATATCAGCAGAAACGAACTCAGAGCCAACAAAG
AGTATCGTGTCTGGCGTTCTATCATATAAGTGCTTGCTGTCACGCTTCAT
CATTCATGTATGATAATCTTCGTTCGTCGTATATTCGAGCAACGCAAGGT
AATGATTCTGTCCATCGTCTATCCACCTTTTTAACCCTCGTCGTTGTTCA
CGCGACCGTTGCACAATTACAGTTGTGACAGCTCAAGTAACCAGAAAAGC
TCCTAGGACACCTCCTGCAGCCATGCGAGAGGACAAGCTACCGTTCCCGC
GAAATCCACCAGCACTCGCTAGGAGGCGATCTGCTCTCAAACCTGCCACG
CCACGGGCGGATCTTATCCCACCGACGCCGTCGAAGCAGTCCTCTGGTTC
CATTTCCATGGTCGCACACTCGTCTTCTGTCGTGGCACCGTCAAGGGACG
GGAATGCCGGCATGCTGTTCAGCCGTGCCGACCATAGAATATCAAGAACC
GGCCCGTTGTCCATTACTTCAAGCGATGGTCACACCCGCTTGAGAGCAGC
TCACGGTCTCCGTAGCTCGTTTTCTGGTGGAAACCAGAACGGCTCCTCAT
CCGTGGGCACCTTGCCGAGGCAGAGCCCAACGTTCGCAGGTATCCGGGCA
GAGGAGGCGCATAGAAGGGCCTGGTGTTTCGCGGGGCCCTCGTGTTCTTC
GCCGCCCCGGTTAGCCGCGCTGGGGAGTATGCCGCGTACTGGTAGGCGCG
CAACCACTGGCGGTAGGCTCGAGACTCCCGCGTGCCAGTCTACTGCTACA
CCTGCGTGCGGTGACAGCGTTACCCGGCGAAGCTCAGCTGGTGCGAGAGT
TGAAGCCCCTCCTGTCTGCTTCACCGAGGGTAAAGCGCCTGCCGCCGAGA
CTGGAAGGAGCGAGAAGGCCCGAGGAGCAGCCCTGGATTTCAAAAGGATG
CTGCCGTTGAAAAAGATGGCCTCCGACGAGGGTGGCGATTCGACACGCGC
CGGGTCTGGGCCGGCTGGGGAGGTTGCGGAAATCCTGAAACGGGGCGATG
GCTGCGCTGACGCCGATGTAAGTAGCAGAGTTAAAGCAGCTCAAAAAATC
AAAACTGGGCCTTGTAAGTCTGTTGGAGGTGGAGCTCATACGGGTATGTC
TGTCGCGGAGTTTGCTGATAAAGTTGCTGCATTGGCAGCTGATGTTGCTA
GCGTTTTGGGCATCAGCGGCAAACGCTCGAACACGACGTCTGCCAATTGC
AAGACTCAAGAGGGTAGAATGAGGGGAAGAGCTCCTGGTGTTGGTCTGTG
ATAGTTGGAGGTTATGTATGGACGATTCGAGGATTTTTGTAGGGTACTAC
TATAATAGGAGTACTGTACTGTTGTTGTATTGACTGGAAGAGGAGGAGAG
GTGCCGTTCACGCATCTATCGGTCATGACGATCTGGGAACATACACAAAT
GCTTGTCGCCGTTGTCAGGTTTCGCTGGACGATCGTTTTGCATACGACGT
AATAATTTAACTTGTCGATTTGGAGGTATTGGTATCATATGATAGGTGTC
GTTTCACCATAACAGCAAGGTGTGTTGAAATCTCGTAGTTGTTACGATTT
GTGAAAAACAAGACAACGTGGTTGCACGTGCCAAGACTAAAGGTTGCTCC
TACGTATTAGATGATACGACGTACTGAATACGCTTTTCTTGGTACTGACG
CGCTGACGTTGAATCACAACTACCCAAGACTGAAAACGACGGCATTGTTC
GATGATAGTTGCGCTTTGCTTTGCCTCGAAGTAATATGTGATGCTTACAC
TTGCAATGATCTCTTCTTGTTTTGTTATTTTTCTGTATATTGATTTAGTC
TATATATAGCACAGAACGAACTACTTTGTCAGGAGACCAGCCAGGTTACA
TGATAGATTTTTCACGAGGCTTTGGGGAAGTATACTATGATGACTGCATA
GTCTAGAGCTCTAGAGGAACAACTGGTATAGTCGCTGACGCTGCAGGTTA
TAGCAGTATATTGTCGGGTACGTCGTACATTGTACCAGTACTATTTGTAT
ATCAGGTACTTGGTGGGGAGGGG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9873:318..3340+

>mRNA_D-dudresnayi_contig9873.28691.1 ID=mRNA_D-dudresnayi_contig9873.28691.1|Name=mRNA_D-dudresnayi_contig9873.28691.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2508bp|location=Sequence derived from alignment at D-dudresnayi_contig9873:318..3340+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTCCCCCAAGATGGAGGCCGGAGGCGTGAGTGCTGAGAGCGGCATGGG
ATGGATTGCGAGAGACATCGCGAGACCATCATCACTACTTAGAGTGGTTG
TGGCTGACCGTGCAATCCAGCCTCGCGTTGACGACGACTGCTACGGTCCC
AGCCCCGTTTACAGGAGAGAGGCAGATGTCCCCCAAGATGGAGGCCGGAG
GCGTGAGTGCTGAGAGCGGCATGGGATGGATTGCGAGAGACATCGCGAGA
CCATCATCACTACTTAGAGTGGTTGTGGCTGACCGTGCAATCCAGCCTCG
CGTTGACGACGACTGCTACGGTCCCAGCCCCGTTTACAGGAGAGAGGCAG
TTGTGACAGCTCAAGTAACCAGAAAAGCTCCTAGGACACCTCCTGCAGCC
ATGCGAGAGGACAAGCTACCGTTCCCGCGAAATCCACCAGCACTCGCTAG
GAGGCGATCTGCTCTCAAACCTGCCACGCCACGGGCGGATCTTATCCCAC
CGACGCCGTCGAAGCAGTCCTCTGGTTCCATTTCCATGGTCGCACACTCG
TCTTCTGTCGTGGCACCGTCAAGGGACGGGAATGCCGGCATGCTGTTCAG
CCGTGCCGACCATAGAATATCAAGAACCGGCCCGTTGTCCATTACTTCAA
GCGATGGTCACACCCGCTTGAGAGCAGCTCACGGTCTCCGTAGCTCGTTT
TCTGGTGGAAACCAGAACGGCTCCTCATCCGTGGGCACCTTGCCGAGGCA
GAGCCCAACGTTCGCAGGTATCCGGGCAGAGGAGGCGCATAGAAGGGCCT
GGTGTTTCGCGGGGCCCTCGTGTTCTTCGCCGCCCCGGTTAGCCGCGCTG
GGGAGTATGCCGCGTACTGGTAGGCGCGCAACCACTGGCGGTAGGCTCGA
GACTCCCGCGTGCCAGTCTACTGCTACACCTGCGTGCGGTGACAGCGTTA
CCCGGCGAAGCTCAGCTGGTGCGAGAGTTGAAGCCCCTCCTGTCTGCTTC
ACCGAGGGTAAAGCGCCTGCCGCCGAGACTGGAAGGAGCGAGAAGGCCCG
AGGAGCAGCCCTGGATTTCAAAAGGATGCTGCCGTTGAAAAAGATGGCCT
CCGACGAGGGTGGCGATTCGACACGCGCCGGGTCTGGGCCGGCTGGGGAG
GTTGCGGAAATCCTGAAACGGGGCGATGGCTGCGCTGACGCCGATGTAAG
TAGCAGAGTTAAAGCAGCTCAAAAAATCAAAACTGGGCCTTGTAAGTCTG
TTGGAGGTGGAGCTCATACGGGTATGTCTGTCGCGGAGTTTGCTGATAAA
GTTGCTGCATTGGCAGCTGATGTTGCTAGCGTTTTGGGCATCAGCGGCAA
ACGCTCGAACACGACGTCTGCCAATTGCAAGACTCAAGAGGGTAGAATGA
GGGGAAGAGCTCCTGGTGTTGGTCTGTGATTGTGACAGCTCAAGTAACCA
GAAAAGCTCCTAGGACACCTCCTGCAGCCATGCGAGAGGACAAGCTACCG
TTCCCGCGAAATCCACCAGCACTCGCTAGGAGGCGATCTGCTCTCAAACC
TGCCACGCCACGGGCGGATCTTATCCCACCGACGCCGTCGAAGCAGTCCT
CTGGTTCCATTTCCATGGTCGCACACTCGTCTTCTGTCGTGGCACCGTCA
AGGGACGGGAATGCCGGCATGCTGTTCAGCCGTGCCGACCATAGAATATC
AAGAACCGGCCCGTTGTCCATTACTTCAAGCGATGGTCACACCCGCTTGA
GAGCAGCTCACGGTCTCCGTAGCTCGTTTTCTGGTGGAAACCAGAACGGC
TCCTCATCCGTGGGCACCTTGCCGAGGCAGAGCCCAACGTTCGCAGGTAT
CCGGGCAGAGGAGGCGCATAGAAGGGCCTGGTGTTTCGCGGGGCCCTCGT
GTTCTTCGCCGCCCCGGTTAGCCGCGCTGGGGAGTATGCCGCGTACTGGT
AGGCGCGCAACCACTGGCGGTAGGCTCGAGACTCCCGCGTGCCAGTCTAC
TGCTACACCTGCGTGCGGTGACAGCGTTACCCGGCGAAGCTCAGCTGGTG
CGAGAGTTGAAGCCCCTCCTGTCTGCTTCACCGAGGGTAAAGCGCCTGCC
GCCGAGACTGGAAGGAGCGAGAAGGCCCGAGGAGCAGCCCTGGATTTCAA
AAGGATGCTGCCGTTGAAAAAGATGGCCTCCGACGAGGGTGGCGATTCGA
CACGCGCCGGGTCTGGGCCGGCTGGGGAGGTTGCGGAAATCCTGAAACGG
GGCGATGGCTGCGCTGACGCCGATGTAAGTAGCAGAGTTAAAGCAGCTCA
AAAAATCAAAACTGGGCCTTGTAAGTCTGTTGGAGGTGGAGCTCATACGG
GTATGTCTGTCGCGGAGTTTGCTGATAAAGTTGCTGCATTGGCAGCTGAT
GTTGCTAGCGTTTTGGGCATCAGCGGCAAACGCTCGAACACGACGTCTGC
CAATTGCAAGACTCAAGAGGGTAGAATGAGGGGAAGAGCTCCTGGTGTTG
GTCTGTGA
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