mRNA_D-dudresnayi_contig987.28683.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
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Overview
Homology
BLAST of mRNA_D-dudresnayi_contig987.28683.1 vs. uniprot
Match: A0A6H5JIZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIZ9_9PHAE) HSP 1 Score: 812 bits (2097), Expect = 9.660e-263 Identity = 573/1405 (40.78%), Postives = 757/1405 (53.88%), Query Frame = 1
Query: 1 LSERELHKKMRRLTFAEQEGVARAMEVFAAQVDGKAMGDRDLFNLVDRDRNDILTRSEVRLALADRRLVLADQELNYLMTFFDYKGLGHVTFGDLHDCLRTFREFQRPPARNEQPLTTTARSTRPSWGPRARTQSPPDIVTATRLGKALLTPLLLFTGPPPVDGGVLKKRHR---SPKKCLESNGRMGYLDITDPEIDSLADYLMGENSENERSS----CNTEVHATTTDKTKV-LLRPLPHIVTALVSIAAQAPKNNLLRQEQLFDGDIRGPGSAAVASSARRICKALGELQRLWRQNERLLRGRGRRYQLTQQEPDGLSNDELDAAVLFFDVDGGGHMSLDDVLAVFRSVRTDRFVRRRPPTAAIPPLAAIGSQLNKHGITPAEFVRKAASSTVASSSA--------SSDTRKKRGLQHSSANQGRPATKAQFGALLCQMIHLTAKQHDLVVDSVQENGLVWGAHLAGAVRRAKREVAHRRLERKEQERRKGAAYWRGRGGGDTEAESDGTEGTVTGIGGGT-----------SVGTASSPSKHQLASTQLRYRQSGPATGHEFDQFDASLLLDAFTHGGGGLRSLGPENAVAVWRGIKRCERGARANEEGRSASRDLRRLLRSRGVNPLRWFTDLSDDAVTANAANAAATAMGTQTSADGRVAMSTLFAAIRALAAMPVTVAPPRSAIVDSGRKAGTTTSDTEGSIVGVVGGLEGTGSESSLELPTLEERGDVHKWDKVRISALAGHLDPCGEGSVSRAGFQEAIRDSRGAGVFYPDASQLAAARRFEATLRKIGCLEVCRLLEVRTQGGRGGGDLVEYVKQMGDRARLNAVHGRDIGARKDPAARALVAREEVSHRYSCREPQRNSEESSRLREKLARPENARALNAIRRIDELMSKQGKRLVDEFHHADTNDSGGVDHAELKRAIENLVRPCPLVRFERKRRQERLAEAMAAANQAESWREDFVQRMEALHRSKASHFLEAVSAELRHRRLQIRDVFREVDVGKSGGLGVDDLLNNTQRALGLKLDREEAAALVSMLDVDGDQAIQCNELEI----------------------------------------------ALRQYRRYRWERARWTYRKPFHEEYPSLYSLFHRRSKNLSPPLHRGGGHGDDSSSSNSRNDAESP--PKVSREDVVLALVRLRGGSSGKLRGVRDNSA--------HARRERMLAEAARKIGRCCMAAGVRTLSAFEETLAMFDFGPADEASGHAGRMRTVDVWHWLRLLSAPTE----ASCGGTGVVTSGSAVGSSRPRVKE--LLKQXXXXXXXXHRGRNKGG----LSAVPSGRLLNSEETSLVLDAIEYQPPLGQDRDEEXXXXAAAAGRFYVSVPDLWELLDKHVPGLWDREEDENL 3936
LS+REL+ +MR L+ EQ + +E FAAQVDGK+M RDLFNL+D +R+++LTRSE++ AL +R+LVL D++L +L+ FFD G G+VT GDLHDCLRTFR + + Q STR PR + + PPD TRL ALL PL LF+ PV+G +R+ S K+ LE + +LDITDPEI SLAD+LM + R N H TD + LRPLP ++ AL S A++AP + Q+ G IRGPG+AAV SA R+ L LQR+WRQ +R + + L Q+ D ++++L AAV FDVD GH+ L+DV+ VFR R D+FVR R P AAIP L AIG L I+ +FV+ AA+ST+ S ++KR + + + AT AQ GALL + L A+Q +LV++ ++E+GLV GA+LAG VRRA+ E+AHR+LER EQ++ D S T V+ + G G A + + LA Q ++++ G F+Q DASL+L+ F GGGLR+L ++A +WRG+KR RG A+E GRSA+R L +LL SR + PL+WF L D ++A + + M + RVAMS++ ++AL T P + V T SD EG+ + G L S T + +W K ++S L HLDPCGEGS+++ FQE + RG YPDA+ LAAARR E LR GC +VC + GRGGGDLV I+++DELMS QG+RLV EFH ADTN SGGVD ELK+ ++NLV+PC L+RFERKRR+ER A + AE W++ F+++MEAL +SKAS+FL+ +S LR+RR QIRDVFR+VD GKSG LGVDDLL NT ALGLKLDR EAAALVSMLD +GD++IQC ELE+ ALR YRRY WER RW+ RKPFHEE+PSL LF R ++ GD + + + P KV+R D+V ALVRLRGGSSG G + +R R+L +A RK+ CC AGVRT A TLA FDFGP DEA AGRMR VD+WHWLRLLSAPT+ + GG+ + G R K+ L + G +GG + + SGRLL++EET+L+LDA+E + + + RD A VSVP W+LL +HVPGLWDRE E L
Sbjct: 5 LSQRELNMQMRLLSPGEQGIIDHVLETFAAQVDGKSMRTRDLFNLMDSNRDNVLTRSELKEALVNRQLVLRDEQLTHLLAFFDVHGHGYVTLGDLHDCLRTFRAVRHRTKIHGQ-------STRL---PRPQPRPPPDSTAVTRLQSALLAPLTLFSAQAPVEGQRKHQRYTKNASEKRILEQEAGISFLDITDPEISSLADFLMDAEKKGGRPHGGLPSNPVDHIPPTDAHQPNALRPLPLVMAALESAASRAP--GCINQDGQQTGGIRGPGAAAVQCSAARVLWILRGLQRVWRQEDRHRKAKT----LIQESADEFTDEKLSAAVGLFDVDSQGHIDLEDVMTVFRKARVDKFVRGRLPAAAIPSLVAIGRHLESRKISAHDFVQDAAASTIVDPSEPCGHKRDLKPTPKRKRAAKR---DNTQTATTAQLGALLFSELQLDAEQRNLVLECIEEDGLVSGANLAGGVRRARGELAHRKLERLEQQQSMVD---------DGRCRSSETGSQVSEVTGSACSIISPPRFRRQAGVAPTAEEGMLAPLQHKHQRDG------FNQSDASLILELFVKEGGGLRNLTGKSAARLWRGLKRRGRGVHAHENGRSAARRLLQLLGSRDIKPLQWFATL-DPTAESSAPSDEGSFM------ERRVAMSSIVQGVQALDGTTRTGPPGEANTVH-------TASDDEGATDSLEGTLSSNDGSYSSTGQTAGKNDKAQRWTKAQLSDLVRHLDPCGEGSITQEVFQEGLCVCRGDRGAYPDAAHLAAARRLEDALRDDGCRDVCGMFHSLAGEGRGGGDLV---------------------------------------------------------------------GTIQKLDELMSLQGRRLVVEFHQADTNRSGGVDPTELKKVMKNLVQPCSLLRFERKRRRERQQAAAVTSQNAERWKKGFMEKMEALDKSKASNFLDIISTALRNRRWQIRDVFRDVDKGKSGALGVDDLLENTHLALGLKLDRGEAAALVSMLDTNGDKSIQCEELEVRMQRTRVLSTVESSGKVYLADHPLDRFPSCSTLSSPPLRPTIQQQLALRLYRRYGWERHRWSRRKPFHEEFPSLSCLFRRTTR----------AEGDGAGLQQQQRNPALPRDTKVNRGDIVTALVRLRGGSSGDAVGGNRGRGQLLPAYGPNIQRRRVLLKAVRKVANCCQTAGVRTAPALLATLAHFDFGPVDEARRKAGRMRAVDLWHWLRLLSAPTDDPGGSFMGGSFNDNANRTKGVHGQRRKKDVLCGRNKSIYGFGDCGGGRGGAHKTVDEMVSGRLLDAEETALLLDALELRTRVQEARDAPAT--GATEDGPLVSVPAFWDLLVEHVPGLWDRELQERL 1280
BLAST of mRNA_D-dudresnayi_contig987.28683.1 vs. uniprot
Match: D8LRB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB6_ECTSI) HSP 1 Score: 736 bits (1901), Expect = 5.400e-236 Identity = 551/1377 (40.01%), Postives = 727/1377 (52.80%), Query Frame = 1
Query: 28 MRRLTFAEQEGVARAMEVFAAQVDGKAMGDRDLFNLVDRDRNDILTRSEVRLALADRRLVLADQELNYLMTFFDYKGLGHVTFGDLHDCLRTFREFQRPPARNEQPLTTTARSTRPSWGPRARTQSPPDIVTATRLGKALLTPLLLFTGPPPVDGGVLKKRHR---SPKKCLESNGRMGYLDITDPEIDSLADYLMGENSENERSS----CNTEVHATTTD-KTKVLLRPLPHIVTALVSIAAQAPKNNLLRQEQLFDGDIRGPGSAAVASSARRICKALGELQRLWRQNERLLRGRGRRYQLTQQEPDGLSNDELDAAVLFFDVDGGGHMSLDDVLAVFRSVRTDRFVRRRPPTAAIPPLAAIGSQLNKHGITPAEFVRKAASSTVASSSASSDTRKKRGLQHSSANQGRPATKAQFGALLCQMIHLTAKQHDLVVDSVQENGLVWGAHLAGAVRRAKREVAHRRLERKEQERR--KGAAYWRGRGGGDTEAESDGTEGTVTGIGGGTSVGTASSPSKHQLASTQLRYRQSGPATGHEFDQFDASLLLDAFTHGGGGLRSLGPENAVAVWRGIKRCERGARANEEGRSASRDLRRLLRSRGVNPLRWFTDLSDDAVTANAANAAATAMGTQTSADGRVAMSTLFAAIRALAAMPVTVAPPRSAIVDSGRKAGTTTSDTEGSIVGVVGGLEGTGSESSLELPTLEERGDVHKWDKVRISALAGHLDPCGEGSVSRAGFQEAIRDSRGAGVFYPDASQLAAARRFEATLRKIGCLEVCRLLEVRTQGGRGGGDLVEYVKQMGDRARLNAVHGRDIGARKDPAARALVAREEVSHRYSCREPQRNSEESSRLREKLARPENARALNAIRRIDELMSKQGKRLVDEFHHADTNDSGGVDHAELKRAIENLVRPCPLVRFERKRRQERLAEAMAAANQAESWREDFVQRMEALHRSKASHFLEAVSAELRHRRLQIRDVFREVDVGKSGGLGVDDLLNNTQRALGLKLDREEAAALVSMLDVDGDQAIQCNELEIALRQYRRYRWERARWTYRKPFHEEYPSLYSLFHRRSKNLSPPLHRGGGHGDDSSSSNSRNDA-ESPPKVSREDVVLALVRLRGGSSGKLRG--------VRDNSAHARRERMLAEAARKIGRCCMAAGVRTLSAFEETLAMFDFGPADEASGHAGRMRTVDVWHWLRLLSAPTEASCGGTGVVTSGSAVGSSRPRVKELLKQXXXXXXXXHRGRNK-------------GG----LSAVPSGRLLNSEETSLVLDAIEYQPPLGQDRDEEXXXXAAAAGRFYVSVPDLWELLDKHVPGLWDRE-----EDENLRRIAAENKKQQDALRKRQLAAALMIQGAVRQRQ 4035
MR L+ EQ + +E FAAQVDGK+M RD FNL+D +R+++LTRSE++ AL +R+LVL D +L +LM F D G G+VT GDLHD LR FR AR+ + +STR PR + + P D TRL ALL PL LF+ PV+G +R++ S K+ LE + +LDITDPEI SLAD+LM R N H TTD + LRPLP I+ AL S A++AP + ++ G IRGPG+AAV SA R+ L LQR+WRQ +R R + L Q+ D ++++L AV FDVDG GH+ L DV+ VFR+ R D+FVR R P AAIP L AIG L IT +FV+ AA+ST+ SS + RK+ + +Q + AT AQ GALL + L AKQ +LV++ ++E+GLV GA++AGAVRRA+ E+AHR+LER EQ++ G W G S T ++ G A + + LA Q ++++ G F+Q DASL+L F GGGLR+L ++A ++WRG+KR RG A E+GRSA+R LR+LL SR + P RWF L A ++ ++ ++S + RV MS++ ++AL GG TG E T+ D D+ +L G L +GS S +T + G +N +A ++++DELMS QG+RLV EFH ADTN SGGVD ELK+ ++NL++PC L+RFERKRR+ER A A + AE W+ DF+++MEAL +SKAS+FL+ +S LR+RR QIRDVFR+VD GKSG LGV+DLL NT ALGLKLDR EAAALVSMLD +GD++I C ELE+ALR YRRY WER RW+ RKPFHEE+PSL LF R P GGG G RN A KV+R D+V ALVRLRG SSG G + + + +R R+L A RK+ CC AGVRT A TLA FDFGP DEA AGRMR VD+WHWLRLLSAP E S GG+ V G + ++ R K + Q GRNK GG + + SGRLL++EET+L+LDA+E + + + RD A VSVP W+LL +HVPGLWDRE E E RR+ + + A + + AA +Q AVR+RQ
Sbjct: 3 MRLLSPGEQGIIDHVLETFAAQVDGKSMRTRDFFNLMDSNRDNVLTRSELKEALVNRQLVLRDDQLTHLMAFLDVHGHGYVTLGDLHDGLRNFRA-----ARHRTKIH--GQSTRL---PRPQPRPPLDSTAVTRLQSALLAPLTLFSAQAPVEGQGKHQRYKKNASEKRILEQEAGINFLDITDPEISSLADFLMDAEKAGGRPQGGLPSNPADHIPTTDAQQSKALRPLPLIMAALESAASRAP--GCINRDGQQTGGIRGPGAAAVPCSAARVLWILRGLQRVWRQKDR----RRKAKTLIQESADEFTDEKLSVAVSLFDVDGQGHIDLQDVMTVFRNARVDKFVRGRLPAAAIPSLVAIGRHLESRKITAHDFVQDAATSTIVHSSEPTPKRKRDAKR----DQTQTATTAQLGALLFSELQLDAKQRNLVLECIEEDGLVSGANVAGAVRRARGELAHRKLERLEQQQGVVDGGRCWSSETGSQVSEISGSTCSIISPPRFRPQAGAAPTAEEGMLAPLQHKHQRDG------FNQSDASLILGLFVKEGGGLRNLTGKSAASLWRGLKRRGRGVHACEDGRSAARRLRQLLESRDMKPHRWFATLGPTAESSAPSDE-------RSSMERRVEMSSIIQGVQAL------------------------------------GGTTRTGPPG--EANTVHTASD----DERATDSLEGTLSS-NDGSYS-------------------------------STAQTAG-------------------------------------------------------------------------------------KNYKAQRTVQKLDELMSLQGRRLVVEFHQADTNRSGGVDPTELKKVMKNLLQPCSLLRFERKRRRERQEAAAATSQNAERWKGDFMEKMEALDKSKASNFLDVISTALRNRRWQIRDVFRDVDKGKSGALGVNDLLENTHLALGLKLDRGEAAALVSMLDTNGDKSIHCEELELALRLYRRYGWERHRWSRRKPFHEEFPSLSCLFRRT------PRAEGGGAG---LQQQQRNPALPRDTKVNRGDIVTALVRLRGSSSGGAVGGNRGRGQLLPAHGPNVQRRRVLLRAVRKVAHCCQTAGVRTAPALLATLAYFDFGPVDEARRKAGRMRAVDLWHWLRLLSAPAEDS-GGSVV---GGSCNNNANRTKGVHGQRRKKDVLC--GRNKSIYGFGGXXXXXRGGAHKTVDEMVSGRLLDAEETALLLDALELRTRVQEARDAPAT--GATEDGPIVSVPAFWDLLVEHVPGLWDRELQERLEAEEARRVVRDER----AAAEEKAKAATTVQKAVRRRQ 1166
BLAST of mRNA_D-dudresnayi_contig987.28683.1 vs. uniprot
Match: A0A7S2C0N4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C0N4_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 5.530e-10 Identity = 49/178 (27.53%), Postives = 89/178 (50.00%), Query Frame = 1
Query: 2593 IRRIDELMSKQGKRLVDEFHHADTNDSGGVDHAELKRAIENLVRPCPLVRFERKRRQERLAEAMAAANQAESWREDFVQRMEALHRSKASHFLEAVSAELRHRRLQIRDVFREVDVGKSGGLGVDDLLNNTQRALGLKLDREEAAALVSMLDVDGDQAIQCNELEIALRQYRRYRWER 3126
+R++D + ++G R+ D F D + G + +EL + ++ L+ P P VR K R+E+ AA A ++++ A+ + A +R + + D+FR +D +D++ + +GL + RE A++ +D DG+ + ELE A+RQ+RR RWER
Sbjct: 145 LRKLDSRIKERGLRVSDIFVEMDASGDGSISGSELGQMLQTLMLPPPEVRAAMKIRKEKQEAKEAAHANALKEARAIIEKLNEAEACGANVCIGAFENHMRQNQARCVDLFRLIDQSGDDQCDLDEMCA-VMKLVGLSVSREAVKAMIDFIDKDGNGVLDAKELENAIRQFRRARWER 321
BLAST of mRNA_D-dudresnayi_contig987.28683.1 vs. uniprot
Match: A0A7S3XWU7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWU7_HETAK) HSP 1 Score: 60.5 bits (145), Expect = 5.190e-7 Identity = 37/95 (38.95%), Postives = 56/95 (58.95%), Query Frame = 1
Query: 2830 RMEALHRSKASHFLEAVSAELRHRRLQIRDVFREVDVGKSGGLGVDDLLNNTQRALGLKLDREEAAALVSMLDVDGDQAIQCNELEIALRQYRRY 3114
RM A R+ A L A+ ++H +L+I+D+FR+VD +SG + +L R L L L + +LV+ LD GD ++ +ELE ALR YRR+
Sbjct: 4 RMAAARRTGAFEVLAALDKRMQHYQLRIKDLFRQVDTNQSGEIDAQEL-RAALRLLRLPLGDPQLFSLVAFLDAGGDGLVEGDELEAALRDYRRF 97 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig987.28683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig987.28683.1 >prot_D-dudresnayi_contig987.28683.1 ID=prot_D-dudresnayi_contig987.28683.1|Name=mRNA_D-dudresnayi_contig987.28683.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=1554bp MRRLTFAEQEGVARAMEVFAAQVDGKAMGDRDLFNLVDRDRNDILTRSEVback to top mRNA from alignment at D-dudresnayi_contig987:7757..17623+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig987.28683.1 ID=mRNA_D-dudresnayi_contig987.28683.1|Name=mRNA_D-dudresnayi_contig987.28683.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=9867bp|location=Sequence derived from alignment at D-dudresnayi_contig987:7757..17623+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig987:7757..17623+ >mRNA_D-dudresnayi_contig987.28683.1 ID=mRNA_D-dudresnayi_contig987.28683.1|Name=mRNA_D-dudresnayi_contig987.28683.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=9324bp|location=Sequence derived from alignment at D-dudresnayi_contig987:7757..17623+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |