mRNA_D-dudresnayi_contig9860.28672.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9860.28672.1
Unique NamemRNA_D-dudresnayi_contig9860.28672.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9860.28672.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9860contigD-dudresnayi_contig9860:3939..9711 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score77.8
Seed ortholog evalue5.5e-12
Seed eggNOG ortholog2880.D7FR90
KEGG koko:K03671
KEGG Pathwayko04621,ko05418,map04621,map05418
EggNOG free text desc.cell redox homeostasis
EggNOG OGsCOG0526@1,KOG0907@2759
COG Functional cat.CO
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-08_004950.1
Exons2
Model size532
Cds size513
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9860.28672.1prot_D-dudresnayi_contig9860.28672.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9860 3957..9711 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930945.612188-UTR-D-dudresnayi_contig9860:3938..39561622930945.612188-UTR-D-dudresnayi_contig9860:3938..3956Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9860 3939..3956 +
1690557975.3699734-UTR-D-dudresnayi_contig9860:3938..39561690557975.3699734-UTR-D-dudresnayi_contig9860:3938..3956Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9860 3939..3956 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930945.6334445-CDS-D-dudresnayi_contig9860:3956..42921622930945.6334445-CDS-D-dudresnayi_contig9860:3956..4292Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9860 3957..4292 +
1690557975.3800354-CDS-D-dudresnayi_contig9860:3956..42921690557975.3800354-CDS-D-dudresnayi_contig9860:3956..4292Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9860 3957..4292 +
1622930945.6543143-CDS-D-dudresnayi_contig9860:9534..97111622930945.6543143-CDS-D-dudresnayi_contig9860:9534..9711Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9860 9535..9711 +
1690557975.3884678-CDS-D-dudresnayi_contig9860:9534..97111690557975.3884678-CDS-D-dudresnayi_contig9860:9534..9711Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9860 9535..9711 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9860.28672.1

>prot_D-dudresnayi_contig9860.28672.1 ID=prot_D-dudresnayi_contig9860.28672.1|Name=mRNA_D-dudresnayi_contig9860.28672.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=171bp
MAPVAYVDNKDHIERLVAEKNKLVVRCFAEKEKGRGETAGQQDDDVDEVT
AVAEVAASFDSVLFCSVDLLSHADVTTSVLAASGGGGGGETRGRADATPL
VSCWMFFNAGKLAYIASDSTPRARISRLVALLDRSPGTLDQLSHQDEVSR
RQQRIRVEANRDSAAGETEEA
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mRNA from alignment at D-dudresnayi_contig9860:3939..9711+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9860.28672.1 ID=mRNA_D-dudresnayi_contig9860.28672.1|Name=mRNA_D-dudresnayi_contig9860.28672.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=5773bp|location=Sequence derived from alignment at D-dudresnayi_contig9860:3939..9711+ (Desmarestia dudresnayi DdudBR16 monoicous)
TGTTGATCATTTTGCAGCATGGCGCCAGTTGCCTATGTCGATAACAAGGA
TCACATAGAACGTTTGGTTGCTGAAAAAAATAAGCTGGTCGTTCGGTGCT
TTGCGGAGAAAGAGAAAGGCAGAGGCGAGACTGCTGGCCAACAAGATGAT
GATGTTGATGAGGTGACAGCTGTTGCAGAGGTTGCGGCAAGTTTTGACTC
GGTTTTGTTCTGCAGCGTCGATTTGTTGAGCCACGCGGATGTAACTACTT
CTGTCCTAGCGGCCTCAGGAGGAGGAGGGGGAGGGGAGACGCGGGGAAGA
GCAGATGCAACCCCTCTGGTGTCATGCTGGATGTTTTTCAACGCTGGGAA
ATTGGTGAGCACTGGAGAGACATGTGATATGTATATCATTCAGCAAGTCT
TGGCGTACTGGTAGGGGTGTTTTGGTGTAGTCGGTTCTCGTACAAAGCTC
TACTCTCTCACCGCCAGCTGGATTCCTGGTGTGGCGTTGCGGCGAGCGGC
AACATTATTGGCGGATCCCAAAGACGATGGATCCTACTTTATCCGTTCTA
TCCACTACGTCGCAGCAATTTCCTGCAAGTAAAGCGCTTTCTGTTGATCT
TTCCGTGGTGCCAGCTTCTACGCTTGTATGATGCAGCTTCTGCGCTTGTA
TGATGCGACCTTCTTCACCATGTTGATGTTCTGCACTCCTCCAGGGCTCT
ACCGTACTGGTGTAAGTAACTCTTCGGCGATCATACATACTCGTATCAGT
AGCTCTACGTAGTCTACTTAGTACCTCAACTATACTACTTGTCTTTTGCC
GCATAAACGTGTCCGATAATGCGCAATTTCCATTCGCGAGGAAATCGTTG
ACAAACAGGTAGGTTGCACTGTTGTATTCTTGTGTCCTTCACATTAAAAC
CGGTCTTTCTACGCTGATGGACCCAGCACATCCTTAGGCACCGCTCCCAT
ACTCGTATGGAGGGATACTTGTATTTATGGACCGTGAAGATTTCATCCAA
TCACAGGCTCGTAGTTGCAAGGAAATCCGGCCGCATATCACCAATAAATG
ACGAGGTTTGTAAGGACTTTATAAGGACGCAAGAATGACCGATCGTGCCG
TTACCGAGATGTGCCGAGAGGTGGCCGGCGCTCGGCGAGAGTGAGAGAGA
GACAGCAGCGTGCAGCTCAGACAAACGACGCCGCAGCGGGCGGCCCAACA
CCAACACCATGCTGGTGTCGCGGTATGTCTCTGCTGTAGTATAATATGGC
TAGTTGCGTTCCTCAGGGCCTGCGACCTGTCCCTGAGGGTAGAACAGGCA
GTCAGTGCCGGTGCAGTCTGTGTCCCTCCACCCAGAGACACGCAGCTGGC
AGCTGCGCGCGTGGACCAAGCGCACAGCACTAGACTTCAGCGAGAAGAGG
CTAGCATACCATCGCCGAGTGCCAACGCGCCATCACCGAGTGCCAGCGCA
CTATCTCCAAGCGCCCCCAACAGCAGCAGATAGGCGGAGGTCGTGATGGT
GGAGGCAGCAGTGGAGGCAGTGGCGGTGGTGGGACAGAGTACAAAGTGCA
ACTTATTATGTTCATCTAGCAGCGGCAGCGGCAAGCAGCAGCAGCAGCAG
CTCGAGAGTGTCACCGCAGCACCGATTCATCGAGAAGATCGAGAGCAAAG
CCAAAGTCAGCAGTGAACACAAACACGGCAATCGGGGAGTCGAGCCTACT
TTTTTTTATTGTTGTGTTGCGCATTGCCTATTTTTGCCGCGCTATGATAC
GACTACGCGCAGAACTTCCCGGCCGATCATCATAAAACTGTAACCGAGAC
CGTCGCTTCAGTCGTTTATGCCTATTGACACTGCTGCATGTACTACGTCC
ACTTTCACTACTGTAGGGGTGGGGCACAATGGTGACGAATAGTGGACACA
AATACACACACACACACTCGCAGAAGGAGAAATAAAAAATGCCACCGGAA
AATAAAAACGAAACGTCTGTGCTGGGGATCGAACTTGTGCCACTCGCGCT
ACAAGTAGGATTAAATGTAATGAATTTAATTGCTTTGTAAACCATCCCTA
TGTATAATATGGGCGTTGAGCCCGTCCTTATTTCATTGTACGGAGTACGG
ATATACCCGACAGCCTGCGTGGTCTATGGCCCATGCTTGCTGTACAGCAC
AGCTGTTGTCCATGCCATGTAGAGCTATATGGTATCGTATTTACTTATCA
CGTATCACAGAGCTCTATTTTGCAGGGCTGTTCACGGGCCGGCTGCACAG
TACCGGGCCGGGCCGGCCCGGAATTTTTTTAGATCTCCAAACCCGGCCCG
GCCCGGCCCATAACTTTTCGGACAAACCCGGGCCGGCCGATCGGAGTAAA
TTTCACGAGCTTCGGCTCGTATATTCGGGTTGACATACGGGCCGGGTCGC
CGTGACCCGTGAGAGAAGCCCAACGGCCCGCGAGAAGAGGCCCACGGGCC
GATGGAACCAAACTCACGGGTCACCATGGGTCACCGCGCGAAAGTGCGTG
GGTTCAGTCGCTACTTTGTCCTACTTTGGACTCTCCGGTGCATTTTCGCC
GTTAAAAAGAGTGAAAGCTGCTTTCATTTTTTTTTTTTGCATGAAAATGT
GTTTTTTTATTTTCCATGTTCATTTTTCCTTTTGGCATTTTTCATTTTTG
TCCTATTTCTTTTGATTTTTATTCCTTGAAAAGGCCAGATCCACAACCAC
AAAAACAAAAAACGCGAAAACCATATTCTGCAACAGTATCATTCACGATT
TTTTATGGGTCAGACACGGGCCGGCCCATGGATCAGCCCGTAAAATTGCG
TGGGCCGCCGTACGGATCACTGCGGCCCGTCCCGTGGGAAAACCGCATCT
CACGGGCCGCGGGCCGGCCCGGCCCGGCCCACCGGCCCGTAAACAGCCCT
GCTATTTTGCGTCACCTGGGCATGGCAGCATGAAACGCAGCACAGCTTTT
TTTCTCGCCGGATCAACACTACTATGGTCAGGGCAACAGGTGGTATCATA
CAAGCACGATTTTTTCCATACGATTTCCCACTACGACGATAGAAACATAT
ATACGATGATGTTGATGCCCTAACGGCGAAGCACTCTTTTTTCTTATCTT
GCGTACAGTATCTGATTTCTTCCATCCCGGTTTTCTCGACCGCCCATACA
CCTTAGAGCGCGCTTCTTTGCGGAACGCTGTTGGCTACCCTCCCTGAAGA
GGCTCAGCCGCACGCGCGACCCCGCGTGCGAAGCTGACCGCGCCAGCCGC
CGCAACAGAGTGCAAATAGCTCCTTCCCGAGGCGTTCTTTGTTCCTTAGG
AATGCTAAGTACGTACCTGCATACCCGTAGCTGCACCAGAGCCCAGAGCA
ACAGCTGTACAGTACTACAGTAGCACACTACCCGCAACAGCCGTACTGTC
CAGCTCCCTCACGTCCAAGCTGACACAGTCATCTCGGGCATGGCCAACTG
CCAGCTCCTTGAGCAGCTGTCTCTGTCTTATGCTATCGTTGTTTCACAGA
AAGATGTGTGATGTCGTCCTTTGCAAAACTGCGTAGTTGCACCGCAACCG
AACAGCATCATCGTAGTCTGGTCGTGACGCAACAACGTCAGTGCGTCTTC
TTCTTGCAACGCACAAAGCGCCACAGTAGTGACGGCTCTGTCATACTATC
GTTGTTTCACAGAAAGGTCTATACATACATGCTATGTGTGCTCTGTTAGG
TGTTGCACCACAAGTCTGTCAAAACACTATTTGGTGTCTCCTCGCTGGAA
CCACGTGCAAACCAACTCAACAACCATGGTGCAGTTTTTCGACCAAGCAA
GCGCAAGCCGCCACAGCGATGACGTTTGAAAGCTGACATGGCCAATTAAT
CCGCGGCCAATTTTCTGTCCCGTTCCTTGTGTCTTCTCTATCTCGGGTGT
CACTGAAGGCGAGTTGAGAAAGGACGGTTGATTGGTCTGTTGTCTGCACT
CAGTCAGCTGGTAAAAGCTGTCATCATTGATTTCAAAGAGTAGTACAACA
GTATTGATAGTATCATAGTCACGGCGCAACAACAGGGCGTATTTTTTTCT
TGCAACGCACAAGCCGCCACAGTGACGAAATCTTAACGCTGACTAGCGTA
ACCGTGTTCAGGCATGGCCAACTTTCAGTTCCTTTCATAGCTTCTGCCTC
TTCGTGGAGAACTGTAAAACAACCAAAACACCAGGCAATAACCAAAACAA
AATGAGGTCGTACGGCTACGAACTCTGTACTACTGCTTCTACTACAACAA
CAGTACTACTGTTGCTGTCTGTCGCACCGTGCTCTTTGTTTTTTGTCTGA
GTTCGAACCTCCTCGCCGGTGTCGTCTTTGTTTTCTGACACGACATGCCC
CTTTTTGTATTTTTTTTAATATTTCAACGCGCACGGCCTGCTGCAGGTAA
TGAGGTGCGGTACTGCCGGCGCACCTCATTGTCCACTGCTATTTTTATTG
CTCGAGTATTATTTTTAGTATTGCCCCGTCCCTCTCCATAATCCTACAGT
AAATGCCAACTACCTCGAACACGATAATTAAGCATTAAAACACTTGGCAC
TATATCGTCCCCTACGAAAGTGAAAATTGATTATTGTCTTGAATTAATTA
ATTTATTGGCGTTTCATACTATTAATAGAATTTCTACCTACTACCTACTA
CTACTACTATACCACCACTACTACACAACAGCTATACCACTACAGTAGTA
GTAATATATATATATTAGTTAGTTATGTATTAATTATAATATATGATTCT
CTTTTTTGCTCTGATATTTTCACCACAACTTTACAAACGCTTCCTGCACA
ATGCTCATTATAACGTAATGACCACTCTGCCTCTGAACCACAACGAAAAA
ACCTTACCGAAGCACTCGGGCCAGCGGCAGCCGTGCCTTTGTATATGTAT
ACCGTATATGTATTTCTTATTGCAACCGCTCTATCGGTCAAGGGCTCTCT
GAGCAAGCCGTGGTCACAAAGGTGGTCTCCCCCTCCCCCCCCCCCTTCCC
CCGGTACTTGCCTGGGATTTGACTGCTGCACGCACTCTAATATCCCGCTA
TGGTTCCGTAAAAGTTATCCCTCTCACCTTCGGTAATATTATTGCAAGAC
CTCGATTGAAGGCGATGCATGCATTCGTAGATTCTCCCAGAGTAAAGCCA
GGCAGTTGACCCTATTGTACAACAGTAGCAGTAGTACCCTACTCGATCGA
ATCACACGACAGGCCTATTATAGCACGCATTTTGAGAGGACCTGGACTCT
TATCTGTCTGACGTGTATCATACTATACGTTATCCACGCCTCTTATGTGA
AATTCATTGTCTGGTGCTATAATAAGCCAGCCTTATCGTTTTTTGTAGCT
CGGATCTCTTTAGGACATTCGTTTTTATTATACTTCGTATGATTTTTAAT
AGTAACAACGCGGGCTATTGGACAGTTCGGAAAATTCGTATCACCACCCC
TACTATAACGAACACACTGTAATAGTATCAGAGAGTCAAAACCACTCTTT
AAGATCTGAGCTACAAAAACGCTAGCACCTACTAAAAAACGTTAACGCCT
ATTGACTTATACCACTACTGCTACTACTGTGTGCTGACACAACCAGGCGT
ACATCGCGTCCGACTCCACCCCACGGGCTAGGATCTCGCGTCTCGTCGCT
CTACTCGATCGCAGCCCCGGTACCCTGGATCAGCTTTCCCACCAGGATGA
GGTATCTCGGCGTCAGCAACGCATCCGAGTGGAAGCAAACCGCGACTCGG
CGGCGGGGGAGACGGAGGAGGCG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9860:3939..9711+

>mRNA_D-dudresnayi_contig9860.28672.1 ID=mRNA_D-dudresnayi_contig9860.28672.1|Name=mRNA_D-dudresnayi_contig9860.28672.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1026bp|location=Sequence derived from alignment at D-dudresnayi_contig9860:3939..9711+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGCGCCAGTTGCCTATGTCGATAACAAGGATCACATAGAACGTTTGGT
TGCTGAAAAAAATAAGCTGGTCGTTCGGTGCTTTGCGGAGAAAGAGAAAG
GCAGAGGCGAGACTGCTGGCCAACAAGATGATGATGTTGATGAGGTGACA
GCTGTTGCAGAGGTTGCGGCAAGTTTTGACTCGGTTTTGTTCTGCAGCGT
CGATTTGTTGAGCCACGCGGATGTAACTACTTCTGTCCTAGCGGCCTCAG
GAGGAGGAGGGGGAGGGGAGACGCGGGGAAGAGCAGATGCAACCCCTCTG
GTGTCATGCTGGATGTTTTTCAACGCTGGGAAATTGATGGCGCCAGTTGC
CTATGTCGATAACAAGGATCACATAGAACGTTTGGTTGCTGAAAAAAATA
AGCTGGTCGTTCGGTGCTTTGCGGAGAAAGAGAAAGGCAGAGGCGAGACT
GCTGGCCAACAAGATGATGATGTTGATGAGGTGACAGCTGTTGCAGAGGT
TGCGGCAAGTTTTGACTCGGTTTTGTTCTGCAGCGTCGATTTGTTGAGCC
ACGCGGATGTAACTACTTCTGTCCTAGCGGCCTCAGGAGGAGGAGGGGGA
GGGGAGACGCGGGGAAGAGCAGATGCAACCCCTCTGGTGTCATGCTGGAT
GTTTTTCAACGCTGGGAAATTGGCGTACATCGCGTCCGACTCCACCCCAC
GGGCTAGGATCTCGCGTCTCGTCGCTCTACTCGATCGCAGCCCCGGTACC
CTGGATCAGCTTTCCCACCAGGATGAGGTATCTCGGCGTCAGCAACGCAT
CCGAGTGGAAGCAAACCGCGACTCGGCGGCGGGGGAGACGGAGGAGGCGG
CGTACATCGCGTCCGACTCCACCCCACGGGCTAGGATCTCGCGTCTCGTC
GCTCTACTCGATCGCAGCCCCGGTACCCTGGATCAGCTTTCCCACCAGGA
TGAGGTATCTCGGCGTCAGCAACGCATCCGAGTGGAAGCAAACCGCGACT
CGGCGGCGGGGGAGACGGAGGAGGCG
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