mRNA_D-dudresnayi_contig984.28650.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig984.28650.1
Unique NamemRNA_D-dudresnayi_contig984.28650.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig984.28650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig984contigD-dudresnayi_contig984:21629..22270 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size294
Cds size294
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig984.28650.1prot_D-dudresnayi_contig984.28650.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig984 21629..22270 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930942.6004822-CDS-D-dudresnayi_contig984:21628..216821622930942.6004822-CDS-D-dudresnayi_contig984:21628..21682Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig984 21629..21682 -
1690557974.2353237-CDS-D-dudresnayi_contig984:21628..216821690557974.2353237-CDS-D-dudresnayi_contig984:21628..21682Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig984 21629..21682 -
1622930942.637693-CDS-D-dudresnayi_contig984:21850..219761622930942.637693-CDS-D-dudresnayi_contig984:21850..21976Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig984 21851..21976 -
1690557974.2458017-CDS-D-dudresnayi_contig984:21850..219761690557974.2458017-CDS-D-dudresnayi_contig984:21850..21976Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig984 21851..21976 -
1622930942.671983-CDS-D-dudresnayi_contig984:22156..222701622930942.671983-CDS-D-dudresnayi_contig984:22156..22270Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig984 22157..22270 -
1690557974.2570758-CDS-D-dudresnayi_contig984:22156..222701690557974.2570758-CDS-D-dudresnayi_contig984:22156..22270Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig984 22157..22270 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig984.28650.1

>prot_D-dudresnayi_contig984.28650.1 ID=prot_D-dudresnayi_contig984.28650.1|Name=mRNA_D-dudresnayi_contig984.28650.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=98bp
STSGFGNLNLIIYQIAGGAAPLTLQNSPKTKSFVSKLKRELTEHTLCLSS
VYNAPLHTICALPQQSDGLDAHFRLQLQQQVYGHMWARLETDVKLMSE
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mRNA from alignment at D-dudresnayi_contig984:21629..22270-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig984.28650.1 ID=mRNA_D-dudresnayi_contig984.28650.1|Name=mRNA_D-dudresnayi_contig984.28650.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=642bp|location=Sequence derived from alignment at D-dudresnayi_contig984:21629..22270- (Desmarestia dudresnayi DdudBR16 monoicous)
AGTACCAGTGGCTTTGGCAACCTCAATCTGATCATCTATCAGATTGCTGG
GGGAGCTGCCCCACTTACACTACAAAATAGTCCGAAAACCAAAAGTTTTG
TTTCCAAACTTAAGGTATGTTATACAATGCATACTATACTATATTGTATA
ATATTATAACTTACATATATATAATATTATTATAGTATTTATAGCAACTA
TTTATCTGTACACAGTTTTATAGTATATTTTATATTGATATGCATTGTAT
AGTATACTACTGTATATGTTCTAACGACTATTTATATGTTACAGAGGGAA
TTGACAGAGCACACACTATGTCTCAGCTCCGTATATAATGCGCCTTTACA
CACAATATGCGCTCTACCACAGCAAAGTGATGGGCTTGACGCACATTTCA
GGTTACAACTGCAGCAGCAGGTATGTACTATTGTACTACTGTACTATATA
TACTGTGTTATAATTTGTATGCATACTATATATACTATATACTATACTGT
TTCTGTTAATATGCACACTTTATACTGTTTGTTGCTATTAATATGCACAC
TGTACACTGTACTACTACTTGTATAACGCATATTGTAGGTATACGGGCAC
ATGTGGGCCAGACTGGAGACTGACGTAAAGCTAATGTCGGAG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig984:21629..22270-

>mRNA_D-dudresnayi_contig984.28650.1 ID=mRNA_D-dudresnayi_contig984.28650.1|Name=mRNA_D-dudresnayi_contig984.28650.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=588bp|location=Sequence derived from alignment at D-dudresnayi_contig984:21629..22270- (Desmarestia dudresnayi DdudBR16 monoicous)
AGTACCAGTGGCTTTGGCAACCTCAATCTGATCATCTATCAGATTGCTGG
GGGAGCTGCCCCACTTACACTACAAAATAGTCCGAAAACCAAAAGTTTTG
TTTCCAAACTTAAGAGTACCAGTGGCTTTGGCAACCTCAATCTGATCATC
TATCAGATTGCTGGGGGAGCTGCCCCACTTACACTACAAAATAGTCCGAA
AACCAAAAGTTTTGTTTCCAAACTTAAGAGGGAATTGACAGAGCACACAC
TATGTCTCAGCTCCGTATATAATGCGCCTTTACACACAATATGCGCTCTA
CCACAGCAAAGTGATGGGCTTGACGCACATTTCAGGTTACAACTGCAGCA
GCAGAGGGAATTGACAGAGCACACACTATGTCTCAGCTCCGTATATAATG
CGCCTTTACACACAATATGCGCTCTACCACAGCAAAGTGATGGGCTTGAC
GCACATTTCAGGTTACAACTGCAGCAGCAGGTATACGGGCACATGTGGGC
CAGACTGGAGACTGACGTAAAGCTAATGTCGGAGGTATACGGGCACATGT
GGGCCAGACTGGAGACTGACGTAAAGCTAATGTCGGAG
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