mRNA_D-dudresnayi_contig982.28622.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig982.28622.1
Unique NamemRNA_D-dudresnayi_contig982.28622.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig982.28622.1 vs. uniprot
Match: A0A7S3HR21_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HR21_9STRA)

HSP 1 Score: 260 bits (664), Expect = 1.520e-84
Identity = 124/184 (67.39%), Postives = 152/184 (82.61%), Query Frame = 3
Query:  153 AQDKESIREIA---DADDEFEALKHSSTIVTPTIAPTKYARNFVAGFKILSMNMRDAYSGKLLWTAGTWSAEDMFEREIKEEIPQEVLKCKAVAREIIFSSAEEVRGFRLRQKVFFQGTCIEEWHFQFGFVIPGSTNTWQQTIDAAPPSEMLPAQVLSGNVVFETSFYDGEEFLCKNSVRLFYV 695
            +Q+K  +RE+    +ADDEFE LK++ T V P IAPTK+A+NFV GFKI+SMNM+D  +GK LW A  W+AEDMF  EIKEEIP+EVLKCKA++REI F S E++ GFRL+Q+V+F GTCIEEW F FGFV+P STN+WQQTIDAA P EML A+ LSGNVVFETSFYDG+EF+CKNSVR++YV
Sbjct:   56 SQEKAVLRELEQDMEADDEFEKLKNTQTEVEPVIAPTKFAKNFVQGFKIVSMNMKDMETGKELWKAKNWTAEDMFHNEIKEEIPKEVLKCKAISREITFHSEEQLDGFRLQQRVYFMGTCIEEWFFAFGFVMPNSTNSWQQTIDAAAPEEMLSAEALSGNVVFETSFYDGDEFMCKNSVRIYYV 239          
BLAST of mRNA_D-dudresnayi_contig982.28622.1 vs. uniprot
Match: A0A2R5GDW4_9STRA (Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GDW4_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.690e-52
Identity = 88/172 (51.16%), Postives = 116/172 (67.44%), Query Frame = 3
Query:  177 EIADADDEFEALKHSSTIVTPTIAPTKYARNFVAGFKILSMNMRDAYSGKLLWTAGTWSAEDMFEREIKEEIPQEVLKCKAVAREIIFSSAEEVRGFRLRQKVFFQGTCIEEWHFQFGFVIPGSTNTWQQTIDAAPPSEMLPAQVLSGNVVFETSFYDGEEFLCKNSVRLFY 692
            E  +AD E+E LK         ++    A+  + GF+I  M MRDA SG+L+W +  W  +DMFERE++  +P  +L C+AVAREI F+S E +  FRL Q+V+FQG C+EEW F FGFVIPGSTNTW+QTI AA  S MLPA ++SG +  ETSFYD   F+ K+ VR+FY
Sbjct:   45 EDLEADAEWELLKRKKRQGEIRVSSNPAAQRILRGFRINHMRMRDAESGRLMWRSEEWG-DDMFEREMEAHVPASILDCRAVAREINFTSEEAMNKFRLEQRVYFQGVCMEEWFFNFGFVIPGSTNTWEQTIYAAEKSAMLPAHLISGQITIETSFYDDNLFVSKSLVRIFY 215          
BLAST of mRNA_D-dudresnayi_contig982.28622.1 vs. uniprot
Match: A0A7S2V4X0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4X0_9STRA)

HSP 1 Score: 176 bits (446), Expect = 7.310e-52
Identity = 84/178 (47.19%), Postives = 118/178 (66.29%), Query Frame = 3
Query:  159 DKESIREIADADDEFEALKHSSTIVTPTIAPTKYARNFVAGFKILSMNMRDAYSGKLLWTAGTWSAEDMFEREIKEEIPQEVLKCKAVAREIIFSSAEEVRGFRLRQKVFFQGTCIEEWHFQFGFVIPGSTNTWQQTIDAAPPSEMLPAQVLSGNVVFETSFYDGEEFLCKNSVRLFY 692
            DK  + E  +A+ E+    ++    +  ++    A   + GF I  MNM+DAYSG+++W + +W +E MFE E+   +P  +L C+AVAREI FSS ++++ F L Q+V+F GTCIEEW F+FGFVIP STNTW+Q I+AA P  M+   +LSGNV  ET+F DG  FLCK  VR+FY
Sbjct:   38 DKSYVDEDEEAEREWNLKLNAPQKGSIAVSQNPQASRIMKGFTINWMNMKDAYSGQIVWESDSWGSE-MFETEMSAYVPSSILNCRAVAREINFSSVDQIKDFNLEQRVYFNGTCIEEWFFRFGFVIPNSTNTWEQIIEAADPENMMDPTILSGNVTIETTFLDGSIFLCKTLVRIFY 214          
BLAST of mRNA_D-dudresnayi_contig982.28622.1 vs. uniprot
Match: A0A6P7THW4_OCTVU (Phosphodiesterase delta-like protein n=3 Tax=Octopus TaxID=6643 RepID=A0A6P7THW4_OCTVU)

HSP 1 Score: 169 bits (428), Expect = 4.630e-50
Identity = 80/147 (54.42%), Postives = 113/147 (76.87%), Query Frame = 3
Query:  261 ARNFVAGFKILSMNMRDAYSGKLLWTAGTWSAEDMFEREIKEE--IPQEVLKCKAVAREIIFSSAEEVRGFRLRQKVFFQGTCIEEWHFQFGFVIPGSTNTWQQTIDAAPPSEMLPAQVLSGNVVFETSFYDGEEFLCKNSVRLFYV 695
            A + + GFK+  MN+RDA SGK+LW     S++D+    ++ E  +P+++LKC+AV+REI FSSAE +  FRL QK+ F+G C+EEW+F+FGFVIPGSTNTWQ TI+AAP ++M+PA +L+GNVV ETSF+DG+  +  + VR+FYV
Sbjct:    5 AEDIMRGFKLHWMNLRDADSGKILWQ----SSDDLSLPNVEHEARVPKKILKCRAVSREINFSSAEPMDKFRLEQKIMFKGKCLEEWYFEFGFVIPGSTNTWQSTIEAAPENQMMPANLLNGNVVIETSFFDGDLLVSTSKVRIFYV 147          
BLAST of mRNA_D-dudresnayi_contig982.28622.1 vs. uniprot
Match: A0A8C9S0N0_SCLFO (Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta n=4 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9S0N0_SCLFO)

HSP 1 Score: 168 bits (426), Expect = 1.020e-49
Identity = 83/147 (56.46%), Postives = 111/147 (75.51%), Query Frame = 3
Query:  261 ARNFVAGFKILSMNMRDAYSGKLLWTAGTWSAEDMFEREIKEE--IPQEVLKCKAVAREIIFSSAEEVRGFRLRQKVFFQGTCIEEWHFQFGFVIPGSTNTWQQTIDAAPPSEMLPAQVLSGNVVFETSFYDGEEFLCKNSVRLFYV 695
            A+  + GF++  MN+RDA SGK+LW  GT   +D+   E++ E  +P+++LKCKAV+RE+ FSSAE++  FRL QKV+F+G C+EEW F+FGFVIP STNTWQ  I+AAP S+M+PA VL+GNVV ET FYD E  +  + VRLFYV
Sbjct:    8 AKEILKGFRLNWMNLRDAESGKVLWQ-GT---DDLSMPEVEHEARVPKKILKCKAVSRELNFSSAEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPANVLTGNVVIETKFYDDELLVSTSKVRLFYV 150          
BLAST of mRNA_D-dudresnayi_contig982.28622.1 vs. uniprot
Match: A0A7S2FRT7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FRT7_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.690e-49
Identity = 80/138 (57.97%), Postives = 104/138 (75.36%), Query Frame = 3
Query:  279 GFKILSMNMRDAYSGKLLWTAGTWSAEDMFEREIKEEIPQEVLKCKAVAREIIFSSAEEVRGFRLRQKVFFQGTCIEEWHFQFGFVIPGSTNTWQQTIDAAPPSEMLPAQVLSGNVVFETSFYDGEEFLCKNSVRLFY 692
            GF I SMNMR+A +G++LW +GTW  E MFE+E+   +P+ +L CKAV+REI F+S  E++ FRL QKVFFQG  +EEW F FGFVIPGSTN+WQQ I AA   EM+  ++LSGN+  ETSF+DG  F+ K+ VR+FY
Sbjct:   20 GFSINSMNMRNAQNGRVLWESGTWGRE-MFEQEMDAHVPRSILACKAVSREINFTSMSEMKAFRLVQKVFFQGMVMEEWRFDFGFVIPGSTNSWQQVIKAA--DEMMDPELLSGNITIETSFFDGASFIAKSLVRIFY 154          
BLAST of mRNA_D-dudresnayi_contig982.28622.1 vs. uniprot
Match: A0A1S3JTL5_LINUN (Phosphodiesterase delta-like protein n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JTL5_LINUN)

HSP 1 Score: 167 bits (424), Expect = 1.860e-49
Identity = 81/147 (55.10%), Postives = 110/147 (74.83%), Query Frame = 3
Query:  261 ARNFVAGFKILSMNMRDAYSGKLLWTAGTWSAED--MFEREIKEEIPQEVLKCKAVAREIIFSSAEEVRGFRLRQKVFFQGTCIEEWHFQFGFVIPGSTNTWQQTIDAAPPSEMLPAQVLSGNVVFETSFYDGEEFLCKNSVRLFYV 695
            A + + GFK+  MN+RDA SGK+LW     S++D  M E+E +  +P+++LKCKAV+RE+ FSS E +  FRL QKV F+  C+EEW+F+FGFVIPGSTNTWQ  I+AAP S+M+PA VL+GNV+ ET FYDG+  +  + VR+FYV
Sbjct:    5 AEDILKGFKLNWMNLRDAESGKILWQ----SSDDLSMPEKEHEARVPKKILKCKAVSRELNFSSTEAMEKFRLEQKVMFKNRCLEEWYFEFGFVIPGSTNTWQSIIEAAPESQMMPANVLNGNVMIETYFYDGDLLVSTSKVRIFYV 147          
BLAST of mRNA_D-dudresnayi_contig982.28622.1 vs. uniprot
Match: A0A673V0N3_SURSU (Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta n=4 Tax=Amniota TaxID=32524 RepID=A0A673V0N3_SURSU)

HSP 1 Score: 167 bits (424), Expect = 2.050e-49
Identity = 82/152 (53.95%), Postives = 113/152 (74.34%), Query Frame = 3
Query:  246 APTKYARNFVAGFKILSMNMRDAYSGKLLWTAGTWSAEDMFEREIKEE--IPQEVLKCKAVAREIIFSSAEEVRGFRLRQKVFFQGTCIEEWHFQFGFVIPGSTNTWQQTIDAAPPSEMLPAQVLSGNVVFETSFYDGEEFLCKNSVRLFYV 695
            A  + AR  + GFK+  MN+RDA +GK+LW  GT   ED+    ++ E  +P+++LKCKAV+RE+ FSSAE++  FRL QKV+F+G C+EEW F+FGFVIP STNTWQ  I+AAP S+M+PA VL+GNV+ ET F+DG+  +  + VRLFY+
Sbjct:    3 AKDERAREILRGFKLNWMNLRDAETGKILWQ-GT---EDLSVPGVEHEARVPKKILKCKAVSRELNFSSAEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVIIETKFFDGDLLVSTSRVRLFYI 150          
BLAST of mRNA_D-dudresnayi_contig982.28622.1 vs. uniprot
Match: W4H6L9_9STRA (GMP_PDE_delta domain-containing protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6L9_9STRA)

HSP 1 Score: 169 bits (427), Expect = 7.900e-49
Identity = 83/169 (49.11%), Postives = 108/169 (63.91%), Query Frame = 3
Query:  186 DADDEFEALKHSSTIVTPTIAPTKYARNFVAGFKILSMNMRDAYSGKLLWTAGTWSAEDMFEREIKEEIPQEVLKCKAVAREIIFSSAEEVRGFRLRQKVFFQGTCIEEWHFQFGFVIPGSTNTWQQTIDAAPPSEMLPAQVLSGNVVFETSFYDGEEFLCKNSVRLFY 692
            D + E+E ++   +I     A     +    G KI  MNMR   SG++LW +  W  +DMFERE K  +P+ +L+C +V+REI FSS EE++ FRL Q+VFF G C+EEW F FGFVIP STNTWQQTIDAA P  MLPA  +SGN+  ET FYD    + K   R++Y
Sbjct:   60 DVESEWEEIRKRPSIARIQKAVDPRGKKIADGLKINYMNMRCGDSGRMLWQSEKWG-KDMFEREQKAVVPKAILQCTSVSREINFSSTEEIKAFRLEQRVFFNGQCLEEWLFAFGFVIPHSTNTWQQTIDAAGPDAMLPADAISGNLTIETGFYDANVLIAKTVYRIYY 227          
BLAST of mRNA_D-dudresnayi_contig982.28622.1 vs. uniprot
Match: PDE6D_MOUSE (Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta n=21 Tax=Tetrapoda TaxID=32523 RepID=PDE6D_MOUSE)

HSP 1 Score: 166 bits (420), Expect = 8.250e-49
Identity = 82/152 (53.95%), Postives = 113/152 (74.34%), Query Frame = 3
Query:  246 APTKYARNFVAGFKILSMNMRDAYSGKLLWTAGTWSAEDMFEREIKEE--IPQEVLKCKAVAREIIFSSAEEVRGFRLRQKVFFQGTCIEEWHFQFGFVIPGSTNTWQQTIDAAPPSEMLPAQVLSGNVVFETSFYDGEEFLCKNSVRLFYV 695
            A  + AR+ + GFK+  MN+RDA +GK+LW  GT   ED+    ++ E  +P+++LKCKAV+RE+ FSSAE++  FRL QKV+F+G C+EEW F+FGFVIP STNTWQ  I+AAP S+M+PA VL+GNV+ ET F+D +  +  + VRLFYV
Sbjct:    3 AKDERARDILRGFKLNWMNLRDAETGKILWQ-GT---EDLSVPGVEHEARVPKKILKCKAVSRELNFSSAEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVIIETKFFDDDLLVSTSKVRLFYV 150          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig982.28622.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3HR21_9STRA1.520e-8467.39Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A2R5GDW4_9STRA1.690e-5251.16Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic ... [more]
A0A7S2V4X0_9STRA7.310e-5247.19Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6P7THW4_OCTVU4.630e-5054.42Phosphodiesterase delta-like protein n=3 Tax=Octop... [more]
A0A8C9S0N0_SCLFO1.020e-4956.46Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic ... [more]
A0A7S2FRT7_9STRA1.690e-4957.97Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A1S3JTL5_LINUN1.860e-4955.10Phosphodiesterase delta-like protein n=1 Tax=Lingu... [more]
A0A673V0N3_SURSU2.050e-4953.95Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic ... [more]
W4H6L9_9STRA7.900e-4949.11GMP_PDE_delta domain-containing protein n=12 Tax=A... [more]
PDE6D_MOUSE8.250e-4953.95Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig982contigD-dudresnayi_contig982:419..1660 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMammalia
Seed ortholog score167.5
Seed ortholog evalue7.1e-39
Seed eggNOG ortholog9402.XP_006906700.1
Preferred namePDE6D
KEGG rclassRC00296
KEGG koko:K13758
KEGG ReactionR01234
KEGG Pathwayko00230,map00230
GOsGO:0003008,GO:0003674,GO:0003824,GO:0004112,GO:0004114,GO:0004857,GO:0005095,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005929,GO:0007154,GO:0007165,GO:0007600,GO:0007601,GO:0007602,GO:0008081,GO:0008150,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009605,GO:0009628,GO:0009987,GO:0016787,GO:0016788,GO:0017016,GO:0017137,GO:0019899,GO:0023052,GO:0030234,GO:0030695,GO:0031267,GO:0031410,GO:0031982,GO:0032501,GO:0034260,GO:0042578,GO:0042995,GO:0043086,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0044092,GO:0044424,GO:0044444,GO:0044464,GO:0047555,GO:0048519,GO:0050789,GO:0050790,GO:0050794,GO:0050877,GO:0050896,GO:0050953,GO:0051020,GO:0051336,GO:0051346,GO:0051606,GO:0051716,GO:0060589,GO:0065007,GO:0065009,GO:0097708,GO:0098772,GO:0120025
EggNOG free text desc.Phosphodiesterase 6D, cGMP-specific, rod, delta
EggNOG OGs39UQD@33154,3BF72@33208,3D6NI@33213,3J80M@40674,4852Z@7711,48ZZ1@7742,4KYRM@9397,KOG4038@1,KOG4038@2759
COG Functional cat.T
Best tax levelChiroptera
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGMP phosphodiesterase, delta subunit
Ec32 orthologEc-09_000330.1
Exons5
Model size698
Cds size693
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig982.28622.1prot_D-dudresnayi_contig982.28622.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig982 424..1660 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930939.2372959-UTR-D-dudresnayi_contig982:418..4231622930939.2372959-UTR-D-dudresnayi_contig982:418..423Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig982 419..423 +
1690557972.9371533-UTR-D-dudresnayi_contig982:418..4231690557972.9371533-UTR-D-dudresnayi_contig982:418..423Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig982 419..423 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930939.2888293-CDS-D-dudresnayi_contig982:423..7071622930939.2888293-CDS-D-dudresnayi_contig982:423..707Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig982 424..707 +
1690557972.949011-CDS-D-dudresnayi_contig982:423..7071690557972.949011-CDS-D-dudresnayi_contig982:423..707Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig982 424..707 +
1622930939.3067982-CDS-D-dudresnayi_contig982:775..8701622930939.3067982-CDS-D-dudresnayi_contig982:775..870Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig982 776..870 +
1690557972.9616034-CDS-D-dudresnayi_contig982:775..8701690557972.9616034-CDS-D-dudresnayi_contig982:775..870Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig982 776..870 +
1622930939.3296075-CDS-D-dudresnayi_contig982:955..10401622930939.3296075-CDS-D-dudresnayi_contig982:955..1040Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig982 956..1040 +
1690557972.9775379-CDS-D-dudresnayi_contig982:955..10401690557972.9775379-CDS-D-dudresnayi_contig982:955..1040Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig982 956..1040 +
1622930939.349524-CDS-D-dudresnayi_contig982:1231..12721622930939.349524-CDS-D-dudresnayi_contig982:1231..1272Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig982 1232..1272 +
1690557972.9885998-CDS-D-dudresnayi_contig982:1231..12721690557972.9885998-CDS-D-dudresnayi_contig982:1231..1272Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig982 1232..1272 +
1622930939.3732896-CDS-D-dudresnayi_contig982:1472..16601622930939.3732896-CDS-D-dudresnayi_contig982:1472..1660Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig982 1473..1660 +
1690557972.9993062-CDS-D-dudresnayi_contig982:1472..16601690557972.9993062-CDS-D-dudresnayi_contig982:1472..1660Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig982 1473..1660 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig982.28622.1

>prot_D-dudresnayi_contig982.28622.1 ID=prot_D-dudresnayi_contig982.28622.1|Name=mRNA_D-dudresnayi_contig982.28622.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=231bp
MESKNGSSGVYRHHSAKDTYNEGKSEPPSEAKQSSNGFSGAKDENCSNHA
QDKESIREIADADDEFEALKHSSTIVTPTIAPTKYARNFVAGFKILSMNM
RDAYSGKLLWTAGTWSAEDMFEREIKEEIPQEVLKCKAVAREIIFSSAEE
VRGFRLRQKVFFQGTCIEEWHFQFGFVIPGSTNTWQQTIDAAPPSEMLPA
QVLSGNVVFETSFYDGEEFLCKNSVRLFYV*
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mRNA from alignment at D-dudresnayi_contig982:419..1660+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig982.28622.1 ID=mRNA_D-dudresnayi_contig982.28622.1|Name=mRNA_D-dudresnayi_contig982.28622.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1242bp|location=Sequence derived from alignment at D-dudresnayi_contig982:419..1660+ (Desmarestia dudresnayi DdudBR16 monoicous)
CAAAGATGGAAAGTAAAAATGGATCGAGTGGGGTGTATAGACATCATTCA GCAAAAGATACATATAATGAAGGAAAAAGTGAGCCCCCGTCAGAAGCTAA ACAGAGCTCAAACGGTTTCTCCGGAGCAAAAGATGAAAATTGTTCGAATC ATGCGCAAGATAAAGAATCAATCAGGGAAATAGCAGATGCAGATGATGAA TTCGAAGCTCTTAAACATTCTTCAACAATTGTAACACCAACTATAGCACC AACAAAATATGCTCGAAATTTTGTTGCTGGATTCAAAATGTATTAATATT CTTCAATTGAAAAGCCAGTGTTTGGATATGTATTAATAATTTATTTTTAT TATTTAGATTATCTATGAATATGCGTGATGCATATTCAGGTAAATTGTTA TGGACAGCAGGAACGTGGAGTGCTGAGGACATGTTTGAACGAGAAATCAA AGGTATTCTCTAGCTTCTGTAAGCTTCTAAAGTATCTTTACTTATACTAT AAGTATATACTATATGTTATGTTTATTGTACTTCCAGAGGAGATTCCTCA AGAAGTGTTGAAGTGCAAGGCCGTGGCGAGGGAGATAATCTTCTCTTCTG CAGAAGAGGTCAGAGGCTTCAGGTACACTACAGGACTCCTTCTCTGCTCT ATTGTTATGTTGTTCTACTCTACTGTGCTTTTGTACTATAATACACGGCT GTATTGATCTGTGGTACTGCTGTATTATACTACAGTCTCCTTCTCTATAC TTATTGCTATAATATTTACCTTAATTATATCCCTTAAATCCTCTGCTTAC TGGCTGTGTGTAGACTGCGACAGAAGGTGTTCTTCCAGGGAACCTGCATA GAAGGTACTGTACGCACCTACCATATACTGATATACTGTACTTTACTGTA ATATACTGTATTGTAGTGTACTGTTATCCTGCTGTACGATATTAGTATAC CATATGCGGTACTGTAGTATACCATATGCGGTACTGTAGTGTTTCCATAA TAAGCATACATCACAGCTACTATATACTAACACACTGCATATTAACTGAT ACAGAATGGCATTTTCAATTCGGTTTTGTCATTCCTGGTTCCACCAACAC ATGGCAACAAACAATCGACGCAGCCCCACCTAGCGAAATGCTCCCGGCGC AGGTGCTATCCGGCAATGTAGTCTTTGAAACCTCTTTTTATGACGGAGAG GAATTCTTGTGCAAGAATTCTGTGCGTTTGTTTTATGTATAA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig982:419..1660+

>mRNA_D-dudresnayi_contig982.28622.1 ID=mRNA_D-dudresnayi_contig982.28622.1|Name=mRNA_D-dudresnayi_contig982.28622.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1386bp|location=Sequence derived from alignment at D-dudresnayi_contig982:419..1660+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGAAAGTAAAAATGGATCGAGTGGGGTGTATAGACATCATTCAGCAAA
AGATACATATAATGAAGGAAAAAGTGAGCCCCCGTCAGAAGCTAAACAGA
GCTCAAACGGTTTCTCCGGAGCAAAAGATGAAAATTGTTCGAATCATGCG
CAAGATAAAGAATCAATCAGGGAAATAGCAGATGCAGATGATGAATTCGA
AGCTCTTAAACATTCTTCAACAATTGTAACACCAACTATAGCACCAACAA
AATATGCTCGAAATTTTGTTGCTGGATTCAAAATATGGAAAGTAAAAATG
GATCGAGTGGGGTGTATAGACATCATTCAGCAAAAGATACATATAATGAA
GGAAAAAGTGAGCCCCCGTCAGAAGCTAAACAGAGCTCAAACGGTTTCTC
CGGAGCAAAAGATGAAAATTGTTCGAATCATGCGCAAGATAAAGAATCAA
TCAGGGAAATAGCAGATGCAGATGATGAATTCGAAGCTCTTAAACATTCT
TCAACAATTGTAACACCAACTATAGCACCAACAAAATATGCTCGAAATTT
TGTTGCTGGATTCAAAATATTATCTATGAATATGCGTGATGCATATTCAG
GTAAATTGTTATGGACAGCAGGAACGTGGAGTGCTGAGGACATGTTTGAA
CGAGAAATCAAAGATTATCTATGAATATGCGTGATGCATATTCAGGTAAA
TTGTTATGGACAGCAGGAACGTGGAGTGCTGAGGACATGTTTGAACGAGA
AATCAAAGAGGAGATTCCTCAAGAAGTGTTGAAGTGCAAGGCCGTGGCGA
GGGAGATAATCTTCTCTTCTGCAGAAGAGGTCAGAGGCTTCAGAGGAGAT
TCCTCAAGAAGTGTTGAAGTGCAAGGCCGTGGCGAGGGAGATAATCTTCT
CTTCTGCAGAAGAGGTCAGAGGCTTCAGACTGCGACAGAAGGTGTTCTTC
CAGGGAACCTGCATAGAAGACTGCGACAGAAGGTGTTCTTCCAGGGAACC
TGCATAGAAGAATGGCATTTTCAATTCGGTTTTGTCATTCCTGGTTCCAC
CAACACATGGCAACAAACAATCGACGCAGCCCCACCTAGCGAAATGCTCC
CGGCGCAGGTGCTATCCGGCAATGTAGTCTTTGAAACCTCTTTTTATGAC
GGAGAGGAATTCTTGTGCAAGAATTCTGTGCGTTTGTTTTATGTATAAAA
TGGCATTTTCAATTCGGTTTTGTCATTCCTGGTTCCACCAACACATGGCA
ACAAACAATCGACGCAGCCCCACCTAGCGAAATGCTCCCGGCGCAGGTGC
TATCCGGCAATGTAGTCTTTGAAACCTCTTTTTATGACGGAGAGGAATTC
TTGTGCAAGAATTCTGTGCGTTTGTTTTATGTATAA
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