mRNA_D-dudresnayi_contig9777.28580.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9777.28580.1
Unique NamemRNA_D-dudresnayi_contig9777.28580.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig9777.28580.1 vs. uniprot
Match: A0A7S3GSI8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GSI8_9STRA)

HSP 1 Score: 322 bits (824), Expect = 2.310e-99
Identity = 225/377 (59.68%), Postives = 255/377 (67.64%), Query Frame = 1
Query:    1 MSGFSLAALKNAVDEVRVQVYAKNDTEKKVYEALSSKNWGASSTLLNEIAAESSDYEKYQIINDIVWAAMETEGKSWKQIFKALTLVEFLIKNGTERFIEASRDKLFKIKRLQDYNYFEGTIDKGSGCREKAKQIVELLGSNDIIRSEREKARALRNKFGGIGSDSR----GGGFGXXXXXXXXXXXXYSDSYSNSGNQGRYG----------GDSYSSNDRGPSDRYSDRGGGSGGDRXXXXXXXXXX--------------DSDRPPRFSXXXXXXXXXXXXXXXXXSAYDAEEVDIKPAK-FTPKEDRGGSTATGGKLKVSIKKAPSVAAPAPVVSAAP--EVNLFGDDFDAAPT--------SASGAAADFDP 1014
            MSGFSLAA+KN +DEVRVQVYAKN+TEKK   ALSSKNWGASST+LN+IA ++ DYEK+ IIN+IVWA+++TEGKSWKQIFK+LTL+EFLIKNG+ERFIEASRDKLFKIKRLQDYN++EGT+DKGSGCREKAKQIVELL SN+IIRSEREKARALRNKFGG+GSDSR    GG   XXXXXXXXXXXX SDSY N                   DSYS          +DR G  GG    XXXXXXXX              DSD+PPR+                  SAYD +E D+   K + PK     +TATGGKLKVSI+K+    APA      P  EVNL GDDFDA  T        SA+ AAA FDP
Sbjct:    1 MSGFSLAAIKNTLDEVRVQVYAKNETEKK---ALSSKNWGASSTMLNDIANDTGDYEKFGIINEIVWASLDTEGKSWKQIFKSLTLIEFLIKNGSERFIEASRDKLFKIKRLQDYNFYEGTVDKGSGCREKAKQIVELLSSNEIIRSEREKARALRNKFGGVGSDSRSMGGGGXXXXXXXXXXXXXXXSSDSYGNQXXXXXXXXXXXXXXXXXNDSYS----------NDRHGSGGGSNSYXXXXXXXXXXXXXTGRYGGGAYDSDKPPRYGDDAPADRYDSGNAGRRSSAYDRDEPDVDDIKPYKPKSKTDSTTATGGKLKVSIRKSD---APAAXXXXXPVKEVNLIGDDFDAFETAXXXXXXXSAAPAAAAFDP 361          
BLAST of mRNA_D-dudresnayi_contig9777.28580.1 vs. uniprot
Match: A0A6U4DQX0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4DQX0_9STRA)

HSP 1 Score: 207 bits (526), Expect = 3.730e-61
Identity = 101/170 (59.41%), Postives = 129/170 (75.88%), Query Frame = 1
Query:    4 SGFSLAALKNAVDEVRVQVYAKNDTEKKVYEALSSKNWGASSTLLNEIAAESSDYEKYQIINDIVWAAMETEGKSWKQIFKALTLVEFLIKNGTERFIEASRDKLFKIKRLQDYNYFEGTIDKGSGCREKAKQIVELLGSNDIIRSEREKARALRNKFGGIGSDSRGGGF 513
            S F+L  L++AVDEVR QV  KN+TE++VYEA+S+KNWGASSTLLNEIAA+   YE Y ++  I+W ++   G+SW+QIFK L+L+E LIKNG ER +E SRD + KI+ L D+NY+EGT D+GSG REKAKQI++LL  N  IR ER  AR LR+KF GI +  R GGF
Sbjct:    3 SSFTLDRLRSAVDEVRAQVAPKNETERRVYEAISNKNWGASSTLLNEIAADVRHYEHYSMVMKIIWESLNAAGRSWRQIFKTLSLLEHLIKNGPERIVEDSRDHMHKIRTLTDFNYYEGTTDRGSGVREKAKQIMDLLSDNTAIREERANARRLRDKFVGISNSGRTGGF 172          
BLAST of mRNA_D-dudresnayi_contig9777.28580.1 vs. uniprot
Match: A0A7S1TU31_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU31_9STRA)

HSP 1 Score: 207 bits (526), Expect = 4.540e-59
Identity = 101/170 (59.41%), Postives = 129/170 (75.88%), Query Frame = 1
Query:    4 SGFSLAALKNAVDEVRVQVYAKNDTEKKVYEALSSKNWGASSTLLNEIAAESSDYEKYQIINDIVWAAMETEGKSWKQIFKALTLVEFLIKNGTERFIEASRDKLFKIKRLQDYNYFEGTIDKGSGCREKAKQIVELLGSNDIIRSEREKARALRNKFGGIGSDSRGGGF 513
            S F+L  L++AVDEVR QV  KN+TE++VYEA+S+KNWGASSTLLNEIAA+   YE Y ++  I+W ++   G+SW+QIFK L+L+E LIKNG ER +E SRD + KI+ L D+NY+EGT D+GSG REKAKQI++LL  N  IR ER  AR LR+KF GI +  R GGF
Sbjct:    3 SSFTLDRLRSAVDEVRAQVAPKNETERRVYEAISNKNWGASSTLLNEIAADVRHYEHYSMVMKIIWESLNAAGRSWRQIFKTLSLLEHLIKNGPERIVEDSRDHMHKIRTLTDFNYYEGTTDRGSGVREKAKQIMDLLSDNTAIREERANARRLRDKFVGISNSGRTGGF 172          
BLAST of mRNA_D-dudresnayi_contig9777.28580.1 vs. uniprot
Match: A0A6H5JZR7_9PHAE (ENTH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZR7_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 9.380e-55
Identity = 97/167 (58.08%), Postives = 130/167 (77.84%), Query Frame = 1
Query:   13 SLAALKNAVDEVRVQVYAKNDTEKKVYEALSSKNWGASSTLLNEIAAESSDYEKYQIINDIVWAAMETEGKSWKQIFKALTLVEFLIKNGTERFIEASRDKLFKIKRLQDYNYFEGTIDKGSGCREKAKQIVELLGSNDIIRSEREKARALRNKFGGIGSDSRGGGF 513
            SL  +KN V EVR  +  +NDTEK+VYEALS+KNWGASSTLLN+IA ++ D+EKY I+  ++W A+++  + W+++FKAL L+E LIKNG ER IE +RD L +++ L D+NY+EG IDKGSG REK+KQ++ELL  ND+IR EREK R LR+K+ G+GS   GGGF
Sbjct:   13 SLDKVKNMVGEVRDTIAPRNDTEKRVYEALSNKNWGASSTLLNDIARDTYDFEKYGIVLPLIWTALQSPSREWRKVFKALCLLEHLIKNGAERVIEDARDNLHRVRMLSDFNYYEGPIDKGSGVREKSKQVIELLKDNDMIREEREKCRKLRDKYVGLGS---GGGF 176          
BLAST of mRNA_D-dudresnayi_contig9777.28580.1 vs. uniprot
Match: A0A7S4DHG0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHG0_HETAK)

HSP 1 Score: 186 bits (472), Expect = 4.740e-53
Identity = 88/174 (50.57%), Postives = 131/174 (75.29%), Query Frame = 1
Query:    1 MSGFSLAALKNAVDEVRVQVYAKNDTEKKVYEALSSKNWGASSTLLNEIAAESSDYEKYQIINDIVWAAMETEGKSWKQIFKALTLVEFLIKNGTERFIEASRDKLFKIKRLQDYNYFEGTIDKGSGCREKAKQIVELLGSNDIIRSEREKARALRNKFGGIGSDSR--GGGFG 516
            +   +L  +KN   +V + V  KNDTEK+V+EALS++NWGASSTL+ EIA ++ DYEKY  I  ++W A+++ G++W+ +FK L+L+EFL+K+G+ER IE +RD   +++ L +++Y +G +D+G G R+KA+Q+VELL SN+ IR ER+KA+ALRNKF GI +DS   GGG G
Sbjct:    9 LKNLTLDDVKNIAQDVAINVKPKNDTEKRVHEALSNQNWGASSTLMQEIAKDTFDYEKYPQITKLIWQALDSPGRAWRSVFKGLSLLEFLVKHGSERVIEDARDHTHRLRLLLNFSYSDGGVDRGQGVRDKARQLVELLSSNETIREERQKAQALRNKFSGISNDSYSYGGGGG 182          
BLAST of mRNA_D-dudresnayi_contig9777.28580.1 vs. uniprot
Match: A0A4D9CR71_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR71_9STRA)

HSP 1 Score: 192 bits (488), Expect = 5.810e-51
Identity = 89/159 (55.97%), Postives = 124/159 (77.99%), Query Frame = 1
Query:   13 SLAALKNAVDEVRVQVYAKNDTEKKVYEALSSKNWGASSTLLNEIAAESSDYEKYQIINDIVWAAMETEGKSWKQIFKALTLVEFLIKNGTERFIEASRDKLFKIKRLQDYNYFEGTIDKGSGCREKAKQIVELLGSNDIIRSEREKARALRNKFGGIG 489
            +L +LKN VDE + Q+  + + EK+++EALS+KNWGASSTL+N+IA+++ DYEKY  +   +W+A++  G+SW+ IFKALTL++ L+KNG ER +E  RD L KI+ L D+NYFEG++D+GSG REKAK ++EL+G N  +R EREKAR LR KF GIG
Sbjct:  173 NLESLKNMVDEAKNQIVPRTEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRDHLHKIRTLADFNYFEGSLDRGSGIREKAKMLMELVGENGRVREEREKARRLREKFVGIG 331          
BLAST of mRNA_D-dudresnayi_contig9777.28580.1 vs. uniprot
Match: A0A0P1AWZ9_PLAHL (Enth domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWZ9_PLAHL)

HSP 1 Score: 179 bits (455), Expect = 1.750e-50
Identity = 86/166 (51.81%), Postives = 126/166 (75.90%), Query Frame = 1
Query:    1 MSGFSLAALKNAVDEVRVQVYAK--NDTEKKVYEALSSKNWGASSTLLNEIAAESSDYEKYQIINDIVWAAMETEGKSWKQIFKALTLVEFLIKNGTERFIEASRDKLFKIKRLQDYNYFEGTIDKGSGCREKAKQIVELLGSNDIIRSEREKARALRNKFGGIGS 492
            M  F+L  LKN +D+ +  V AK   D E+K+ EALS+KNWGASSTLLN+IA  + D+E Y +I   +W A++ EG+ W+ ++KAL+L++ LIKNGTER IE +RD +FK++ L  ++Y +G++D+G+G R+KAKQ+V++L  N++IR+EREKA  LRNK+ GIGS
Sbjct:    1 MDRFALDKLKNVMDDAKSAVKAKMGTDVERKMEEALSNKNWGASSTLLNDIAQLTYDFEAYGLIMRKIWDALDAEGRQWRTVYKALSLLDHLIKNGTERVIENARDHMFKLRHLSGFSYHDGSVDRGNGVRDKAKQLVDILNDNNVIRTEREKAGRLRNKYVGIGS 166          
BLAST of mRNA_D-dudresnayi_contig9777.28580.1 vs. uniprot
Match: W4GN78_9STRA (ENTH domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GN78_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.780e-50
Identity = 91/173 (52.60%), Postives = 125/173 (72.25%), Query Frame = 1
Query:    1 MSGFSLAALKNAVDEVRVQVYAK--NDTEKKVYEALSSKNWGASSTLLNEIAAESSDYEKYQIINDIVWAAMETEGKSWKQIFKALTLVEFLIKNGTERFIEASRDKLFKIKRLQDYNYFEGTIDKGSGCREKAKQIVELLGSNDIIRSEREKARALRNKFGGIGSDSRGGGF 513
            M    +   KNA D+ +  V +K   DTEKK+ EALS+KNWGASSTLLNEIA  + +YE Y ++   VW AM+ EG+ W+ +FKAL L++ LIKNGTER +E +RD +FK++ L D+NY++G+ DKG+G REK KQI+++L  ND IR ER+KA+ LR+K+ G+GS    GGF
Sbjct:    1 MDKLMIDKFKNAFDDAKGLVKSKMGTDTEKKLEEALSNKNWGASSTLLNEIAQLTYEYESYNLVMKKVWEAMDAEGRQWRTVFKALALLDHLIKNGTERVVENARDHMFKLRTLSDFNYYDGSADKGAGVREKVKQILDMLNDNDRIRDERDKAKRLRDKYIGVGSTGNTGGF 173          
BLAST of mRNA_D-dudresnayi_contig9777.28580.1 vs. uniprot
Match: A0A8K1FFS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFS9_PYTOL)

HSP 1 Score: 190 bits (483), Expect = 3.290e-50
Identity = 96/174 (55.17%), Postives = 129/174 (74.14%), Query Frame = 1
Query:    1 MSGFSLAALKNAVDEVRVQVYAK--NDTEKKVYEALSSKNWGASSTLLNEIAAESSDYEKYQIINDIVWAAMETEGKSWKQIFKALTLVEFLIKNGTERFIEASRDKLFKIKRLQDYNYFEGTIDKGSGCREKAKQIVELLGSNDIIRSEREKARALRNKFGGIGSDSRGGGFG 516
            M  F+L  LKN VDE +  V AK   D EKK+ EALS+KNWGASSTLLNEIA  + DYE Y +I   +W AM++  + W+ +FKALTL++ LIKNGTER +E +RD +FK++ L D++Y +G+ DKG+G REK KQI+++L +ND+IR EREK+R +R+K+ GIGS   GGG G
Sbjct:    1 MDKFTLDRLKNVVDEAKNAVKAKLGTDVEKKLEEALSNKNWGASSTLLNEIAQLTYDYESYNVIMTKIWEAMDSHARQWRTVFKALTLLDHLIKNGTERVVENARDHMFKLRALSDFSYHDGSADKGAGVREKTKQILDMLNNNDLIREEREKSRKMRDKYVGIGSV--GGGMG 172          
BLAST of mRNA_D-dudresnayi_contig9777.28580.1 vs. uniprot
Match: W2RIG8_PHYPN (ENTH domain-containing protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2RIG8_PHYPN)

HSP 1 Score: 185 bits (470), Expect = 1.260e-49
Identity = 90/166 (54.22%), Postives = 126/166 (75.90%), Query Frame = 1
Query:    1 MSGFSLAALKNAVDEVRVQVYAK--NDTEKKVYEALSSKNWGASSTLLNEIAAESSDYEKYQIINDIVWAAMETEGKSWKQIFKALTLVEFLIKNGTERFIEASRDKLFKIKRLQDYNYFEGTIDKGSGCREKAKQIVELLGSNDIIRSEREKARALRNKFGGIGS 492
            M  F+L  LKN +D+ +  V AK   D E+K+ EALS+KNWGASSTLLNEIA  + DYE Y +I   +W A++ EG+ W+ ++KAL+L+E LIKNGTER IE +RD +FK++ L  ++Y +G++D+G+G R+KAKQ+V++L  ND+IR+EREKA  LRNK+ GIGS
Sbjct:    1 MDRFALDKLKNVMDDAKSAVKAKMGTDVERKMEEALSNKNWGASSTLLNEIAQLTYDYEAYGVIMRKIWEALDAEGRQWRAVYKALSLLEHLIKNGTERVIENARDHMFKLRHLSGFSYHDGSVDRGNGVRDKAKQLVDMLNDNDMIRTEREKAGRLRNKYVGIGS 166          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9777.28580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3GSI8_9STRA2.310e-9959.68Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6U4DQX0_9STRA3.730e-6159.41Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S1TU31_9STRA4.540e-5959.41Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A6H5JZR7_9PHAE9.380e-5558.08ENTH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S4DHG0_HETAK4.740e-5350.57Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9CR71_9STRA5.810e-5155.97Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A0P1AWZ9_PLAHL1.750e-5051.81Enth domain-containing protein n=1 Tax=Plasmopara ... [more]
W4GN78_9STRA1.780e-5052.60ENTH domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A8K1FFS9_PYTOL3.290e-5055.17Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W2RIG8_PHYPN1.260e-4954.22ENTH domain-containing protein n=7 Tax=Phytophthor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9777contigD-dudresnayi_contig9777:1783..3348 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score191.4
Seed ortholog evalue9e-46
Seed eggNOG ortholog65071.PYU1_T005801
Preferred nameENT3
KEGG koko:K12471
KEGG Pathwayko04144,map04144
GOsGO:0000147,GO:0002020,GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005546,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005773,GO:0005774,GO:0005794,GO:0005856,GO:0005884,GO:0005886,GO:0005938,GO:0006605,GO:0006623,GO:0006810,GO:0006886,GO:0006892,GO:0006895,GO:0006897,GO:0006996,GO:0007010,GO:0007015,GO:0007034,GO:0008104,GO:0008150,GO:0008289,GO:0009579,GO:0009987,GO:0012505,GO:0012506,GO:0015031,GO:0015629,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0016197,GO:0016482,GO:0019899,GO:0022607,GO:0030029,GO:0030036,GO:0030117,GO:0030118,GO:0030120,GO:0030125,GO:0030135,GO:0030136,GO:0030276,GO:0030479,GO:0030659,GO:0030662,GO:0030665,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0031090,GO:0031410,GO:0031982,GO:0032266,GO:0032509,GO:0032511,GO:0032991,GO:0033036,GO:0033365,GO:0034498,GO:0034613,GO:0035091,GO:0042147,GO:0042886,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044396,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0045184,GO:0045324,GO:0046907,GO:0048193,GO:0048475,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061645,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0080025,GO:0097435,GO:0097708,GO:0098588,GO:0098657,GO:0098796,GO:0098805,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:1901981,GO:1902936
EggNOG free text desc.Source PGD
EggNOG OGs1MGDE@121069,KOG2056@1,KOG2056@2759
COG Functional cat.F
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categoryother localisation
Exons4
Model size1362
Cds size1362
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9777.28580.1prot_D-dudresnayi_contig9777.28580.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9777 1783..3348 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930934.404696-CDS-D-dudresnayi_contig9777:1782..28981622930934.404696-CDS-D-dudresnayi_contig9777:1782..2898Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9777 1783..2898 -
1690557970.9816656-CDS-D-dudresnayi_contig9777:1782..28981690557970.9816656-CDS-D-dudresnayi_contig9777:1782..2898Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9777 1783..2898 -
1622930934.4175432-CDS-D-dudresnayi_contig9777:2968..30471622930934.4175432-CDS-D-dudresnayi_contig9777:2968..3047Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9777 2969..3047 -
1690557970.9954834-CDS-D-dudresnayi_contig9777:2968..30471690557970.9954834-CDS-D-dudresnayi_contig9777:2968..3047Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9777 2969..3047 -
1622930934.430173-CDS-D-dudresnayi_contig9777:3115..31951622930934.430173-CDS-D-dudresnayi_contig9777:3115..3195Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9777 3116..3195 -
1690557971.0063014-CDS-D-dudresnayi_contig9777:3115..31951690557971.0063014-CDS-D-dudresnayi_contig9777:3115..3195Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9777 3116..3195 -
1622930934.4467063-CDS-D-dudresnayi_contig9777:3261..33481622930934.4467063-CDS-D-dudresnayi_contig9777:3261..3348Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9777 3262..3348 -
1690557971.0201452-CDS-D-dudresnayi_contig9777:3261..33481690557971.0201452-CDS-D-dudresnayi_contig9777:3261..3348Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9777 3262..3348 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9777.28580.1

>prot_D-dudresnayi_contig9777.28580.1 ID=prot_D-dudresnayi_contig9777.28580.1|Name=mRNA_D-dudresnayi_contig9777.28580.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=454bp
MSGFSLAALKNAVDEVRVQVYAKNDTEKKVYEALSSKNWGASSTLLNEIA
AESSDYEKYQIINDIVWAAMETEGKSWKQIFKALTLVEFLIKNGTERFIE
ASRDKLFKIKRLQDYNYFEGTIDKGSGCREKAKQIVELLGSNDIIRSERE
KARALRNKFGGIGSDSRGGGFGGGGYSGSGGGNSYSDSYSNSGNQGRYGG
DSYSSNDRGPSDRYSDRGGGSGGDRNTGRYGGGAYDSDRPPRFSDDGPSD
QHDNNGGGRRGSAYDAEEVDIKPAKFTPKEDRGGSTATGGKLKVSIKKAP
SVAAPAPVVSAAPEVNLFGDDFDAAPTSASGAAADFDPFGSAPTAPATAA
ADFDPFGSSAPAPGPADLLDAFTTPAAPQQTAPAQAAFDPFNQPAYGQQP
VAYGAPQQQQQYGQQQMQQQQYGQPPQQQFNQQPQQYGQFQGFTSAPQQA
APPV
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mRNA from alignment at D-dudresnayi_contig9777:1783..3348-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9777.28580.1 ID=mRNA_D-dudresnayi_contig9777.28580.1|Name=mRNA_D-dudresnayi_contig9777.28580.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1566bp|location=Sequence derived from alignment at D-dudresnayi_contig9777:1783..3348- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTCTGGATTTAGTTTGGCTGCATTAAAAAACGCTGTTGATGAGGTTAG AGTACAGGTTTATGCGAAAAATGATACTGAGAAAAAGGTTAGAATACATT TATTCTTTTCTATATACATTTTAATATAATGATCTTATATGCAATGATTT TAGGTGTATGAAGCTTTGTCTTCCAAGAATTGGGGAGCTTCTTCAACATT ATTGAACGAGATTGCTGCCGAAAGCAGCGACTAGTAAGCAAAAAGTTATT AATTTCATATAATAATGACTGTGATTTTAAAATATGTTTTGTTTTTTACA GTGAAAAGTATCAGATAATTAATGATATTGTCTGGGCAGCCATGGAAACT GAGGGAAAAAGCTGGAAGCAAATCTTTAAGGTAATTTTAATAACAAATTT GTTATGTAAATTGATAACACTAATATTTGTTTATATGTTTTTTCTAATAG GCTCTTACTCTTGTTGAGTTTTTAATTAAGAATGGTACTGAGCGTTTCAT TGAAGCGTCACGTGATAAACTATTTAAGATCAAGCGCTTGCAAGACTACA ACTACTTCGAAGGCACAATTGACAAGGGTTCAGGATGCAGAGAGAAAGCA AAACAAATTGTGGAGTTATTAGGTAGTAATGACATTATTCGCTCAGAACG TGAGAAAGCTCGTGCTTTGAGAAATAAATTTGGTGGTATTGGATCTGACA GTCGCGGCGGCGGATTCGGCGGGGGTGGATACAGTGGTAGTGGTGGAGGA AACAGCTACTCTGACAGCTATAGCAACTCAGGCAACCAAGGCCGATATGG TGGTGATAGCTACTCTTCGAATGACAGAGGGCCAAGTGATCGCTACAGCG ATCGCGGTGGTGGTAGCGGCGGGGACCGCAATACTGGGCGCTACGGTGGC GGGGCTTACGACTCCGATCGCCCTCCTCGCTTCAGTGATGACGGACCTTC TGACCAGCATGACAACAATGGTGGAGGTCGACGCGGTTCTGCTTACGATG CTGAGGAAGTTGACATCAAGCCTGCAAAGTTTACTCCTAAGGAGGACCGC GGGGGAAGCACTGCTACTGGTGGTAAGCTGAAAGTCAGCATCAAAAAGGC TCCATCTGTCGCTGCACCTGCCCCTGTTGTTAGTGCTGCGCCAGAGGTGA ATCTGTTTGGTGACGATTTCGATGCTGCCCCTACTTCTGCCTCTGGAGCC GCTGCTGACTTTGACCCATTTGGATCTGCTCCCACTGCTCCTGCCACCGC TGCTGCTGATTTTGATCCTTTCGGTTCTTCTGCTCCTGCTCCTGGCCCTG CTGATCTATTGGATGCCTTCACCACCCCCGCCGCTCCTCAGCAAACTGCC CCTGCACAGGCTGCGTTCGATCCCTTCAACCAACCTGCCTATGGACAGCA GCCTGTTGCCTATGGTGCTCCTCAACAGCAGCAGCAGTATGGACAACAGC AGATGCAGCAGCAACAGTATGGTCAGCCACCACAACAACAATTTAACCAG CAGCCTCAGCAATACGGACAGTTCCAGGGCTTCACTTCTGCTCCCCAACA AGCCGCTCCTCCTGTG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9777:1783..3348-

>mRNA_D-dudresnayi_contig9777.28580.1 ID=mRNA_D-dudresnayi_contig9777.28580.1|Name=mRNA_D-dudresnayi_contig9777.28580.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2724bp|location=Sequence derived from alignment at D-dudresnayi_contig9777:1783..3348- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTCTGGATTTAGTTTGGCTGCATTAAAAAACGCTGTTGATGAGGTTAG
AGTACAGGTTTATGCGAAAAATGATACTGAGAAAAAGATGTCTGGATTTA
GTTTGGCTGCATTAAAAAACGCTGTTGATGAGGTTAGAGTACAGGTTTAT
GCGAAAAATGATACTGAGAAAAAGGTGTATGAAGCTTTGTCTTCCAAGAA
TTGGGGAGCTTCTTCAACATTATTGAACGAGATTGCTGCCGAAAGCAGCG
ACTAGTGTATGAAGCTTTGTCTTCCAAGAATTGGGGAGCTTCTTCAACAT
TATTGAACGAGATTGCTGCCGAAAGCAGCGACTATGAAAAGTATCAGATA
ATTAATGATATTGTCTGGGCAGCCATGGAAACTGAGGGAAAAAGCTGGAA
GCAAATCTTTAAGTGAAAAGTATCAGATAATTAATGATATTGTCTGGGCA
GCCATGGAAACTGAGGGAAAAAGCTGGAAGCAAATCTTTAAGGCTCTTAC
TCTTGTTGAGTTTTTAATTAAGAATGGTACTGAGCGTTTCATTGAAGCGT
CACGTGATAAACTATTTAAGATCAAGCGCTTGCAAGACTACAACTACTTC
GAAGGCACAATTGACAAGGGTTCAGGATGCAGAGAGAAAGCAAAACAAAT
TGTGGAGTTATTAGGTAGTAATGACATTATTCGCTCAGAACGTGAGAAAG
CTCGTGCTTTGAGAAATAAATTTGGTGGTATTGGATCTGACAGTCGCGGC
GGCGGATTCGGCGGGGGTGGATACAGTGGTAGTGGTGGAGGAAACAGCTA
CTCTGACAGCTATAGCAACTCAGGCAACCAAGGCCGATATGGTGGTGATA
GCTACTCTTCGAATGACAGAGGGCCAAGTGATCGCTACAGCGATCGCGGT
GGTGGTAGCGGCGGGGACCGCAATACTGGGCGCTACGGTGGCGGGGCTTA
CGACTCCGATCGCCCTCCTCGCTTCAGTGATGACGGACCTTCTGACCAGC
ATGACAACAATGGTGGAGGTCGACGCGGTTCTGCTTACGATGCTGAGGAA
GTTGACATCAAGCCTGCAAAGTTTACTCCTAAGGAGGACCGCGGGGGAAG
CACTGCTACTGGTGGTAAGCTGAAAGTCAGCATCAAAAAGGCTCCATCTG
TCGCTGCACCTGCCCCTGTTGTTAGTGCTGCGCCAGAGGTGAATCTGTTT
GGTGACGATTTCGATGCTGCCCCTACTTCTGCCTCTGGAGCCGCTGCTGA
CTTTGACCCATTTGGATCTGCTCCCACTGCTCCTGCCACCGCTGCTGCTG
ATTTTGATCCTTTCGGTTCTTCTGCTCCTGCTCCTGGCCCTGCTGATCTA
TTGGATGCCTTCACCACCCCCGCCGCTCCTCAGCAAACTGCCCCTGCACA
GGCTGCGTTCGATCCCTTCAACCAACCTGCCTATGGACAGCAGCCTGTTG
CCTATGGTGCTCCTCAACAGCAGCAGCAGTATGGACAACAGCAGATGCAG
CAGCAACAGTATGGTCAGCCACCACAACAACAATTTAACCAGCAGCCTCA
GCAATACGGACAGTTCCAGGGCTTCACTTCTGCTCCCCAACAAGCCGCTC
CTCCTGTGGCTCTTACTCTTGTTGAGTTTTTAATTAAGAATGGTACTGAG
CGTTTCATTGAAGCGTCACGTGATAAACTATTTAAGATCAAGCGCTTGCA
AGACTACAACTACTTCGAAGGCACAATTGACAAGGGTTCAGGATGCAGAG
AGAAAGCAAAACAAATTGTGGAGTTATTAGGTAGTAATGACATTATTCGC
TCAGAACGTGAGAAAGCTCGTGCTTTGAGAAATAAATTTGGTGGTATTGG
ATCTGACAGTCGCGGCGGCGGATTCGGCGGGGGTGGATACAGTGGTAGTG
GTGGAGGAAACAGCTACTCTGACAGCTATAGCAACTCAGGCAACCAAGGC
CGATATGGTGGTGATAGCTACTCTTCGAATGACAGAGGGCCAAGTGATCG
CTACAGCGATCGCGGTGGTGGTAGCGGCGGGGACCGCAATACTGGGCGCT
ACGGTGGCGGGGCTTACGACTCCGATCGCCCTCCTCGCTTCAGTGATGAC
GGACCTTCTGACCAGCATGACAACAATGGTGGAGGTCGACGCGGTTCTGC
TTACGATGCTGAGGAAGTTGACATCAAGCCTGCAAAGTTTACTCCTAAGG
AGGACCGCGGGGGAAGCACTGCTACTGGTGGTAAGCTGAAAGTCAGCATC
AAAAAGGCTCCATCTGTCGCTGCACCTGCCCCTGTTGTTAGTGCTGCGCC
AGAGGTGAATCTGTTTGGTGACGATTTCGATGCTGCCCCTACTTCTGCCT
CTGGAGCCGCTGCTGACTTTGACCCATTTGGATCTGCTCCCACTGCTCCT
GCCACCGCTGCTGCTGATTTTGATCCTTTCGGTTCTTCTGCTCCTGCTCC
TGGCCCTGCTGATCTATTGGATGCCTTCACCACCCCCGCCGCTCCTCAGC
AAACTGCCCCTGCACAGGCTGCGTTCGATCCCTTCAACCAACCTGCCTAT
GGACAGCAGCCTGTTGCCTATGGTGCTCCTCAACAGCAGCAGCAGTATGG
ACAACAGCAGATGCAGCAGCAACAGTATGGTCAGCCACCACAACAACAAT
TTAACCAGCAGCCTCAGCAATACGGACAGTTCCAGGGCTTCACTTCTGCT
CCCCAACAAGCCGCTCCTCCTGTG
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