mRNA_D-dudresnayi_contig9776.28577.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9776.28577.1
Unique NamemRNA_D-dudresnayi_contig9776.28577.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig9776.28577.1 vs. uniprot
Match: A0A482SPS1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SPS1_9ARCH)

HSP 1 Score: 139 bits (350), Expect = 4.300e-39
Identity = 62/111 (55.86%), Postives = 74/111 (66.67%), Query Frame = 1 
Query:  196 VFNQDGPCWWCKLVKSVGYDMCLNAGTVAWYRHRISEQVLGAWWDASMDPYETNPIKR---------------------RFRLKWPWEQDRQMAVYNRSSTLIQVASQPHR 465
            +FNQDGPC WC L+  VGY MCLNAGTV WYRH+ S ++L  WW+++MD Y+ NPIKR                     RFR+KWPWEQDRQMA+YNRS   IQ+ASQP R
Sbjct:    1 MFNQDGPCMWCNLIVKVGYHMCLNAGTVVWYRHQKSRELLWQWWNSTMDSYDANPIKRYCAYMFAFCIAMPKLTLRLPRRFRIKWPWEQDRQMALYNRSEEFIQIASQPDR 111
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BLAST of mRNA_D-dudresnayi_contig9776.28577.1 vs. uniprot
Match: A0A482SUE1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUE1_9ARCH)

HSP 1 Score: 90.1 bits (222), Expect = 5.930e-19
Identity = 40/110 (36.36%), Postives = 66/110 (60.00%), Query Frame = 1 
Query:    1 GETLATPWCKVKAMNQVMKDFPEIRFFIYMDSDAVLDKQFLETPLTTIVGTMQSKLDWDPDQKPVVFNQDGPCWWCKLVKSVGYDMCLNAGTVAWYRHRISEQVLGAWWD 330
            G  L+  WCKVKAM +V K   + +  I++DSDA++        ++ ++  + S   W+  + PV FNQDGP + C+    +GY++CLN+GTV W + ++S  +L  WW+
Sbjct:   61 GIELSASWCKVKAMLEVSKTQKQ-KVVIFLDSDAIITTNH---SMSAVLEYVSSFTGWNVSEHPVAFNQDGPGYACRHALKIGYNVCLNSGTVIWVKSKLSTTILAQWWN 166
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BLAST of mRNA_D-dudresnayi_contig9776.28577.1 vs. uniprot
Match: A0A482SKT7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SKT7_9ARCH)

HSP 1 Score: 72.8 bits (177), Expect = 3.460e-13
Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 1 
Query:    4 ETLATPWCKVKAMNQVMKDFPEIRFFIYMDSDAVLDKQFLETPLTTIVGTMQSKLDWDPDQKPVVFNQDGPCWWCKLVKSVGYDMCLN 267
            E LA  WCKVKAM   M D+P ++ F+YMDSDAV+D+QF +  L  ++G MQ +L W      VV  Q    W+  ++ S  Y   ++
Sbjct:   85 EPLADAWCKVKAMINAMDDYPSVQVFVYMDSDAVIDRQFSKLALNDLLGIMQDRLRW----YEVVIGQIIVSWFIFIIFSYVYPCSIS 168
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9776.28577.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A482SPS1_9ARCH4.300e-3955.86Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A482SUE1_9ARCH5.930e-1936.36Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A482SKT7_9ARCH3.460e-1340.91Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9776contigD-dudresnayi_contig9776:1284..1936 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score76.3
Seed ortholog evalue1.4e-11
Seed eggNOG ortholog44056.XP_009042652.1
KEGG koko:K12376
EggNOG free text desc.sulfuric ester hydrolase activity
EggNOG OGsCOG3119@1,KOG3731@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Exons3
Model size468
Cds size465
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9776.28577.1prot_D-dudresnayi_contig9776.28577.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9776 1285..1936 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930934.2164426-CDS-D-dudresnayi_contig9776:1284..13811622930934.2164426-CDS-D-dudresnayi_contig9776:1284..1381Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9776 1285..1381 -
1690557970.9118059-CDS-D-dudresnayi_contig9776:1284..13811690557970.9118059-CDS-D-dudresnayi_contig9776:1284..1381Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9776 1285..1381 -
1622930934.2325356-CDS-D-dudresnayi_contig9776:1494..15911622930934.2325356-CDS-D-dudresnayi_contig9776:1494..1591Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9776 1495..1591 -
1690557970.9226959-CDS-D-dudresnayi_contig9776:1494..15911690557970.9226959-CDS-D-dudresnayi_contig9776:1494..1591Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9776 1495..1591 -
1622930934.2663045-CDS-D-dudresnayi_contig9776:1665..19361622930934.2663045-CDS-D-dudresnayi_contig9776:1665..1936Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9776 1666..1936 -
1690557970.9320836-CDS-D-dudresnayi_contig9776:1665..19361690557970.9320836-CDS-D-dudresnayi_contig9776:1665..1936Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9776 1666..1936 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9776.28577.1

>prot_D-dudresnayi_contig9776.28577.1 ID=prot_D-dudresnayi_contig9776.28577.1|Name=mRNA_D-dudresnayi_contig9776.28577.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=155bp
GETLATPWCKVKAMNQVMKDFPEIRFFIYMDSDAVLDKQFLETPLTTIVG
TMQSKLDWDPDQKPVVFNQDGPCWWCKLVKSVGYDMCLNAGTVAWYRHRI
SEQVLGAWWDASMDPYETNPIKRRFRLKWPWEQDRQMAVYNRSSTLIQVA
SQPHR
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mRNA from alignment at D-dudresnayi_contig9776:1284..1936-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9776.28577.1 ID=mRNA_D-dudresnayi_contig9776.28577.1|Name=mRNA_D-dudresnayi_contig9776.28577.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=653bp|location=Sequence derived from alignment at D-dudresnayi_contig9776:1284..1936- (Desmarestia dudresnayi DdudBR16 monoicous)
GGTGAAACATTGGCTACTCCTTGGTGCAAAGTGAAGGCCATGAATCAAGT
CATGAAGGACTTTCCAGAGATTCGGTTCTTTATATATATGGATTCAGATG
CAGTTTTAGATAAGCAGTTTTTAGAAACCCCATTGACGACAATAGTAGGC
ACAATGCAAAGTAAGCTAGACTGGGATCCTGACCAGAAACCCGTGGTCTT
CAACCAGGATGGTCCCTGCTGGTGGTGCAAACTCGTCAAGAGTGTGGGTT
ATGATATGTGTCTCAATGCAGGTAGGATAGTAACTGAGTGAATATTGCTT
ATTTGGACTTAATCATTGTATTTATAATCTGTTATCTTATTATAGGGACA
GTTGCATGGTACCGACACAGGATTAGCGAACAAGTGCTGGGGGCCTGGTG
GGACGCATCTATGGACCCTTACGAAACCAACCCCATTAAAAGGTATGTTG
CTACCTGCATATTCTTATCATAGTCTATAGATAGAATCATAGTTTGACTT
GCTCTTGTTTATCATATGCCATCCGTTCACCATACCGATACTGCTATACG
AATAGGAGATTTCGCTTGAAATGGCCGTGGGAGCAGGACCGGCAGATGGC
AGTGTATAACCGCTCTTCCACGCTAATCCAGGTAGCTTCTCAGCCGCACC
GGC
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9776:1284..1936-

>mRNA_D-dudresnayi_contig9776.28577.1 ID=mRNA_D-dudresnayi_contig9776.28577.1|Name=mRNA_D-dudresnayi_contig9776.28577.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=930bp|location=Sequence derived from alignment at D-dudresnayi_contig9776:1284..1936- (Desmarestia dudresnayi DdudBR16 monoicous)
GGTGAAACATTGGCTACTCCTTGGTGCAAAGTGAAGGCCATGAATCAAGT
CATGAAGGACTTTCCAGAGATTCGGTTCTTTATATATATGGATTCAGATG
CAGTTTTAGATAAGCAGTTTTTAGAAACCCCATTGACGACAATAGTAGGC
ACAATGCAAAGTAAGCTAGACTGGGATCCTGACCAGAAACCCGTGGTCTT
CAACCAGGATGGTCCCTGCTGGTGGTGCAAACTCGTCAAGAGTGTGGGTT
ATGATATGTGTCTCAATGCAGGGTGAAACATTGGCTACTCCTTGGTGCAA
AGTGAAGGCCATGAATCAAGTCATGAAGGACTTTCCAGAGATTCGGTTCT
TTATATATATGGATTCAGATGCAGTTTTAGATAAGCAGTTTTTAGAAACC
CCATTGACGACAATAGTAGGCACAATGCAAAGTAAGCTAGACTGGGATCC
TGACCAGAAACCCGTGGTCTTCAACCAGGATGGTCCCTGCTGGTGGTGCA
AACTCGTCAAGAGTGTGGGTTATGATATGTGTCTCAATGCAGGGACAGTT
GCATGGTACCGACACAGGATTAGCGAACAAGTGCTGGGGGCCTGGTGGGA
CGCATCTATGGACCCTTACGAAACCAACCCCATTAAAAGGGACAGTTGCA
TGGTACCGACACAGGATTAGCGAACAAGTGCTGGGGGCCTGGTGGGACGC
ATCTATGGACCCTTACGAAACCAACCCCATTAAAAGGAGATTTCGCTTGA
AATGGCCGTGGGAGCAGGACCGGCAGATGGCAGTGTATAACCGCTCTTCC
ACGCTAATCCAGGTAGCTTCTCAGCCGCACCGGGAGATTTCGCTTGAAAT
GGCCGTGGGAGCAGGACCGGCAGATGGCAGTGTATAACCGCTCTTCCACG
CTAATCCAGGTAGCTTCTCAGCCGCACCGG
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