mRNA_D-dudresnayi_contig975.28542.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig975.28542.1 vs. uniprot
Match: A0A6H5KKD9_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKD9_9PHAE) HSP 1 Score: 226 bits (575), Expect = 2.670e-65 Identity = 114/145 (78.62%), Postives = 125/145 (86.21%), Query Frame = 1 Query: 1 GLVCGLVAFNLSLAGILAACGAGAKSSQEALASGCLVVLFSALLSGFLVAKDELPAGWGVLAWLSPMGRGFEALVANEFSPYGAIFRLSTKIGTVT-AYTNPMTGDEVLRCFGFDGGRYFVDLAILAGVGVCGLVLAFVLLKRSR 432 GL GLVAFNLSLAG+LAACGAGAKSSQEALA+GCLVVLFSALLSGFLV+KD+LPA WG LAWLSP+GRGFE+LVANEFSPYGA+FRLSTKIG+ YT+PMTGD++LRCFGF GR DL ILA VG GL LA V LKRSR Sbjct: 1925 GLAGGLVAFNLSLAGVLAACGAGAKSSQEALATGCLVVLFSALLSGFLVSKDDLPAAWGALAWLSPIGRGFESLVANEFSPYGAVFRLSTKIGSAPIVYTDPMTGDQILRCFGFSSGRTLTDLGILAAVGGGGLALALVFLKRSR 2069
BLAST of mRNA_D-dudresnayi_contig975.28542.1 vs. uniprot
Match: A0A6H5L0D0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0D0_9PHAE) HSP 1 Score: 186 bits (472), Expect = 2.570e-55 Identity = 89/143 (62.24%), Postives = 111/143 (77.62%), Query Frame = 1 Query: 1 GLVCGLVAFNLSLAGILAACGAGAKSSQEALASGCLVVLFSALLSGFLVAKDELPAGWGVLAWLSPMGRGFEALVANEFSPYGAIFRLSTKIGTVTAYTNPMTGDEVLRCFGFDGGRYFVDLAILAGVGVCGLVLAFVLLKRS 429 GL GLV FN+++A +LAACGAGA+S QEALA GCL VLFSALLSGFLVA+D+LP WG L W SP+ GFEAL+ NEFS YGA+F L+T I VTA P+TGD +L CFGF+ GR+ +D+ +LA +G GL+LA+ LLKR+ Sbjct: 191 GLCAGLVVFNVAVAAVLAACGAGARSPQEALAMGCLFVLFSALLSGFLVARDDLPGVWGGLLWASPIAHGFEALLINEFSEYGALFTLTTVISGVTASVGPLTGDSILSCFGFENGRFSMDMGLLAAIGGAGLLLAYALLKRA 333
BLAST of mRNA_D-dudresnayi_contig975.28542.1 vs. uniprot
Match: D8LNV5_ECTSI (ATP-binding cassette superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV5_ECTSI) HSP 1 Score: 156 bits (394), Expect = 5.940e-41 Identity = 77/139 (55.40%), Postives = 99/139 (71.22%), Query Frame = 1 Query: 13 GLVAFNLSLAGILAACGAGAKSSQEALASGCLVVLFSALLSGFLVAKDELPAGWGVLAWLSPMGRGFEALVANEFSPYGAIFRLSTKIGTVTAYTNPMTGDEVLRCFGFDGGRYFVDLAILAGVGVCGLVLAFVLLKRS 429 GLV FN+++A +LAACGAGA+S QEALA GCL VLFSALLSGFLVA+D+LP WG L W SP+ G YGA+F L+T I VTA P++GD +L CFGF+ GR+ +D+ +L +G GL+LA+ LLKR+ Sbjct: 1854 GLVVFNVAVAAVLAACGAGARSPQEALAMGCLFVLFSALLSGFLVARDDLPGVWGGLLWASPIAHG----------EYGALFTLTTVISGVTASVGPLSGDNILSCFGFENGRFSLDMGLLVAIGGAGLLLAYALLKRA 1982
BLAST of mRNA_D-dudresnayi_contig975.28542.1 vs. uniprot
Match: A0A835W233_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835W233_9CHLO) HSP 1 Score: 71.6 bits (174), Expect = 2.040e-11 Identity = 47/135 (34.81%), Postives = 69/135 (51.11%), Query Frame = 1 Query: 16 LVAFNLSLAGILAACGAGAKSSQEALASGCLVVLFSALLSGFLVAKDELPAGWGVLAWLSPMGRGFEALVANEFSPYGAIFRLSTKIGTVTAYTNPMTGDEVLRCFGFDGGRYFVDLAILA--GVGVCGLVLAFV 414 LV+ N++ A + A GA A S+ A G L ++ L GFL+ KD +PA ++ S +EAL NEF + F + I T ++GD VL+ FGFD +++DL +LA G CGL F+ Sbjct: 999 LVSTNITAATMCQAIGAAAPSNAVANLVGSLTLMLLLLFGGFLLNKDAVPAYCAWVSRASFFNYAYEALAINEFHHFPLDFTFTAPINTSALPPLRISGDGVLKEFGFDVDLFYLDLTMLAVLGAACCGLTYFFL 1133
BLAST of mRNA_D-dudresnayi_contig975.28542.1 vs. uniprot
Match: A0A835XJI5_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XJI5_9CHLO) HSP 1 Score: 69.3 bits (168), Expect = 1.290e-10 Identity = 46/138 (33.33%), Postives = 68/138 (49.28%), Query Frame = 1 Query: 16 LVAFNLSLAGILAACGAGAKSSQEALASGCLVVLFSALLSGFLVAKDELPAGWGVLAWLSPMGRGFEALVANEFSPYGAIFRLSTKIGTVTAYTNPMTGDEVLRCFGFDGGRYFVDLAILAGVGVCGLVLAFVLLKRS 429 LV+ N++ A + A GAG+ S+ A G L ++ L GFL+ KD +P+ L S +EAL NEF + F + I T ++GD VL+ FGFD R++ D A L +G ++LL S Sbjct: 1041 LVSTNITAATLCMAVGAGSPSNAIANLVGSLGLMLLLLFGGFLLNKDAVPSYCSWLEAASFFNYAYEALAVNEFHHFPLDFTFTAPINTSVLPPLRISGDGVLKEFGFDVDRFYADYAALLALGAAFCGATYLLLYFS 1178
BLAST of mRNA_D-dudresnayi_contig975.28542.1 vs. uniprot
Match: D8TRH3_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TRH3_VOLCA) HSP 1 Score: 67.4 bits (163), Expect = 5.990e-10 Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 1 Query: 16 LVAFNLSLAGILAACGAGAKSSQEALASGCLVVLFSALLSGFLVAKDELPAGWGVLAWLSPMGRGFEALVANEFSPYGAIFRLSTKIGTVTAYTNPMTGDEVLRCFGFDGGRYFVDLAILAGVGVCGLVLAFVLLKRS 429 LV+ N++ A + A GA A S+ A G L ++ L GFL+ KD +P+ ++ S +EAL NEF + F + I T ++GD VL+ FGFD +++D+ +L +G L ++LL S Sbjct: 997 LVSSNITAATMCMAIGAAAPSNSVANLVGSLTLMLLLLFGGFLLNKDSVPSYCAWISKASFFNYAYEALAINEFHRFPRDFTFTAPIKTSALPPLRISGDGVLKEFGFDVDLFYLDVIMLGLLGAVCCGLTYILLYFS 1134
BLAST of mRNA_D-dudresnayi_contig975.28542.1 vs. uniprot
Match: A0A250XNY5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XNY5_9CHLO) HSP 1 Score: 67.0 bits (162), Expect = 8.100e-10 Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 1 Query: 16 LVAFNLSLAGILAACGAGAKSSQEALASGCLVVLFSALLSGFLVAKDELPAGWGVLAWLSPMGRGFEALVANEFSPYGAIFRLSTKIGTVTAYTNPMTGDEVLRCFGFDGGRYFVD--LAILAGVGVCGLVLAFVLLKR 426 LV N++ A + A GA A S+ A +G L ++ L GFL+ K+++P ++ LS +EAL NEF + A F + I + +TGD VL+ FGF+ + D L ++ + CGL A+ LL R Sbjct: 1041 LVGANVAAAAMCMAIGAAAPSNSVANMAGSLTLMLLLLFGGFLLNKEKVPVYSRWISSLSFFNYAYEALAVNEFHGFPADFSFTAPIDSSALPPLRITGDGVLKEFGFEQDAFLSDEVLLVILALTFCGL--AYYLLNR 1177
BLAST of mRNA_D-dudresnayi_contig975.28542.1 vs. uniprot
Match: A0A8J4AKR2_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AKR2_9CHLO) HSP 1 Score: 64.3 bits (155), Expect = 6.980e-9 Identity = 50/163 (30.67%), Postives = 77/163 (47.24%), Query Frame = 1 Query: 16 LVAFNLSLAGILAACGAGAKSSQEALASGCLVVLFSALLSGFLVAKDELPAGWGVLAWLSPMGRGFEALVANEFSPYGAIFRLSTKIGTVTAYTNPMTGDEVLRCFGFDGGRYFVDLAILAGVGVCGLVLAFVLLKRSR**RRTWFSFWRGVFCVCGVLLKGG 504 LV+ N++ A + A GA A S+ A G L ++ L GFL+ K +P ++ +S +EAL NEF + F + I T +TG+ VL+ FGF+ +++D+ +L +G L +VLL S F G V VLL+ G Sbjct: 1038 LVSSNITAATMCMAIGAAAPSNPIANLVGSLTLMLLLLFGGFLLNKGSVPPYCAWISKVSFFNYAYEALAINEFHYFPEDFTFTAPINTTKLPPLRVTGEGVLKEFGFNVDLFYLDVFMLGILGTLCCALTYVLLYFSGHTLLDDFEDLTGR-TVAWVLLRAG 1199
BLAST of mRNA_D-dudresnayi_contig975.28542.1 vs. uniprot
Match: A0A8J4D8V3_9CHLO (ABC transporter domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D8V3_9CHLO) HSP 1 Score: 56.2 bits (134), Expect = 3.920e-6 Identity = 37/121 (30.58%), Postives = 60/121 (49.59%), Query Frame = 1 Query: 16 LVAFNLSLAGILAACGAGAKSSQEALASGCLVVLFSALLSGFLVAKDELPAGWGVLAWLSPMGRGFEALVANEFSPYGAIFRLSTKIGTVTAYTNPMTGDEVLRCFGFDGGRYFVDLAILA 378 LV+ N++ A + A GA A S+ A G L ++ L GFL+ K +P ++ S +EAL NEF + F + I T +TG+ VL+ FGF+ +++D++ A Sbjct: 638 LVSSNITAATMCMAIGAAAPSNPIANLVGSLTLMLLLLFGGFLLNKGSVPPYCAWVSKASFFNYAYEALAINEFHSFPGDFTFTPPINTTKLPPLRVTGEGVLKEFGFNVDLFYLDVSCWA 758
BLAST of mRNA_D-dudresnayi_contig975.28542.1 vs. uniprot
Match: A0A7R9YQJ6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YQJ6_9CHLO) HSP 1 Score: 53.9 bits (128), Expect = 1.820e-5 Identity = 47/151 (31.13%), Postives = 70/151 (46.36%), Query Frame = 1 Query: 16 LVAFNLSLAGILAACGAGAKSSQEALASGCLVVLFSALLSGFLVAKDELPAGWGVLAWLSPMGRGFEALVANEFSPYGAIFRLSTKIGTVTAYTNP-----------MTGDEVLRCFGFD-GGRYFVDLAILAGVGVCGLVLAFVLLKRSR 432 LV N++ + A GAG S A +G L VL ALL GFL++++ +PA + LS + FE L+ NEF FR TA+ P ++GDE+L+ FGF +D + G+ V + +LL +R Sbjct: 156 LVLHNMASTALSMALGAGLPSVAAANMAGSLAVLACALLGGFLLSRNRMPAVVDWASSLSYVRYSFEGLLINEFHGVDG-FRF-------TAFHQPGVPSDKVPHVDVSGDEILQTFGFRISDEALLDDTLRLGLLVAAFLGGTLLLLHAR 298 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig975.28542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig975.28542.1 >prot_D-dudresnayi_contig975.28542.1 ID=prot_D-dudresnayi_contig975.28542.1|Name=mRNA_D-dudresnayi_contig975.28542.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=79bp MGRGFEALVANEFSPYGAIFRLSTKIGTVTAYTNPMTGDEVLRCFGFDGGback to top mRNA from alignment at D-dudresnayi_contig975:28379..29568- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig975.28542.1 ID=mRNA_D-dudresnayi_contig975.28542.1|Name=mRNA_D-dudresnayi_contig975.28542.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1190bp|location=Sequence derived from alignment at D-dudresnayi_contig975:28379..29568- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig975:28379..29568- >mRNA_D-dudresnayi_contig975.28542.1 ID=mRNA_D-dudresnayi_contig975.28542.1|Name=mRNA_D-dudresnayi_contig975.28542.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=474bp|location=Sequence derived from alignment at D-dudresnayi_contig975:28379..29568- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |