mRNA_D-dudresnayi_contig9713.28490.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI) HSP 1 Score: 218 bits (556), Expect = 1.340e-71 Identity = 118/124 (95.16%), Postives = 119/124 (95.97%), Query Frame = 1 Query: 1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKK 372 MSGKGKGGRG KKSTTRSAKAGLQFPVGRVGRFLK GKYA RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK VKK Sbjct: 1 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI) HSP 1 Score: 216 bits (551), Expect = 4.580e-70 Identity = 117/123 (95.12%), Postives = 118/123 (95.93%), Query Frame = 1 Query: 1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVK 369 MSGKGKGGRG KKSTTRSAKAGLQFPVGRVGRFLK GKYA RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK VK Sbjct: 46 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE) HSP 1 Score: 205 bits (522), Expect = 3.120e-66 Identity = 109/120 (90.83%), Postives = 115/120 (95.83%), Query Frame = 1 Query: 1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 360 MSGKGKGGRG KKST++S+KAGLQFPV R+GR+LK GKYA RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK Sbjct: 1 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI) HSP 1 Score: 205 bits (522), Expect = 1.600e-65 Identity = 109/120 (90.83%), Postives = 115/120 (95.83%), Query Frame = 1 Query: 1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 360 MSGKGKGGRG KKST++S+KAGLQFPV R+GR+LK GKYA RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK Sbjct: 52 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 169
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA) HSP 1 Score: 203 bits (516), Expect = 2.110e-65 Identity = 107/126 (84.92%), Postives = 117/126 (92.86%), Query Frame = 1 Query: 1 MSGKGKGGRG-DAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKKA 375 M+GKGKGGRG +AKKST++S+KAGLQFPV R+GRFLK G+YA+RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK A Sbjct: 1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKKTASAA 126
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI) HSP 1 Score: 201 bits (512), Expect = 6.210e-65 Identity = 106/120 (88.33%), Postives = 113/120 (94.17%), Query Frame = 1 Query: 1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 360 MSGKGKGGRG KK T+RSAKAGLQFPVGR+GRF+K GKY+ RVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK Sbjct: 1 MSGKGKGGRG--KKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA) HSP 1 Score: 198 bits (504), Expect = 1.130e-63 Identity = 106/123 (86.18%), Postives = 113/123 (91.87%), Query Frame = 1 Query: 1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVK 369 MSGKGKGGRG KKSTT SAKAGLQFPVGR+GR+L+ GKYA R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKK K Sbjct: 1 MSGKGKGGRG-GKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: A0A835ZBB6_9STRA (Histone H2A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB6_9STRA) HSP 1 Score: 198 bits (504), Expect = 1.570e-63 Identity = 105/126 (83.33%), Postives = 115/126 (91.27%), Query Frame = 1 Query: 1 MSGKGKGGRG-DAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKKA 375 M+GKGKGGRG + KK T++SAKAGLQFPV R+GR+LK G+YA RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELN+LLG VTIASGGVLPNIHAVLLPKK KA Sbjct: 1 MAGKGKGGRGAEGKKITSQSAKAGLQFPVARMGRYLKQGRYADRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNRLLGNVTIASGGVLPNIHAVLLPKKTAAKA 126
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA) HSP 1 Score: 198 bits (503), Expect = 1.610e-63 Identity = 104/120 (86.67%), Postives = 113/120 (94.17%), Query Frame = 1 Query: 1 MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 360 MSGKGKGGRG+ KKSTT SAKAGLQFPVGR+GR+L+ GKYA R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHA+LLPKK Sbjct: 1 MSGKGKGGRGE-KKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKK 119
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA) HSP 1 Score: 198 bits (503), Expect = 2.890e-63 Identity = 103/123 (83.74%), Postives = 116/123 (94.31%), Query Frame = 1 Query: 7 GKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKKA 375 GKGKGGRGD KK+ ++SAKAGLQFPVGRVGRFLK G+YA+RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RI+PRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK K+ Sbjct: 5 GKGKGGRGD-KKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSKS 126 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9713.28490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9713.28490.1 >prot_D-dudresnayi_contig9713.28490.1 ID=prot_D-dudresnayi_contig9713.28490.1|Name=mRNA_D-dudresnayi_contig9713.28490.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=126bp MSGKGKGGRGDAKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVback to top mRNA from alignment at D-dudresnayi_contig9713:1754..2131+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9713.28490.1 ID=mRNA_D-dudresnayi_contig9713.28490.1|Name=mRNA_D-dudresnayi_contig9713.28490.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=378bp|location=Sequence derived from alignment at D-dudresnayi_contig9713:1754..2131+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9713:1754..2131+ >mRNA_D-dudresnayi_contig9713.28490.1 ID=mRNA_D-dudresnayi_contig9713.28490.1|Name=mRNA_D-dudresnayi_contig9713.28490.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=756bp|location=Sequence derived from alignment at D-dudresnayi_contig9713:1754..2131+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |