mRNA_D-dudresnayi_contig9703.28482.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9703.28482.1 vs. uniprot
Match: A0A6H5JD89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD89_9PHAE) HSP 1 Score: 198 bits (504), Expect = 1.070e-58 Identity = 95/130 (73.08%), Postives = 109/130 (83.85%), Query Frame = 1 Query: 43 VCTTGRMVPPPAELLQRFDLLNNLYGGLLDKKTKQPVLRAEAREVVKRLRVHIKTSFLSDPPDLPLCVEAGKDSPTGCPRYRCVRGTNDLEGYHLHMRLLVARCISPRLAHLLLLEHDYRWNLRQSIKNR 432 V GR++P PAELL+RFDL+NNLYGGL+DKKTKQP+ RAEA E +KRLRVHI SD P+ L EAGKD+ T CP +RC+RGTNDLEGYHLHMRLLVA CISPRLAHLLLLE++YRWNLRQS+KNR Sbjct: 201 VLAAGRLIPRPAELLERFDLVNNLYGGLIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNR 330
BLAST of mRNA_D-dudresnayi_contig9703.28482.1 vs. uniprot
Match: A0A6H5KEU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU8_9PHAE) HSP 1 Score: 192 bits (488), Expect = 2.090e-55 Identity = 92/125 (73.60%), Postives = 107/125 (85.60%), Query Frame = 1 Query: 58 RMVPPPAELLQRFDLLNNLYGGLLDKKTKQPVLRAEAREVVKRLRVHIKTSFLSDPPDLPLCVEAGKDSPTGCPRYRCVRGTNDLEGYHLHMRLLVARCISPRLAHLLLLEHDYRWNLRQSIKNR 432 R++P PAELL+RFD++NNLYGGLLDKKTKQP+ RAEA E +KRLRVHI SD P+ L EAGKD+ T CP +RC+RGTNDLEG+HLHMRLLVA CISPRLAHLLLLE++YRWNLRQS+KNR Sbjct: 381 RLIPRPAELLKRFDVVNNLYGGLLDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDAPNEALYFEAGKDAETLCPLFRCIRGTNDLEGFHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNR 505
BLAST of mRNA_D-dudresnayi_contig9703.28482.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE) HSP 1 Score: 194 bits (494), Expect = 7.900e-55 Identity = 93/125 (74.40%), Postives = 107/125 (85.60%), Query Frame = 1 Query: 58 RMVPPPAELLQRFDLLNNLYGGLLDKKTKQPVLRAEAREVVKRLRVHIKTSFLSDPPDLPLCVEAGKDSPTGCPRYRCVRGTNDLEGYHLHMRLLVARCISPRLAHLLLLEHDYRWNLRQSIKNR 432 R++P PAELL+RFDL+NNLYGGL+DKKTKQP+ RAEA E +KRLRVHI SD P+ L EAGKD+ T CP +RC+RGTNDLEGYHLHMRLLVA CISPRLAHLLLLE++YRWNLRQS+KNR Sbjct: 779 RLIPRPAELLERFDLVNNLYGGLIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNR 903
BLAST of mRNA_D-dudresnayi_contig9703.28482.1 vs. uniprot
Match: A0A1Y2A9B5_9FUNG (3'-5' exonuclease domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2A9B5_9FUNG) HSP 1 Score: 121 bits (303), Expect = 3.750e-29 Identity = 61/126 (48.41%), Postives = 83/126 (65.87%), Query Frame = 1 Query: 58 RMVPPPAELLQRFDLLNNLYGGLLDKKTKQPVLRAEAREVVKRLRVHIKTSFLSDPPDLPLCVEAGKDSPTGCPRYRCVRGTNDLEGYHLHMRLLVAR-CISPRLAHLLLLEHDYRWNLRQSIKNR 432 R++P ELL+R+D + N + +LD KT +P+ R+ ++ V+ LR HI+ LSD PD+PL G+ S G P YRC RGTN EGYH HMR L+ SP L HLLLLE ++RWN+R ++KNR Sbjct: 510 RLIPCKEELLKRYDFVCNTFQDILDSKTNEPLFRSNTKKEVRNLRKHIQNGCLSDVPDIPLYFLEGRTS-QGLPIYRCARGTNSNEGYHRHMRKLLHHYASSPMLLHLLLLEFNFRWNIRMAVKNR 634
BLAST of mRNA_D-dudresnayi_contig9703.28482.1 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI) HSP 1 Score: 114 bits (286), Expect = 7.730e-27 Identity = 59/126 (46.83%), Postives = 83/126 (65.87%), Query Frame = 1 Query: 58 RMVPPPAELLQRFDLLNNLYGGLLDKKTKQPVLRAEAREVVKRLRVHIKTSFLSDPPDLPLCVEAGKDSPTGCPRYRCVRGTNDLEGYHLHMRLLVAR-CISPRLAHLLLLEHDYRWNLRQSIKNR 432 R+VPPP+ELL+RFD + +G +D +K+ +LR ++ + V LR HI LSDP + + GK + G YRCVRGTND+EGYH ++R L+A C SP LA +LLE ++RWNL+ +KNR Sbjct: 620 RLVPPPSELLKRFDKVVQEFGNCVDNISKEVLLRPKSMKAVSLLRKHIVAGCLSDPDGVAMYYAVGKTT-DGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNR 744
BLAST of mRNA_D-dudresnayi_contig9703.28482.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE) HSP 1 Score: 111 bits (278), Expect = 9.510e-26 Identity = 60/129 (46.51%), Postives = 84/129 (65.12%), Query Frame = 1 Query: 49 TTGRMVPPPAELLQRFDLLNNLYGGLLDKKTKQPVLRAEAREVVKRLRVHIKTSFLSDPPDLPLCVEAGKDSPTGCPRYRCVRGTNDLEGYHLHMRLLVAR-CISPRLAHLLLLEHDYRWNLRQSIKNR 432 ++ R+VP LL+RFD + +GG +D + + +LR +A + V++LR HI+ LSDP + + GK+ G YRCVRGTND+EGYH ++R L+A C SP LA +LLE +YRWNLR IKNR Sbjct: 573 SSRRLVPRRDVLLKRFDRVIEEFGGCVDNTSGEVLLRPKAMKAVRQLRKHIENDCLSDPDGMAMYFAIGKNK-HGLTDYRCVRGTNDVEGYHRYLRTLLASYCASPSLAQSVLLEFNYRWNLRMMIKNR 700
BLAST of mRNA_D-dudresnayi_contig9703.28482.1 vs. uniprot
Match: A0A6H5JPK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK9_9PHAE) HSP 1 Score: 110 bits (276), Expect = 1.110e-25 Identity = 60/126 (47.62%), Postives = 84/126 (66.67%), Query Frame = 1 Query: 58 RMVPPPAELLQRFDLLNNLYGGLLDKKTKQPVLRAEAREVVKRLRVHIKTSFLSDPPDLPLCVEAGKDSPTGCPRYRCVRGTNDLEGYHLHMR-LLVARCISPRLAHLLLLEHDYRWNLRQSIKNR 432 R+VP LL+RF+L+ + ++D K+ + +LR AR+ V+ LR HI++ LSDP +PL +GK+S G RCVRGTN EGYH ++R LL C SP LAH +LLE +YRWN+R ++KNR Sbjct: 256 RLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYTSGKNS-AGITTRRCVRGTNCTEGYHRYVRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNR 380
BLAST of mRNA_D-dudresnayi_contig9703.28482.1 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE) HSP 1 Score: 105 bits (262), Expect = 1.390e-23 Identity = 56/125 (44.80%), Postives = 79/125 (63.20%), Query Frame = 1 Query: 58 RMVPPPAELLQRFDLLNNLYGGLLDKKTKQPVLRAEAREVVKRLRVHIKTSFLSDPPDLPLCVEAGKDSPTGCPRYRCVRGTNDLEGYHLHMRLLVARCISPRLAHLLLLEHDYRWNLRQSIKNR 432 R+VPPP+ELL+ FD + +G +D +K+ +LR ++ + V+ LR HI LSDP + + GK + G RYRCVRGTND+EGYHL + SP LA +LLE ++RWNL+ +KNR Sbjct: 868 RLVPPPSELLKPFDKVVEEFGNCVDNVSKEALLRPKSMKAVRLLRKHIVAGCLSDPDGVAMYYAIGKTT-DGLVRYRCVRGTNDVEGYHL-----ASYSASPALAQSVLLEFNFRWNLKMMVKNR 986
BLAST of mRNA_D-dudresnayi_contig9703.28482.1 vs. uniprot
Match: A0A6H5KLP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLP1_9PHAE) HSP 1 Score: 103 bits (256), Expect = 8.330e-23 Identity = 57/126 (45.24%), Postives = 79/126 (62.70%), Query Frame = 1 Query: 58 RMVPPPAELLQRFDLLNNLYGGLLDKKTKQPVLRAEAREVVKRLRVHIKTSFLSDPPDLPLCVEAGKDSPTGCPRYRCVRGTNDLEGYHLHMR-LLVARCISPRLAHLLLLEHDYRWNLRQSIKNR 432 R+VP LL+RF+L+ + ++D K+ + +LR AR+ V+ LR HI++ LSDP +PL G RCVRGTN EGYH ++R LL C SP LAH +LLE +YRWN+R ++KNR Sbjct: 256 RLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYTKS----AGITTRRCVRGTNCTEGYHRYLRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNR 377
BLAST of mRNA_D-dudresnayi_contig9703.28482.1 vs. uniprot
Match: A0A6H5K9U3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U3_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 7.840e-21 Identity = 49/108 (45.37%), Postives = 74/108 (68.52%), Query Frame = 1 Query: 112 LYGGLLDKKTKQPVLRAEAREVVKRLRVHIKTSFLSDPPDLPLCVEAGKDSPTGCPRYRCVRGTNDLEGYHLHMR-LLVARCISPRLAHLLLLEHDYRWNLRQSIKNR 432 ++G ++D K+ + +LR++A + V L HI+T LSDP +PL G+++ G +RCVRGTN EGYH ++R LL + C SP LAH +LLE ++RWN+R ++KNR Sbjct: 1 MFGNVVDAKSGEKLLRSDAMKDVNLLLKHIETGCLSDPEGVPLYYPTGQNA-AGITTHRCVRGTNCTEGYHRYLRRLLSSYCASPALAHSVLLEFNFRWNVRMAVKNR 107 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9703.28482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9703.28482.1 >prot_D-dudresnayi_contig9703.28482.1 ID=prot_D-dudresnayi_contig9703.28482.1|Name=mRNA_D-dudresnayi_contig9703.28482.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=144bp MLLFLGLFVHSLRHVCTTGRMVPPPAELLQRFDLLNNLYGGLLDKKTKQPback to top mRNA from alignment at D-dudresnayi_contig9703:2302..2733+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9703.28482.1 ID=mRNA_D-dudresnayi_contig9703.28482.1|Name=mRNA_D-dudresnayi_contig9703.28482.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=432bp|location=Sequence derived from alignment at D-dudresnayi_contig9703:2302..2733+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9703:2302..2733+ >mRNA_D-dudresnayi_contig9703.28482.1 ID=mRNA_D-dudresnayi_contig9703.28482.1|Name=mRNA_D-dudresnayi_contig9703.28482.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=864bp|location=Sequence derived from alignment at D-dudresnayi_contig9703:2302..2733+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |