mRNA_D-dudresnayi_contig9675.28462.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9675.28462.1 vs. uniprot
Match: A0A7S3H6Q6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6Q6_9STRA) HSP 1 Score: 311 bits (796), Expect = 2.030e-95 Identity = 190/523 (36.33%), Postives = 282/523 (53.92%), Query Frame = 3 Query: 66 MQRNRTNPILSELYTLGIPQIEFQKLGKPSTAHTSGHLPVEAHHEREFFCLDEFGPDAELSEVFKFGSAVLGEIGIRSSRRLAFDNESTVQSAVELVLKDVIQLLDLVEKVVVLSECSVTNEVGSKHKTHKADFWIVYLDGRPILVVEVKTPLP-GTTNDDDGTNKLTNPNVLGQMFDYLRNNKDFYGATHVFGIVTTMKHWKFVWFPESDALARSST-LPVTDLEISPS-PQSRTVCTSQIYKQDDEALPRLLMSLIKKAQSTSFQPVSLLTTARLYVSLRSQSWQWLRPTQAVVDAWSEALTLQLAYQPSPTTEYVVLKHLQRSAEAKVWFALIHNTSLPGTICVIKQMFDLADATREAHLWNLINKCASVAALQVSGRPSVVMPFVVLAKESNIGGASTQVEFVFDAALWGLQNNVLPGDIPVQ-LEALAASMRAIAASTNLLNARDVALIAVERIAKEGFLHNDIEWRHVALIPEFDASGAVVRLLPGLIDLESLVEAADPAEALATMKQRIDEISQGV 1622 M+RN NP +ELYT+G+P++ F K+ ST H S H+P + F L EF + ++ + GS +L G+ + R ++F E +Q V+ VL DVI+L L V V +E + T E GSKH HK D WIVY +G+P+ VVEVK+P P G N L +PNV+GQ+FDY+ + F+G HVF I+TT+K+++ W P SD+ A S P D ++P+ P R + + + D L R+L+S IKK+ ++F V + R+Y+ L + W W R A + TL L + ++ + V+K L R++ KVW L +T +CV KQ+ D A +E +W N+ V G+P VVMPFVVLA+E + G V F D W ++N G +PV+ L L+ + I A N + A+ A RIA+ G LH D+EWRHV ++P FD G VV + P +D + +P AL TM++R+ + +GV Sbjct: 1 MRRNDLNPTCAELYTMGLPELRFTKVLSLSTHHASKHVPAAFIEKDIFKILREFSEEY-AADTLQHGSLILNSPGVEA-RHVSFGGEGDIQVLVQHVLNDVIRLSGLKNIVRVGTEWAYTTEDGSKHSAHKPDHWIVYYNGKPVAVVEVKSPEPDGKRPLVQPANILDHPNVVGQLFDYIVGQQSFHGQHHVFAILTTLKYFRIAWLPHSDSYAASDIDAPPADAVVAPTDPTMRILHCTPLIPHTDTRLARILVSAIKKSAGSTFGTVHAFSNQRMYLRLVADGWHWHRLPPARAERLQSDATLNLTATANRSSHFTVIKSLHRTSNCKVWVVLAGDTE---RVCVAKQLLDAAKLEQEEQVWAEANQHTGVFCSTGGGQPLVVMPFVVLARE--VDGI---VAFNTDFYAWSAEDNTTAGPVPVKILRELSRTAALITAQG--WNPQTAAVAAATRIAQRGILHQDLEWRHVGMLPIFDGQGNVVDVRPVFVDFDQCQTGVEPGLALRTMQERLAVLVEGV 511
BLAST of mRNA_D-dudresnayi_contig9675.28462.1 vs. uniprot
Match: A0A7V7WZX9_9BACT (DUF5898 domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V7WZX9_9BACT) HSP 1 Score: 128 bits (321), Expect = 9.360e-28 Identity = 139/531 (26.18%), Postives = 218/531 (41.05%), Query Frame = 3 Query: 93 LSELYTLGIPQIEFQKLGKPSTAHTSG-HLPVEAHHEREFFCLDEFGPDAE-----LSEVFKFGSAVLGEIGIRSSRRLAFDNESTVQSAVELVLKDVIQLLDLVEKVVVLSECSVTNEVGSKHKTHKADFWIVYLDGRPILVVEVKTPLPGTTNDDDGTNKLTNPNVLGQMFDYLRNNKDFYGATHVFGIVTTMKHWKFVWFPESD--ALARSSTLPVTDLEISPSPQSRTVC--TSQIYKQDDEALPRLLMSLIKKA--QSTSFQP-VSLLTTARLYVSLRSQSWQWLRPTQAVVDAWSEALTLQLAYQP--SPTTEYVVLKHLQRSAEAKVWFALIHNTSL-----PGTICVIKQMFDLADATR---------EAHLWNLINKCASVAALQVSGRPSVVMPFVVLAKES-NIGGASTQVEFVFDAALWGLQNNVLPGDIPVQLEALAASMRAIAASTNLLNARDVALIAVERIAKEGFLHNDIEWRHVALIPEFDASGAVVRLLPGLIDLESLVEAADPAEALATMKQ 1595 +S+ + GI + LG S T+ H P+ + ++ F D E +E+F SSR L ES VQ V+ VLKD++ + EK+ VL+E +++ KADFWI+ +G P+ VEVK P NK GQ++DYL + F+G +V G+ T W F W +SD A+A + + + SP + + ++ ++ D L L S +KK + S P V LL + R Y+ + W W + QL+++P + + +L+ A+ +VW A S G + V+K +A+ + E W+ + SV + GR +VVMPF ++ NI D+ W + P V + L + N RDV + R AK +H+DIEWRHVA+ P + A RL IDL + A+ +A A M + Sbjct: 52 VSQYFRAGIEIPKLTMLGNKSGPSTNNKHQPLTSIVDKSFGIFAITDKDLEHCGTRTTEIF-------------SSRELQASTESDVQGFVKTVLKDMMYAARVEEKLSVLAEMTISEL--------KADFWILSFNGYPVGAVEVKKP--------GRVNKQQQYINYGQLYDYLLRIRSFHGIRNVIGLFTNWDEWTFGWLEDSDLSAVATDDAYELDNDVVFSSPSTERILHMSATYHRTDSRRLATALYSWLKKLVRNAGSIAPAVPLLHSKRSYIFMSRDQWVWQSGIPNIT---------QLSFKPPRKNSDTFYLLRDFHGGADGRVWLACHVEKSRMLGASKGRLAVVKFQRRIAEGRKGDELQRVKAEVDRWHALG-ITSVYWTTLCGRHAVVMPFAFHFNQNPNI-----------DSKWWKPPDENAPVKDFVSVHDLVSKC----------NPRDVLESCIARCAKVKLVHDDIEWRHVAIFPTKTLTSAKWRLEFCFIDLSGVTRASSKEQAEAMMAE 522
BLAST of mRNA_D-dudresnayi_contig9675.28462.1 vs. uniprot
Match: L8H4S1_ACACA (DUF5898 domain-containing protein (Fragment) n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H4S1_ACACA) HSP 1 Score: 89.7 bits (221), Expect = 2.810e-15 Identity = 93/394 (23.60%), Postives = 145/394 (36.80%), Query Frame = 3 Query: 462 DFWIVYLDGRPILVVEVKTPLPGTTNDDDGTNKLTNPNVLGQMFDYLRNNKDFYGATHVFGIVTTMKHWKFVWFPESDALARSSTLPVTD------------------------------------------------LEISPSPQSRTVCTSQIYK--QDDEALPRLLMSLIKKAQSTSFQPVSLLTTARLYVSLRSQSWQWLRPTQAVVDAWSEALTLQLAYQPSPTTEYVVLKHLQRSAEAKVWFALIHNTSLPGTICVIK--QMFDLADATR----EAHLWNLINKCASVAALQVSGRPSVVMPFVVLAKESNIGGASTQVEFVFDAALWGLQNNVLPGDIPVQLEALAASMRAIAASTNLLNARDVALIAVERIAKEGFLHNDIEWRHV 1475 D W++ G P+ VVEVK P + + V GQ+FDY+R K ++G HV GIVTT W+F WF ESD A + T + +E+ SP R + +++Y Q L LL S++ K + PV +L ++ + V + W W R + D + + A T + +L+ L+ A+ + W A TS GT C IK + +AD T+ EA +W V ++G P++VMP+ ++ A QV A++R+A G+ H+D+ WRHV Sbjct: 109 DIWVLTASGVPVGVVEVKRP---------SLTIMDHMRVHGQIFDYMRCIKTYFGVKHVLGIVTTYTEWRFYWFKESDHYAAADTCAAIENLRDARKEDVIDSVRDDDXXXXXXXXXXXXXXXDLNMTFTQSDDDDGPVEVDESP--RVLHGTKVYDSAQAGPELSALLASIVYKMSKSPCTPVLVLPSS-VRVCMDQTQWFWARVPATIQDVNDADMPTRRA------TRFFLLRDLRGGADGRAWRAC--TTS--GTGCAIKFCKRASVADQTKRLKAEAEVWCAAWGVKGVRVATLAGEPALVMPYARAVQQPLSNKAKQQVPE-----------------------------------------------AIDRMASSGYCHDDLAWRHV 433 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9675.28462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9675.28462.1 >prot_D-dudresnayi_contig9675.28462.1 ID=prot_D-dudresnayi_contig9675.28462.1|Name=mRNA_D-dudresnayi_contig9675.28462.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=526bp MQRNRTNPILSELYTLGIPQIEFQKLGKPSTAHTSGHLPVEAHHEREFFCback to top mRNA from alignment at D-dudresnayi_contig9675:1269..3088+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9675.28462.1 ID=mRNA_D-dudresnayi_contig9675.28462.1|Name=mRNA_D-dudresnayi_contig9675.28462.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1820bp|location=Sequence derived from alignment at D-dudresnayi_contig9675:1269..3088+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9675:1269..3088+ >mRNA_D-dudresnayi_contig9675.28462.1 ID=mRNA_D-dudresnayi_contig9675.28462.1|Name=mRNA_D-dudresnayi_contig9675.28462.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=3156bp|location=Sequence derived from alignment at D-dudresnayi_contig9675:1269..3088+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |