mRNA_D-dudresnayi_contig9673.28461.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9673.28461.1
Unique NamemRNA_D-dudresnayi_contig9673.28461.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9673.28461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9673contigD-dudresnayi_contig9673:1977..6071 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size722
Cds size450
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9673.28461.1prot_D-dudresnayi_contig9673.28461.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9673 1977..5801 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930919.6062818-CDS-D-dudresnayi_contig9673:1976..22641622930919.6062818-CDS-D-dudresnayi_contig9673:1976..2264Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9673 1977..2264 -
1690557965.5888684-CDS-D-dudresnayi_contig9673:1976..22641690557965.5888684-CDS-D-dudresnayi_contig9673:1976..2264Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9673 1977..2264 -
1622930919.626095-CDS-D-dudresnayi_contig9673:3182..32481622930919.626095-CDS-D-dudresnayi_contig9673:3182..3248Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9673 3183..3248 -
1690557965.5985625-CDS-D-dudresnayi_contig9673:3182..32481690557965.5985625-CDS-D-dudresnayi_contig9673:3182..3248Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9673 3183..3248 -
1622930919.6464365-CDS-D-dudresnayi_contig9673:5705..58011622930919.6464365-CDS-D-dudresnayi_contig9673:5705..5801Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9673 5706..5801 -
1690557965.6079705-CDS-D-dudresnayi_contig9673:5705..58011690557965.6079705-CDS-D-dudresnayi_contig9673:5705..5801Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9673 5706..5801 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930919.6673403-UTR-D-dudresnayi_contig9673:5801..60711622930919.6673403-UTR-D-dudresnayi_contig9673:5801..6071Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9673 5802..6071 -
1690557965.6174335-UTR-D-dudresnayi_contig9673:5801..60711690557965.6174335-UTR-D-dudresnayi_contig9673:5801..6071Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9673 5802..6071 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9673.28461.1

>prot_D-dudresnayi_contig9673.28461.1 ID=prot_D-dudresnayi_contig9673.28461.1|Name=mRNA_D-dudresnayi_contig9673.28461.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=150bp
MGVTTKAEASKLTVAKLKEELASRGLSQEGLKAVLCERLIESIEADTTEG
QEPEVEEISEDSAAEPEAMEQEDEEQDAPAAEAEAETTEGETASAEAEAE
DASAEEPAAASEDAAEEVDSAEVSEAQGEETAAAGSDTAKVVVADGAEVT
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mRNA from alignment at D-dudresnayi_contig9673:1977..6071-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9673.28461.1 ID=mRNA_D-dudresnayi_contig9673.28461.1|Name=mRNA_D-dudresnayi_contig9673.28461.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=4095bp|location=Sequence derived from alignment at D-dudresnayi_contig9673:1977..6071- (Desmarestia dudresnayi DdudBR16 monoicous)
CTCTGCAGGGGTTTCCCCTGTACCTGAGGGGAAGTCCAAGACTGGGAAGA
ACGACAACCCCACGCCGACAACCGAGCAATCTCAGCGACTCTCAAAGAGA
CACCGACCAACCCTTTTGTTGTCCTACAACATCCAGCCGTTGTTACAAAG
TGGATCGGGAAAACCGCTGCGAGTCTCTCGTTGACCCCACAAAACCAAGG
ATCAAAGGCACCACAAGAGGCCTTTTCTCATTCTCCCCCGCCCCTTCTCT
CTCCCTCTCCAACAAAAACTATGGGTGTCACCACTAAGGCAGAGGCCTCG
AAGCTCACGGTTGCCAAGCTGAAAGAAGAGTTGGCGTCGAGGGGGCTATC
CCAGGAGGGACTCAAGGTTAGTGCTGTTGCTTTTGCTCATCGCCCAGGGT
GTTGGGGGCGGTGGTTTTTTGTTGGCCTGTGTGCCACATAAAGCTCCCGC
CTTTTTGCGAGTAGAGAGGCCTGGTCGGTCGTACTTCAGGATAGCGCCGA
CTGTCACCACGAGTCGGCGTTGTGGTAGTTGTAATTTTTTATGCTGCCTT
CTAATCCTCGCTTCAGGGTCTCGCTCCAAAATTTCCTTTGGGGGCCTCCA
TGGTTTTTGCGGTATTGGTTTGATTTCTCATCTGTTTTTTGTGTTGTTGG
TACCTTGTGCTTTAGTGGTGCAGACAACTACGTACCACCAACTACCAGAA
TACTAACTACTCGTACAAGAAGTACGTCGACTGCTGTTGTCGTGAGGAGC
TCTTTCTCTGATGATAGTGTTATACGACAGTAGTAGTAGTAGTACAGCGG
CAATCAGGCAACAGAATGGAAGGGATGCGAGAGATCGCCCTCCGCTTTAT
TTGTTTCTGGCGCACTTCGTTTTCGGACCGTTGTAGCGTAGGGGATGCAA
GCGGTGCACTCGGCTGTGGAAGACATGGGTCTCGAAATTGACCTGCAACA
CAAACAGAGGCTCTAGACTCTAGATGATTTTAGATATCGTACGATTTTCA
GCTCTTTTTTATCGTATCGTTTTTTTTTATTTTTGCAAGTAAATGAAAGG
GGTGGCGCGATGGTCTACGAGACTAAGCGTTCGCCTCTGTTGGCGGAAGT
TGGGAGTTCAATTCCCGGTGGCACTGTTTGTGTGCCATCTTCCGCCGCGG
AAAACGCGAGAGCGTAAGTGAGCACAATTCGATGAAACTCGACGAGGGAA
GAAAGTGCTACACTGTTCTCGCGATAAAAATGTAGGCACGTACCATAGTG
GGAAGGCGGCAGGAGCGCCTACTTGTTGTTGATTCACACATCAATTAGCT
CATCGTCCAAGATCTAGCCCGTGGTCACACAAGTGCTGAGCCCTATGTAG
GAAGATCCGGAAAGCACAGAATACAGCAAACAGAAGGGGTACACAGGACC
GAATAGGTACGTACACCAACTCATACTGGGTGATGTGTAAACTGACCTAC
TAACACTACCGCAGGTATCCATTCGACTACGGCACCAACCGTGTTCTCCC
CCCTTTCCCACTACTAACGAACTCGTGGCTGCTAGCTACAGCTACTGTGT
GACCTCGGATCTGAGTTACGAAGAGAGATGGAGCTATCATAGAGAAATAA
TAGGGCGAAGATAATAGGTGGGACGGAAAAAAAAAAAAAAAGTAAATCAG
CCGAACCAGAGCCAGGTACTACTCTATTTGTGATAATTTGACCTTGCGCA
TTCTGTCGCTACAGTATAATACCCAGATACTGTGTAGTGCAGTGGCTCCC
ATGGCTAGTGCCAGGCTGGACAATATAGGGTGATGACGGTACTACTATGG
GCCAACATCTTGTGCAGTACTGTCAATGGGCATAAACCACAAATAATTGT
CAATCGAGATCGAGATCATATCGTATCATGTCGTATCATATCATATCATA
TCATATCACATCACAGTTGTTCAGTTCTCCATTCCTCACGTCTCGCTTGC
CCCCACGCTCGACCTGTGGCGCCCAATCCTTTGTTGAGATTTGCGGTTGC
GTTTTTTTCTACCTATCTCAAGCACGCGGGACAAGGGCCCTTGTTGTATG
GATGTAGGTATTGTAAGCTGCCCCCCGTCCATCGTTGCGTTCAACCAACT
ACTATTATGATATGATCAGGTATATTTTATGTGCATGGTGCATGATGCTA
TCGTAGTCAAACGATCTTGATTTACTTAAAGTTGATCGAGTGTAAAGTCT
CGAGTTTGCAAACCCGCGGTCTTTGGCGGGCACAACAAGAACAAAGCTTG
GAGTCACTCCCGAATCCCCTACTCTCACACAGAGCAACCACAAAAGAGCG
GAGGGTACAGGAAACCTACCTGGTGCGTGTTTACCTCATCTATCATGTAG
CGTCATACTGATTGTGTTCTTGGGGAGCCATTTCATAACGCCGCTGAATA
TAACAGTGGACGGTTGGGTTAGGGTTGAAGTTGAGGTCGCGTTGGGTTGG
GTCAGCTCTCTACCAAATGAACAATCACAAAAAGAAGAAGGGCACCCACA
TTTTTTGGACAAAATGGTAATACAGTAGGACAGTAGTAGTAGTAATAATA
GTCCTCGTGTAGCGAGTCAATGCTGTGACCTAAATCGAAGGCTTAAGAGC
TTACTGCTGGATCGTAGGCATGCGACTAACCTTGTTCTGTTTGTGCTGCG
CTACTATCATACTACTACTACTACTACTACTACTGTTGTTGCACTGCTGC
TTCTGTACTCGTACGCCTATGTACATGTACTTGTTCGATCTTGGTACTTT
TTCTTTTTTTCGTCGTTTTTTGTTTCCGCTTGCGTGTATTTTGTTGCCTG
TTCGTTTTGCTTTGGTCACACAGGCGGTCCTCTGCGAGAGGCTTATCGAA
AGCATTGAGGCCGACACGACTGAGGGGCAGGAGCCCGAGGTGACCTTGTT
GTTGTCTTCTCGTTAGAAATTGTCCTTTCTACCCTATACGACATACAGTA
CAGTGGTGCCGTTTTGTTTTTTGATGAAGTGTAACACCAGTTATGGGAAT
TACCAACCATTTTGCGTGAAAAAAAACAATGGTTGGCATGTACTGGGGGG
GAGCAAGGAAGACACGGTGTGACCACGGCTTGCTCAGACAGGCGCGTTGA
GCGATGAGTAGGATAGCTCCTGTGAGCTATGATAGATATGGACACGAAAG
TAAAAATGATCTGATAAACGTATGCGTAAAAAATCAACAAAAAATGTGCA
AGACGTGAATCGTGGCGTTCCAAACGGGGCCGGGAGGGAGCCAGGCGGTA
ATCGCCAACTTTCGCTGTGGTGTGATTCTGTGGTCGCGCGGATTTCTAGC
TGTCCCTAGCTTTACCGCGATGTTGGCGTGCTGGCGGCCGGGGTTGATAT
CAACGACCCTGTGATGGGTGTTACCCGCGTCCTTTTCTGATGTCTGGCTG
CACGCTCGATTTTTGAAACAACCTCGATTTCTCCTGGTTTCGTATAATAT
ATATATATATATATTTTACGTTGTTCATCCCGGTACCGAAGCAGTTATGT
GTTTTATTGCCTTGAAGCTAAGCGATTTGTGTGTGTCTGTGTGTTTTCTG
CTCTATCCACTTGGAGTGACCTATTTGGTTTCGTTGAGACGAACACATGG
ATGGGCCTGTAGTTGTCGCGGAGGGACACGGCGTGTGGTAGACGGTCTCA
CGGCTAAATAAATGCGCCACGTCTCATGACCGCGTGACCGCTTACCATAC
CGTCCACCCCCCCCTTGGATGCGTGATCAATGGTCAAATGACTACGGTTA
GCAGCAGATGAGTATGCCCCTCCCCCCCTCCCCCACTGTGGCCATCCCAC
AACCCAGGTCGAGGAGATTAGCGAAGATTCCGCGGCCGAGCCTGAAGCGA
TGGAGCAGGAGGACGAGGAACAAGATGCGCCCGCTGCTGAAGCGGAAGCC
GAAACGACAGAAGGGGAGACTGCCTCCGCGGAAGCTGAGGCCGAGGATGC
CTCCGCGGAGGAGCCGGCCGCCGCCTCGGAGGACGCGGCCGAAGAGGTGG
ACTCGGCGGAGGTGTCCGAGGCCCAAGGAGAAGAGACGGCCGCGGCGGGG
TCAGACACGGCCAAGGTTGTTGTCGCCGACGGTGCGGAGGTTACC
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9673:1977..6071-

>mRNA_D-dudresnayi_contig9673.28461.1 ID=mRNA_D-dudresnayi_contig9673.28461.1|Name=mRNA_D-dudresnayi_contig9673.28461.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=900bp|location=Sequence derived from alignment at D-dudresnayi_contig9673:1977..6071- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGGTGTCACCACTAAGGCAGAGGCCTCGAAGCTCACGGTTGCCAAGCT
GAAAGAAGAGTTGGCGTCGAGGGGGCTATCCCAGGAGGGACTCAAGATGG
GTGTCACCACTAAGGCAGAGGCCTCGAAGCTCACGGTTGCCAAGCTGAAA
GAAGAGTTGGCGTCGAGGGGGCTATCCCAGGAGGGACTCAAGGCGGTCCT
CTGCGAGAGGCTTATCGAAAGCATTGAGGCCGACACGACTGAGGGGCAGG
AGCCCGAGGCGGTCCTCTGCGAGAGGCTTATCGAAAGCATTGAGGCCGAC
ACGACTGAGGGGCAGGAGCCCGAGGTCGAGGAGATTAGCGAAGATTCCGC
GGCCGAGCCTGAAGCGATGGAGCAGGAGGACGAGGAACAAGATGCGCCCG
CTGCTGAAGCGGAAGCCGAAACGACAGAAGGGGAGACTGCCTCCGCGGAA
GCTGAGGCCGAGGATGCCTCCGCGGAGGAGCCGGCCGCCGCCTCGGAGGA
CGCGGCCGAAGAGGTGGACTCGGCGGAGGTGTCCGAGGCCCAAGGAGAAG
AGACGGCCGCGGCGGGGTCAGACACGGCCAAGGTTGTTGTCGCCGACGGT
GCGGAGGTTACCGTCGAGGAGATTAGCGAAGATTCCGCGGCCGAGCCTGA
AGCGATGGAGCAGGAGGACGAGGAACAAGATGCGCCCGCTGCTGAAGCGG
AAGCCGAAACGACAGAAGGGGAGACTGCCTCCGCGGAAGCTGAGGCCGAG
GATGCCTCCGCGGAGGAGCCGGCCGCCGCCTCGGAGGACGCGGCCGAAGA
GGTGGACTCGGCGGAGGTGTCCGAGGCCCAAGGAGAAGAGACGGCCGCGG
CGGGGTCAGACACGGCCAAGGTTGTTGTCGCCGACGGTGCGGAGGTTACC
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