mRNA_D-dudresnayi_contig9671.28460.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: A0A482S7X5_9ARCH (RNase_PH domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S7X5_9ARCH) HSP 1 Score: 104 bits (260), Expect = 1.080e-23 Identity = 65/234 (27.78%), Postives = 122/234 (52.14%), Query Frame = 2 Query: 5 NECFVPVISDQFHDLEVPGECG--MIFQVGTFSSIGVSGSSYVEMCGSSIACKFLSLRNVNKHRSYGNQMDNGYFECEVTYSKHITALGSHQCDNDDITRLRRI-SQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSNEIVDACIDSLVGKCDQIRNLM 697 ECFVP + + E +I G + G+ GS++ E+ GS +AC + R K S + G EC+V+++ H+ G D D+I +++++ V DA P + L+ YPK ++ ++ VVL+SS +DLC +N SLAL DALV++RD+ A+ I + S +++ ++ + + + ++ ++++ +GR S + ID +C ++R ++ Sbjct: 3 TECFVPATVPKRQGEQQSNEVDQRLIMTRGWSKTEGIIGSAFAEIAGSKVACYVFAPRAAAKVNS---GFETGLVECDVSFASHLNMGGM---DEDEIDKMKKLLGSKVVDAFTPVIMLENYPKSVIYITAVVLQSSGYDLCCMLNCTSLALCDALVDLRDILSAYTIQ-TSIASQSASQSVFQSYQNQALLIASMSSIQEVTVLEVQGRFSGGDLVQAIDQAKVQCSKVREII 229
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: F0WFV6_9STRA (Exosome complex exonuclease MTR3like protein putativ n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WFV6_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 6.910e-16 Identity = 63/207 (30.43%), Postives = 103/207 (49.76%), Query Frame = 2 Query: 89 TFSSIGV----SGSSYVEMCGSSIACKFLSLRNVNKHRSYGNQMDNGYFECEVTYSKHITALGSHQC--DNDDITRLRRISQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSNEIVDACIDSLVGKCDQIRN 691 T+ +GV SGS+YVE+ G+ + C RN + R ++ G C+V ++ + D D+I +SQ+V A+ P+++LDK PK ++S +V+L+S +L I ASLALADA +EMRDL A ++ + + + E + L LP+L S+ V +G ++ V+ ID C + N Sbjct: 36 TYMQVGVIHNASGSAYVELQGTKVICAVYGPRNNPRGRRKFHE--GGQLICDVKFAPFAERNRTRNAGQDPDEID----LSQIVTKALLPAIFLDKLPKCVVSCFVVILQSDGSELATAIMCASLALADAAIEMRDLVTACNAGIVDDKLLVDLCTSEERMSQGNTMLAFLPSLQKSTFVMQQGTMTHAQVEEMIDVCSIACSSVLN 236
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: D0NP71_PHYIT (Exosome complex exonuclease MTR3-like protein n=16 Tax=Peronosporaceae TaxID=4777 RepID=D0NP71_PHYIT) HSP 1 Score: 78.6 bits (192), Expect = 9.330e-14 Identity = 62/216 (28.70%), Postives = 108/216 (50.00%), Query Frame = 2 Query: 80 QVGTFSSIGVSGSSYVEMCGSSIACKFLSLRNVNKHRSYGNQMDNGYFECEVTYSKHITALGSHQCDNDDITRLRRISQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSN----EIVDACIDSLVGKCDQIRNLMSTNLLK 715 Q+G S G +GS+YVE+ + + C R + R ++ +G C+V Y+ L + D +S +V++A+ P++ L K PK ++S+ + +L+ L A +N ASLALADA VEM D+ A + +N + E D K+ L +P++G + + G+ + E VD C D+ G IR+L++ +L++ Sbjct: 43 QLGAVS--GAAGSAYVELGRTRVLCAVYGPRTDTRARREFSK--DGQLVCDVKYAPFADKLTRRERGQDPDEM--ELSAIVEEALAPAVMLHKLPKCIISVFVTILEDDGGVLAAALNCASLALADAAVEMYDVVTASSAGIVNGSVVLDPSREEEQRGDGKLALAYMPSMGRVTYMLQAGKIHHTQLQEAVDLCTDACTGV---IRSLLTASLVQ 249
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: A0A2E7LTA3_9ARCH (Exosome complex exonuclease Rrp41 n=2 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A2E7LTA3_9ARCH) HSP 1 Score: 78.2 bits (191), Expect = 1.040e-13 Identity = 46/151 (30.46%), Postives = 80/151 (52.98%), Query Frame = 2 Query: 266 SHQCDNDDITRLRRISQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSNEIVDACIDSLVGKCDQIRNLMSTNLLKR 718 S +C R + IS+++ ++++ SL L KYP ++ + +V+L +++ A INAASLA ADA +EMRDL C+ A + +N + + +LPNLG SL+Q +G S + D D ++ ++ + L++R Sbjct: 85 SDRCRPGPSRRSKEISKVISESLEASLLLHKYPARMFEIDVVILNANAGTRTAAINAASLACADAGIEMRDLVCSVAAGKAEDTVLLDLFQPEDNYGQADLPMAVLPNLGEISLIQMDGDLSLKEFDEGFDMILESAKELYEIQKKALMER 235
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: A0A2E4HNA0_9ARCH (Exosome complex exonuclease Rrp41 n=1 Tax=Thaumarchaeota archaeon TaxID=2026795 RepID=A0A2E4HNA0_9ARCH) HSP 1 Score: 77.8 bits (190), Expect = 1.440e-13 Identity = 56/206 (27.18%), Postives = 97/206 (47.09%), Query Frame = 2 Query: 113 GSSYVEMCGSSIACKFLSLRNVNKHRSYGNQMDNGYFECEVTYSKHITALGSHQCDNDDITRLR-RISQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSNEIVDACIDSLVGKCDQIRNLMSTNLLKRSMN 727 GS+ +E + I + V H + + D +C H+ + N ++R IS+++++AIQP++ ++ YP+ + + I +L+S CA INAAS+ALADA + MRDL A A + + + + + + L ILPNLG +L Q +G S E ++ C ++ L L+ + N Sbjct: 32 GSAIIEFGKNKIIAAVFGPKEV--HPKHMMRNDQAIIKCRY----HMMPFSTDTRKNPSLSRREIEISKVIREAIQPAIIMEDYPRTAIEVYIEILQSDGGSRCAAINAASVALADAGINMRDLITACAAGKADGKIILDVDDVEDKTGEADMPLSILPNLGTITLFQLDGCLSEEEFKQALEMATNGCKKLYELQRNALMNKYFN 231
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: A0A075HUV5_9ARCH (Exosome complex component Rrp41 n=2 Tax=Thaumarchaeota TaxID=651137 RepID=A0A075HUV5_9ARCH) HSP 1 Score: 77.0 bits (188), Expect = 2.840e-13 Identity = 54/207 (26.09%), Postives = 100/207 (48.31%), Query Frame = 2 Query: 113 GSSYVEMCGSSIACKFLSLRNVN-KHRSYGNQMDNGYFECEVTYSKHITALGSHQCDNDDITRLR-RISQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSNEIVDACIDSLVGKCDQIRNLMSTNLLKRSMN 727 GS+ +E + I + V+ KH N+ +C H+ + +++R IS+++++A+QP++ ++ YP+ + + + +L+S CA INAAS ALADA + MRDL A A +N + + + + + + +LPN L +L Q +G S E D ++ C+++ NL L ++ N Sbjct: 32 GSALIEFGKNKIIAAVFGPKEVHPKHMMVSNR---AIIKCRY----HMMPFSTDTRKRPNLSRREIEISKVIREAVQPAILMENYPRTAIEIYVEILQSDGGSRCAAINAASTALADAGINMRDLVAACAAGKVNGQVVLDVDDQEDKTGEADMPIAMLPNKDLITLFQLDGNLSKEEFDRALELAKIGCNKLYNLQKDALSEKYFN 231
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: A0A7J4DNQ6_9ARCH (Exosome complex component Rrp41 n=1 Tax=Nitrososphaerales archaeon TaxID=2268197 RepID=A0A7J4DNQ6_9ARCH) HSP 1 Score: 76.6 bits (187), Expect = 3.930e-13 Identity = 55/203 (27.09%), Postives = 97/203 (47.78%), Query Frame = 2 Query: 113 GSSYVEMCGSSIACKFLSLRNVNKHRSYGNQMDNGYFECEVTYSKHITALGSHQCDNDDITRLR-RISQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSNEIVDACIDSLVGKCDQIRNLMSTNLLKR 718 GS+ +E + I + V H + D +C H+ + +I+R IS+++++A+QP++ ++ YP+ + + I VL+S CA INAAS ALADA + MRDL A A ++ + + + + + + +LPN GL +L Q +G S E D ++ CD++ L L ++ Sbjct: 33 GSALIEFGKNKIMAAVFGPKEV--HPKHMMISDRAIIKCRY----HMMPFSTDTRKRPNISRREIEISKVIREALQPAIIMEDYPRTAIEIYIEVLQSDGGSRCAAINAASTALADAGINMRDLVTACAAGKVDGQVVLDVDDTEDKTGEADMPIALLPNTGLITLFQLDGNLSKEEFDKALELAKTGCDKLYKLQRDALSEK 229
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: A0A024GTI9_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTI9_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 4.640e-13 Identity = 64/221 (28.96%), Postives = 107/221 (48.42%), Query Frame = 2 Query: 89 TFSSIGV----SGSSYVEMCGSSIACKFLSLRNVNKHRSYGNQMDNGYFECEVTYS-----KHITALGSHQCDNDDITRLRRISQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSNEIVDACIDSLVGKCDQIRNLMSTNLLKRSM 724 T+ +G+ +GS+YVE+ G+ + C RN + R ++ +G C+V ++ H + G + D SQ+V A+ P+++LDK PK ++S +V+L+S DL A I AASLALADA +EM D+ A ++ + + E L ILP+L + V EG ++E ++ ++ C +N LK+ M Sbjct: 36 TYMQVGLIHNAAGSAYVELQGTKVICAVYGPRNDPRGRRTFHE--DGQLICDVKFAPFAEHNHSRSPGQGPDELD-------YSQIVTKALLPAIFLDKLPKCVVSCFVVILQSDGSDLAAAIMAASLALADAAIEMCDMVTACTAGIIDDKVVVDPCKSEEQRSQGNAMLAILPSLQKVTFVMQEGTITHEQLEDILNVCKVAC--------SNALKKRM 239
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: A0A3F2RG10_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RG10_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 4.700e-13 Identity = 60/209 (28.71%), Postives = 103/209 (49.28%), Query Frame = 2 Query: 104 GVSGSSYVEMCGSSIACKFLSLR-NVNKHRSYGNQMDNGYFECEVTYSKHITALGSHQCDNDDITRLRRISQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSN----EIVDACIDSLVGKCDQIRNLMSTNLLK 715 G +GS+YVE+ + + C R + R + N G C+V ++ AL + D +S +V++A+ P++ L K PK ++S+ + VL++ A IN ASLALADA VEM D+ A + +N + E D K+ L +P++G + + G+ + E VD C D+ G R+L++ +L++ Sbjct: 49 GAAGSAYVELGRTRVVCAVYGPRADTRPRREFSND---GQLVCDVKFAPFADALTRRERGQDPDEM--ELSAIVEEALAPAVMLHKLPKCVVSVFVTVLENDGGVFAAAINCASLALADAAVEMYDVVTAASAGIVNSTVVLDPSREEEQRGDGKLALAYMPSMGQVTYMLQAGQIHHTQLQEAVDLCTDACTGVT---RSLLTASLVQ 249
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Match: UPI00200B4533 (exosome complex exonuclease Rrp41 n=1 Tax=Methanobacterium alcaliphilum TaxID=392018 RepID=UPI00200B4533) HSP 1 Score: 76.3 bits (186), Expect = 5.350e-13 Identity = 57/202 (28.22%), Postives = 96/202 (47.52%), Query Frame = 2 Query: 113 GSSYVEMCGSSIACKFLSLRNVNKHRSYGNQMDNGYFECEVTYSKHITALGSHQCDNDDITRLRRISQLVQDAIQPSLYLDKYPKQLLSLSIVVLKSSSFDLCACINAASLALADALVEMRDLPCAFAIHHLNREKYPEKMSYYENIEDLKVTLCILPNLGLSSLVQTEGRSSNEIVDACIDSLVGKCDQIRNLMSTNLLKR 718 GS+Y+E G+ I R + R + D C Y+ ++ + D R IS++ +A+QPS+ L+KYP+ L+ + I VL++ CA I AAS+ALADA + M+D+ A A +N E + + V + I+P G +L+Q++G + E + +D + C +I + L R Sbjct: 40 GSAYLEFGGNKILVAVYGPRESHIRRL--QRPDRANIRCR--YNMAPFSVDDRKRPGPD-RRSVEISKITSEALQPSILLEKYPRSLIDIFIEVLEAEGGTRCAGITAASVALADAGIPMKDMVVACAAGKVNDEVVLDLSEVEDKDGQADVPVAIMPRSGEVTLLQSDGNLTTEEFEKALDLAIEGCQEISKIQKEALKNR 236 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9671.28460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9671.28460.1 >prot_D-dudresnayi_contig9671.28460.1 ID=prot_D-dudresnayi_contig9671.28460.1|Name=mRNA_D-dudresnayi_contig9671.28460.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=221bp MIFQVGTFSSIGVSGSSYVEMCGSSIACKFLSLRNVNKHRSYGNQMDNGYback to top mRNA from alignment at D-dudresnayi_contig9671:10590..11328+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9671.28460.1 ID=mRNA_D-dudresnayi_contig9671.28460.1|Name=mRNA_D-dudresnayi_contig9671.28460.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=739bp|location=Sequence derived from alignment at D-dudresnayi_contig9671:10590..11328+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9671:10590..11328+ >mRNA_D-dudresnayi_contig9671.28460.1 ID=mRNA_D-dudresnayi_contig9671.28460.1|Name=mRNA_D-dudresnayi_contig9671.28460.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1326bp|location=Sequence derived from alignment at D-dudresnayi_contig9671:10590..11328+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |