mRNA_D-dudresnayi_contig9671.28459.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9671.28459.1
Unique NamemRNA_D-dudresnayi_contig9671.28459.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A7S1HPI4_9EUKA (60S ribosomal protein L13 n=2 Tax=Prymnesiophyceae TaxID=2608131 RepID=A0A7S1HPI4_9EUKA)

HSP 1 Score: 398 bits (1023), Expect = 2.280e-139
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 2
Query:   23 MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEAKEEKKDE 643
            MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEAKEEKKDE
Sbjct:    1 MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEAKEEKKDE 207          
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A7S3HKM7_9STRA (60S ribosomal protein L13 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HKM7_9STRA)

HSP 1 Score: 352 bits (903), Expect = 4.200e-121
Identity = 176/206 (85.44%), Postives = 195/206 (94.66%), Query Frame = 2
Query:   23 MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEAKEEKKD 640
            MVKHNNVIPGQHFHKDWAKRVKTWF QP+QKKIRRD RKEKAAKNAPRP+SGSLRPLVHCPTQKYNSK+KLGRGFTLEELKAAGINR+FAQTVGI+VDHRRTNKCEESL+ NVDRLKSYKARLVIFPRRAG+ K GDSSAAEIAEA K+DV+I S+PK+ EAVTFT +TEE+KAA+GYA LR+ARTDARLVGIRKK K+AKE+K++
Sbjct:    1 MVKHNNVIPGQHFHKDWAKRVKTWFSQPIQKKIRRDRRKEKAAKNAPRPASGSLRPLVHCPTQKYNSKIKLGRGFTLEELKAAGINRQFAQTVGISVDHRRTNKCEESLNLNVDRLKSYKARLVIFPRRAGIIKKGDSSAAEIAEAHKLDVNIASLPKKEEAVTFTAITEELKAAKGYATLRQARTDARLVGIRKKQKDAKEKKEE 206          
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A812RHB8_SYMMI (60S ribosomal protein L13 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RHB8_SYMMI)

HSP 1 Score: 240 bits (612), Expect = 7.450e-77
Identity = 127/206 (61.65%), Postives = 156/206 (75.73%), Query Frame = 2
Query:   23 MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFT-TVTEEMKAAQGYAALRRARTDARLVGIRKKMKEAKEEKK 637
            MV+HNNV+P QHFHKDW +RVKTWF QP+QKK RR+ RK KAA+ APRP+SG LRPLV CPTQKY++KV+ GRGFTLEELK AGI  K AQT+GI+VDHRRTNK  ESL  NV RLK YK+RLV+FPR+    + GD+S  EIA+AQ++  +I + P    AVT    +T+EMKA + Y  LR AR DARL+G R   K +KE++K
Sbjct:    1 MVRHNNVVPNQHFHKDWDRRVKTWFHQPMQKKARREKRKIKAARLAPRPASGPLRPLVRCPTQKYSTKVRSGRGFTLEELKEAGIPAKLAQTIGISVDHRRTNKSVESLQLNVQRLKEYKSRLVVFPRKGNKPRAGDASKEEIAQAQQLKGEIVARPAAEPAVTLGGKITDEMKAFRAYGTLRAARNDARLLGKRITKKNSKEDEK 206          
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A7I4BRC6_PHYPA (60S ribosomal protein L13 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4BRC6_PHYPA)

HSP 1 Score: 218 bits (555), Expect = 4.230e-68
Identity = 116/211 (54.98%), Postives = 151/211 (71.56%), Query Frame = 2
Query:   11 LSFKMVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEA--KEEKK 637
            LS  MVKHNNVIP  HF KDW   V+TWF QP +KK RR  R++KAA   PRP++G LRP+VH  T +YN+K++ GRGFTL+ELKAAGI +K A T+GIAVDHRR N+C ESL  NV+RL +Y+A+LV+FPRRA   K GD++A E++ A ++   +  + K    V   +VT+EMK+ +GY  LR+ R + RLVG+RKK  E   KEEKK
Sbjct:    4 LSSTMVKHNNVIPNGHFKKDWQNYVRTWFNQPARKKRRRTARQKKAAAVFPRPTAGPLRPVVHSQTLRYNAKIRAGRGFTLDELKAAGIPKKLAPTIGIAVDHRRKNRCLESLQENVNRLNTYRAKLVVFPRRARKSKAGDATAEELSSATQVTRSVLPIVKPRPTVEIVSVTDEMKSQKGYYKLRQERMNERLVGVRKKKAEQAEKEEKK 214          
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A3S3QHW5_9MAGN (60S ribosomal protein L13 n=3 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3QHW5_9MAGN)

HSP 1 Score: 216 bits (549), Expect = 2.740e-67
Identity = 118/207 (57.00%), Postives = 144/207 (69.57%), Query Frame = 2
Query:   23 MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEAKEEKKDE 643
            MVKHNNVIP  HF K W   VKTWF QP +K  RR  R++KA K  PRP+SG LRP+VHC T KYN K++ GRGF+LEELKAAGI +K A T+GIAVDHRR N+  E L  NV RLK+YKA+LVIFPRR+G FKNGDSSA E+A A ++  D   + +    V    VT+EMKA + Y  LR  +T+ R  G R  +K+A E +KDE
Sbjct:    1 MVKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKVFPRPTSGPLRPVVHCQTLKYNMKLRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQNNVQRLKTYKAKLVIFPRRSGKFKNGDSSAEELASATQVHGDYMPITREKPVVELVKVTDEMKAFKAYQKLRLEQTNKRHHGAR--LKKAAEAEKDE 205          
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A836C9T6_9STRA (60S ribosomal protein L13 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T6_9STRA)

HSP 1 Score: 216 bits (549), Expect = 2.830e-67
Identity = 121/209 (57.89%), Postives = 149/209 (71.29%), Query Frame = 2
Query:   23 MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVF-KNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMK-EAKEEKKDE 643
            MVKHNNVIP  HFHK W  RVKTWF QP++KK RR  R  KAA  APRP+   LRP VHCPT KYN KV+LGRGFTL ELK AGI+RK A+T+GI+VDHRRTN+   ++  NV RLK Y+++L+IFPRR+    K GD++  + A A ++   +  + K   AV F  VT+EMKA + Y ALR AR+DARLVGIRKK   E K+ +KDE
Sbjct:    1 MVKHNNVIPNGHFHKKWQTRVKTWFDQPMKKKARRMRRAAKAAAVAPRPTQ-LLRPAVHCPTIKYNMKVRLGRGFTLAELKEAGISRKVARTIGISVDHRRTNRSLATMQNNVARLKEYQSKLIIFPRRSNAKPKAGDAAPGDTAAAAQVTGAVMPLTKAVPAVAFAAVTDEMKAFKAYEALRVARSDARLVGIRKKQAAEKKDAEKDE 208          
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A176VM06_MARPO (60S ribosomal protein L13 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VM06_MARPO)

HSP 1 Score: 215 bits (547), Expect = 5.680e-67
Identity = 115/207 (55.56%), Postives = 147/207 (71.01%), Query Frame = 2
Query:   23 MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEAKEEKKDE 643
            MVKHNNVIP  HF KDW   VKTWF QP +KK RR +R++KA    PRP++G+LRP+V   TQ+YN KV+ GRGFT EELKAAGI++K A T+GIAVDHRR NKC ESL  NV RL +YKA+LV+FPRR+   K GDS+A E+A   ++   +  +     AV    +T EMK A+ YA +R  R +ARLVG+RKK K A+ EK+++
Sbjct:    1 MVKHNNVIPNGHFKKDWQNYVKTWFNQPARKKRRRTVRQKKAVTIFPRPTAGALRPVVRSQTQRYNMKVRAGRGFTFEELKAAGISKKLAGTIGIAVDHRRKNKCLESLQANVQRLNTYKAKLVVFPRRSRKVKAGDSTAEELASVTQLQGPVLPIISERPAVELVPITAEMKNAKAYAKIRLERMNARLVGVRKK-KAAEAEKEEK 206          
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A2K1L9U4_PHYPA (60S ribosomal protein L13 n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L9U4_PHYPA)

HSP 1 Score: 216 bits (550), Expect = 1.980e-66
Identity = 115/210 (54.76%), Postives = 150/210 (71.43%), Query Frame = 2
Query:   14 SFKMVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEA--KEEKK 637
            S  MVKHNNVIP  HF KDW   V+TWF QP +KK RR  R++KAA   PRP++G LRP+VH  T +YN+K++ GRGFTL+ELKAAGI +K A T+GIAVDHRR N+C ESL  NV+RL +Y+A+LV+FPRRA   K GD++A E++ A ++   +  + K    V   +VT+EMK+ +GY  LR+ R + RLVG+RKK  E   KEEKK
Sbjct:   72 SSTMVKHNNVIPNGHFKKDWQNYVRTWFNQPARKKRRRTARQKKAAAVFPRPTAGPLRPVVHSQTLRYNAKIRAGRGFTLDELKAAGIPKKLAPTIGIAVDHRRKNRCLESLQENVNRLNTYRAKLVVFPRRARKSKAGDATAEELSSATQVTRSVLPIVKPRPTVEIVSVTDEMKSQKGYYKLRQERMNERLVGVRKKKAEQAEKEEKK 281          
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A0D6R217_ARACU (60S ribosomal protein L13 n=3 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R217_ARACU)

HSP 1 Score: 212 bits (540), Expect = 6.310e-66
Identity = 114/207 (55.07%), Postives = 145/207 (70.05%), Query Frame = 2
Query:   23 MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEAKEEKKDE 643
            MVKHNNV+P  HF K W + VKTWF QP +K  RR  R++KA K  PRP++G LRP+VHC TQ+YN KV+ GRGF+LEELKAAGI +K A T+GIAVDHRR N+  E L +NV RLK+YKA+LV+FPR A  FK GDS+A E+A A ++      + +   +V    VT+EMK+ + YA LR  R + R+VG R  MK A E +KDE
Sbjct:    1 MVKHNNVVPNGHFKKHWQRYVKTWFNQPARKARRRTARQKKAVKIFPRPTTGPLRPIVHCQTQRYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRTARKFKAGDSNAEELAAATQVQGTYMPIVQEKPSVELVKVTDEMKSFKAYAKLRVERMNKRMVGTR--MKRAAEAEKDE 205          
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A6P8I3C7_ACTTE (60S ribosomal protein L13 n=2 Tax=Actiniaria TaxID=6103 RepID=A0A6P8I3C7_ACTTE)

HSP 1 Score: 212 bits (539), Expect = 1.020e-65
Identity = 109/201 (54.23%), Postives = 144/201 (71.64%), Query Frame = 2
Query:   29 KHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEAKEE 631
            K NNVIP  HFHKDW + VKTWF QP +KK RR  RKEKA K APRP +G++RP+V CPT KYN+K++ GRGFTL+ELKAAGI RK AQT+GIAVDHRR N+  ESL  NV RLK YK++L+IFPR+AG  K GDS AA++  A ++  ++  + + +  +    +T+E K    +  +R  R++ARL+GIR+K  + K E
Sbjct:    4 KRNNVIPNAHFHKDWQRYVKTWFNQPGRKKRRRTARKEKAIKIAPRPVAGAIRPIVRCPTFKYNTKIRAGRGFTLDELKAAGIPRKVAQTIGIAVDHRRKNRSTESLQANVQRLKEYKSKLIIFPRKAGKPKQGDSEAADLENAVQLQGEVMPIQQPSVQIKARPITDEEKKFSVFKTMRIERSNARLIGIREKRAKEKAE 204          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1HPI4_9EUKA2.280e-139100.0060S ribosomal protein L13 n=2 Tax=Prymnesiophyceae... [more]
A0A7S3HKM7_9STRA4.200e-12185.4460S ribosomal protein L13 n=1 Tax=Spumella elongat... [more]
A0A812RHB8_SYMMI7.450e-7761.6560S ribosomal protein L13 n=1 Tax=Symbiodinium mic... [more]
A0A7I4BRC6_PHYPA4.230e-6854.9860S ribosomal protein L13 n=1 Tax=Physcomitrium pa... [more]
A0A3S3QHW5_9MAGN2.740e-6757.0060S ribosomal protein L13 n=3 Tax=Cinnamomum micra... [more]
A0A836C9T6_9STRA2.830e-6757.8960S ribosomal protein L13 n=2 Tax=Tribonema minus ... [more]
A0A176VM06_MARPO5.680e-6755.5660S ribosomal protein L13 n=2 Tax=Marchantia polym... [more]
A0A2K1L9U4_PHYPA1.980e-6654.7660S ribosomal protein L13 n=2 Tax=Physcomitrium pa... [more]
A0A0D6R217_ARACU6.310e-6655.0760S ribosomal protein L13 n=3 Tax=Araucariaceae Ta... [more]
A0A6P8I3C7_ACTTE1.020e-6554.2360S ribosomal protein L13 n=2 Tax=Actiniaria TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9671contigD-dudresnayi_contig9671:5868..6880 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score220.7
Seed ortholog evalue6.4e-55
Seed eggNOG ortholog3218.PP1S21_106V6.1
Preferred nameRPL13
KEGG koko:K02873
KEGG Pathwayko03010,map03010
KEGG ModuleM00177,M00179
EggNOG free text desc.Belongs to the eukaryotic ribosomal protein eL13 family
EggNOG OGs37NMZ@33090,3G8XH@35493,COG4352@1,KOG3295@2759
COG Functional cat.J
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Hectar predicted targeting categoryother localisation
Exons5
Model size748
Cds size624
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930919.3610513-UTR-D-dudresnayi_contig9671:5867..59691622930919.3610513-UTR-D-dudresnayi_contig9671:5867..5969Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9671 5868..5969 -
1690557965.4922614-UTR-D-dudresnayi_contig9671:5867..59691690557965.4922614-UTR-D-dudresnayi_contig9671:5867..5969Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9671 5868..5969 -
1622930919.4702673-UTR-D-dudresnayi_contig9671:6858..68801622930919.4702673-UTR-D-dudresnayi_contig9671:6858..6880Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9671 6859..6880 -
1690557965.5524879-UTR-D-dudresnayi_contig9671:6858..68801690557965.5524879-UTR-D-dudresnayi_contig9671:6858..6880Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9671 6859..6880 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930919.3756793-CDS-D-dudresnayi_contig9671:5969..60831622930919.3756793-CDS-D-dudresnayi_contig9671:5969..6083Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 5970..6083 -
1690557965.5048769-CDS-D-dudresnayi_contig9671:5969..60831690557965.5048769-CDS-D-dudresnayi_contig9671:5969..6083Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 5970..6083 -
1622930919.3923385-CDS-D-dudresnayi_contig9671:6151..64181622930919.3923385-CDS-D-dudresnayi_contig9671:6151..6418Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 6152..6418 -
1690557965.517587-CDS-D-dudresnayi_contig9671:6151..64181690557965.517587-CDS-D-dudresnayi_contig9671:6151..6418Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 6152..6418 -
1622930919.4105346-CDS-D-dudresnayi_contig9671:6487..65381622930919.4105346-CDS-D-dudresnayi_contig9671:6487..6538Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 6488..6538 -
1690557965.5263047-CDS-D-dudresnayi_contig9671:6487..65381690557965.5263047-CDS-D-dudresnayi_contig9671:6487..6538Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 6488..6538 -
1622930919.42956-CDS-D-dudresnayi_contig9671:6609..67821622930919.42956-CDS-D-dudresnayi_contig9671:6609..6782Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 6610..6782 -
1690557965.5349672-CDS-D-dudresnayi_contig9671:6609..67821690557965.5349672-CDS-D-dudresnayi_contig9671:6609..6782Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 6610..6782 -
1622930919.4495783-CDS-D-dudresnayi_contig9671:6839..68581622930919.4495783-CDS-D-dudresnayi_contig9671:6839..6858Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 6840..6858 -
1690557965.543746-CDS-D-dudresnayi_contig9671:6839..68581690557965.543746-CDS-D-dudresnayi_contig9671:6839..6858Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 6840..6858 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9671.28459.1prot_D-dudresnayi_contig9671.28459.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9671 5970..6858 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9671.28459.1

>prot_D-dudresnayi_contig9671.28459.1 ID=prot_D-dudresnayi_contig9671.28459.1|Name=mRNA_D-dudresnayi_contig9671.28459.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=208bp
MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPS
SGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHR
RTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKID
VDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEA
KEEKKDE*
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mRNA from alignment at D-dudresnayi_contig9671:5868..6880-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9671.28459.1 ID=mRNA_D-dudresnayi_contig9671.28459.1|Name=mRNA_D-dudresnayi_contig9671.28459.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1013bp|location=Sequence derived from alignment at D-dudresnayi_contig9671:5868..6880- (Desmarestia dudresnayi DdudBR16 monoicous)
GTGTTATTGATTGTCTTTTAAAATGGTGAAGCACAACAACGGTTCGTTTT ATCTTGTATTATATGTTTATTGCTGTAGCTAAAAATCTTTCTTTACAGTT ATCCCCGGCCAGCACTTCCACAAGGACTGGGCTAAGAGAGTGAAGACCTG GTTCGGTCAGCCCGTCCAGAAGAAGATCCGTCGTGATCTGAGAAAGGAGA AGGCTGCTAAGAATGCCCCTAGACCTTCTTCTGGATCTCTCAGACCTTTG GTTCACTGCCCAACCCAAAAAGTATAAAAACTTATAATGTTTAAACCATT GTGATGAATTTGTATAATCCTGTACTTAATTTTATTTTACAGTACAACTC CAAGGTGAAGCTTGGTAGAGGATTCACTCTTGAGGAGTTGAAGGTAAGTT TGTTTTAGATTACAATAACTTTGAATTATGTTTTATAATTTCATTACCGT TTCTTCTTTTAGGCTGCTGGTATCAACAGAAAGTTCGCTCAAACCGTTGG CATTGCTGTAGACCACAGAAGAACCAACAAGTGTGAGGAGTCCCTTAGCA CCAATGTTGACCGCCTTAAGAGTTACAAGGCTAGATTAGTCATTTTCCCC CGCCGCGCTGGTGTCTTCAAGAACGGTGACTCTTCTGCCGCCGAGATCGC CGAGGCCCAGAAGATTGACGTCGACATCACATCCATGCCCAAGAGAGCTG AAGCTGTTACTTTCACAACCGTCACTGAGGTAATTAACTTCACTATATTG TTATCTGCTAGAAAGATCTGAACAATTGTCATTTTATTTGTGAGTAGGAG ATGAAGGCTGCCCAGGGCTATGCTGCTCTGCGCCGCGCCAGAACTGATGC CCGCCTTGTTGGCATCAGAAAGAAAATGAAGGAGGCCAAGGAGGAGAAGA AGGACGAGTAAAGTACCGCGGAGTGATTATTTGAATTGCGGTGTCAGGCG TGACAATAGATAGTCTTGACTGTTCACCGTTGTACTTTCAATGACTAAGC AATACGCACGGGC
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9671:5868..6880-

>mRNA_D-dudresnayi_contig9671.28459.1 ID=mRNA_D-dudresnayi_contig9671.28459.1|Name=mRNA_D-dudresnayi_contig9671.28459.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1248bp|location=Sequence derived from alignment at D-dudresnayi_contig9671:5868..6880- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGTGAAGCACAACAACGATGGTGAAGCACAACAACGTTATCCCCGGCC
AGCACTTCCACAAGGACTGGGCTAAGAGAGTGAAGACCTGGTTCGGTCAG
CCCGTCCAGAAGAAGATCCGTCGTGATCTGAGAAAGGAGAAGGCTGCTAA
GAATGCCCCTAGACCTTCTTCTGGATCTCTCAGACCTTTGGTTCACTGCC
CAACCCAAAAATTATCCCCGGCCAGCACTTCCACAAGGACTGGGCTAAGA
GAGTGAAGACCTGGTTCGGTCAGCCCGTCCAGAAGAAGATCCGTCGTGAT
CTGAGAAAGGAGAAGGCTGCTAAGAATGCCCCTAGACCTTCTTCTGGATC
TCTCAGACCTTTGGTTCACTGCCCAACCCAAAAATACAACTCCAAGGTGA
AGCTTGGTAGAGGATTCACTCTTGAGGAGTTGAAGTACAACTCCAAGGTG
AAGCTTGGTAGAGGATTCACTCTTGAGGAGTTGAAGGCTGCTGGTATCAA
CAGAAAGTTCGCTCAAACCGTTGGCATTGCTGTAGACCACAGAAGAACCA
ACAAGTGTGAGGAGTCCCTTAGCACCAATGTTGACCGCCTTAAGAGTTAC
AAGGCTAGATTAGTCATTTTCCCCCGCCGCGCTGGTGTCTTCAAGAACGG
TGACTCTTCTGCCGCCGAGATCGCCGAGGCCCAGAAGATTGACGTCGACA
TCACATCCATGCCCAAGAGAGCTGAAGCTGTTACTTTCACAACCGTCACT
GAGGCTGCTGGTATCAACAGAAAGTTCGCTCAAACCGTTGGCATTGCTGT
AGACCACAGAAGAACCAACAAGTGTGAGGAGTCCCTTAGCACCAATGTTG
ACCGCCTTAAGAGTTACAAGGCTAGATTAGTCATTTTCCCCCGCCGCGCT
GGTGTCTTCAAGAACGGTGACTCTTCTGCCGCCGAGATCGCCGAGGCCCA
GAAGATTGACGTCGACATCACATCCATGCCCAAGAGAGCTGAAGCTGTTA
CTTTCACAACCGTCACTGAGGAGATGAAGGCTGCCCAGGGCTATGCTGCT
CTGCGCCGCGCCAGAACTGATGCCCGCCTTGTTGGCATCAGAAAGAAAAT
GAAGGAGGCCAAGGAGGAGAAGAAGGACGAGTAAGAGATGAAGGCTGCCC
AGGGCTATGCTGCTCTGCGCCGCGCCAGAACTGATGCCCGCCTTGTTGGC
ATCAGAAAGAAAATGAAGGAGGCCAAGGAGGAGAAGAAGGACGAGTAA
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