mRNA_D-dudresnayi_contig9671.28458.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9671.28458.1
Unique NamemRNA_D-dudresnayi_contig9671.28458.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig9671.28458.1 vs. uniprot
Match: A0A812XPP9_SYMMI (PBC1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XPP9_SYMMI)

HSP 1 Score: 327 bits (839), Expect = 2.360e-111
Identity = 157/191 (82.20%), Postives = 172/191 (90.05%), Query Frame = 3
Query:   96 MAGKNCVGICSDLRLGQQAQTVAMDFEKVFPINDKLYIGLTGLASDVLSVNHLLNFRCNLYKLRENREIKPEAFSAMLSSLLYEKRFGPWFTEPVVAGLTDEGKPFLSGMDLIGAPVFANDFVVSGTCTSNLHGMCESLYRPDMSPDELFEVLSQSLLAAVDRDALSGWGAVVHIITPEGVTTRKLKCRQD 668
            MAGKNCVGICSD RLG QAQTVA DF+KVF ++DK+Y+GL GLA+DV+S++ LL FRCNLY+ RE+REIKPE FSA+LS+LLYEKRFGPWF EP+VAGLTD+ KPFLSGMDLIGAPVF  DFVVSGTCTSNLHGMCESLYRPDM PDELFEVLSQ LLAAVDRDALSGWGA V IITPEGV TRKLK RQD
Sbjct:    1 MAGKNCVGICSDTRLGVQAQTVAKDFKKVFEMSDKVYVGLAGLATDVISLHQLLQFRCNLYRFREHREIKPETFSALLSTLLYEKRFGPWFCEPIVAGLTDDNKPFLSGMDLIGAPVFTEDFVVSGTCTSNLHGMCESLYRPDMEPDELFEVLSQCLLAAVDRDALSGWGAEVIIITPEGVHTRKLKVRQD 191          
BLAST of mRNA_D-dudresnayi_contig9671.28458.1 vs. uniprot
Match: A0A6V1UZ14_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UZ14_HETAK)

HSP 1 Score: 313 bits (803), Expect = 1.110e-105
Identity = 147/204 (72.06%), Postives = 175/204 (85.78%), Query Frame = 3
Query:   57 MSILQYNGGAVIAMAGKNCVGICSDLRLGQQAQTVAMDFEKVFPINDKLYIGLTGLASDVLSVNHLLNFRCNLYKLRENREIKPEAFSAMLSSLLYEKRFGPWFTEPVVAGLTDEGKPFLSGMDLIGAPVFANDFVVSGTCTSNLHGMCESLYRPDMSPDELFEVLSQSLLAAVDRDALSGWGAVVHIITPEGVTTRKLKCRQD 668
            MSIL+YNGGA IAM GKNCVGICSDLRLG+Q +TVAMDF K F +NDKL++GLTGLA+DV ++  LL F+ N+YKLRE RE+K E FSAML++ LYE+RFGP+F EPVVAGL D+  PF+S MDLIGAPV  +DFVV+GTCT+NL+GMCES Y+P+M PDELFE +SQ LLA+VDRDALSGWGAVVHIITPEGVT++ LK R D
Sbjct:    1 MSILEYNGGACIAMTGKNCVGICSDLRLGEQIKTVAMDFPKCFKLNDKLFVGLTGLATDVQTLTQLLRFKLNMYKLREEREMKVETFSAMLTNTLYERRFGPYFVEPVVAGLKDDNTPFISAMDLIGAPVLTSDFVVAGTCTNNLYGMCESFYKPEMEPDELFETMSQCLLASVDRDALSGWGAVVHIITPEGVTSKTLKGRMD 204          
BLAST of mRNA_D-dudresnayi_contig9671.28458.1 vs. uniprot
Match: A0A7S2XNS4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNS4_9STRA)

HSP 1 Score: 311 bits (798), Expect = 6.420e-105
Identity = 147/204 (72.06%), Postives = 179/204 (87.75%), Query Frame = 3
Query:   57 MSILQYNGGAVIAMAGKNCVGICSDLRLGQQAQTVAMDFEKVFPINDKLYIGLTGLASDVLSVNHLLNFRCNLYKLRENREIKPEAFSAMLSSLLYEKRFGPWFTEPVVAGLTDEGKPFLSGMDLIGAPVFANDFVVSGTCTSNLHGMCESLYRPDMSPDELFEVLSQSLLAAVDRDALSGWGAVVHIITPEGVTTRKLKCRQD 668
            MSIL+YNG A+IAMAGK+CVGI +D RLG QAQTVA DF+KVF +ND+L+ GL GLASDV +++ LL FR NLY+LRE RE+ PE FS +LS+LLYEKRFGP+F EP+VAGL ++GKPFLSGMDLIGAPV+ +DFVVSGTCT N++GMCE+LY+PDM PD+LFE L+Q+LLA+VDRDALSGWG VVHIIT +GVT+R+LK RQD
Sbjct:    1 MSILEYNGAAIIAMAGKDCVGIAADTRLGVQAQTVATDFKKVFKMNDRLFCGLAGLASDVQTLDQLLKFRQNLYELREEREMTPEVFSNLLSTLLYEKRFGPYFVEPIVAGLDNKGKPFLSGMDLIGAPVYTDDFVVSGTCTGNMYGMCETLYKPDMEPDQLFETLAQALLASVDRDALSGWGGVVHIITKDGVTSRELKGRQD 204          
BLAST of mRNA_D-dudresnayi_contig9671.28458.1 vs. uniprot
Match: A0A7S2FDP8_9STRA (Proteasome subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FDP8_9STRA)

HSP 1 Score: 311 bits (796), Expect = 3.650e-104
Identity = 144/204 (70.59%), Postives = 176/204 (86.27%), Query Frame = 3
Query:   57 MSILQYNGGAVIAMAGKNCVGICSDLRLGQQAQTVAMDFEKVFPINDKLYIGLTGLASDVLSVNHLLNFRCNLYKLRENREIKPEAFSAMLSSLLYEKRFGPWFTEPVVAGLTDEGKPFLSGMDLIGAPVFANDFVVSGTCTSNLHGMCESLYRPDMSPDELFEVLSQSLLAAVDRDALSGWGAVVHIITPEGVTTRKLKCRQD 668
            MSIL+YNGGA+IAM GKNCV I  D RLG Q QTV+ DF+K+F +NDKL +G+TGLA+DVL++  LL F+ N+YKLRE RE+KPE FS +L+S+LYEKRFGP+FTEPVVAGL ++ +PFLS MDLIGAPV   DFVVSGTCT+NL+GMCE++YRPDM PD+LFE +SQ LLA+VDRDALSGWGA+VH+ITPEG T+R+LK RQD
Sbjct:   31 MSILEYNGGAIIAMTGKNCVAIACDTRLGLQQQTVSCDFQKIFKMNDKLMLGVTGLATDVLTLQQLLKFKLNMYKLREEREMKPETFSWLLTSVLYEKRFGPYFTEPVVAGLNEKNEPFLSAMDLIGAPVMTKDFVVSGTCTANLNGMCETMYRPDMEPDDLFETISQCLLASVDRDALSGWGAMVHVITPEGTTSRRLKGRQD 234          
BLAST of mRNA_D-dudresnayi_contig9671.28458.1 vs. uniprot
Match: A0A6U1MII2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MII2_9STRA)

HSP 1 Score: 310 bits (793), Expect = 3.700e-104
Identity = 144/204 (70.59%), Postives = 174/204 (85.29%), Query Frame = 3
Query:   57 MSILQYNGGAVIAMAGKNCVGICSDLRLGQQAQTVAMDFEKVFPINDKLYIGLTGLASDVLSVNHLLNFRCNLYKLRENREIKPEAFSAMLSSLLYEKRFGPWFTEPVVAGLTDEGKPFLSGMDLIGAPVFANDFVVSGTCTSNLHGMCESLYRPDMSPDELFEVLSQSLLAAVDRDALSGWGAVVHIITPEGVTTRKLKCRQD 668
            MSI++YNGGA IAMAGKNCVGICSDLRLG QAQTVA DF KVF +ND+L++GLTGLA+D+ ++  LL FR N+YKL+E RE++PE FSAM+SS+LYEKRFGP+F EP++AGL D+  PFLS MDLIG     +DFVV+GTCT NL+GMCESLYRPD  PDELFE LSQ LL++VDRDA+SGWGAVVHIITP+G+T++ LK R D
Sbjct:    1 MSIMEYNGGACIAMAGKNCVGICSDLRLGMQAQTVATDFPKVFKMNDRLFLGLTGLATDIQTMQQLLKFRLNMYKLKEEREMRPEVFSAMMSSVLYEKRFGPYFVEPIIAGLKDDNTPFLSTMDLIGCESKTDDFVVAGTCTPNLYGMCESLYRPDQGPDELFETLSQCLLSSVDRDAVSGWGAVVHIITPDGITSKMLKGRMD 204          
BLAST of mRNA_D-dudresnayi_contig9671.28458.1 vs. uniprot
Match: A0A835ZI80_9STRA (Nucleophile aminohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI80_9STRA)

HSP 1 Score: 308 bits (789), Expect = 1.500e-103
Identity = 144/204 (70.59%), Postives = 175/204 (85.78%), Query Frame = 3
Query:   57 MSILQYNGGAVIAMAGKNCVGICSDLRLGQQAQTVAMDFEKVFPINDKLYIGLTGLASDVLSVNHLLNFRCNLYKLRENREIKPEAFSAMLSSLLYEKRFGPWFTEPVVAGLTDEGKPFLSGMDLIGAPVFANDFVVSGTCTSNLHGMCESLYRPDMSPDELFEVLSQSLLAAVDRDALSGWGAVVHIITPEGVTTRKLKCRQD 668
            MSIL YNGG +IAM GK CVGI SD RLG QAQTVA DF+K+F + D++ +GLTGLA+DV ++  LL F+ N+YKLRE R++KP+ FSA+LS+ LYE+RFGP+FTEPVVAGL ++GKPFLS MDLIGAPVF +DFVV+GT T NL+GMCE+LYRPDM+ +ELFE LSQ+LLA+VDRDALSGWG VVHII P GVTT++LKCRQD
Sbjct:    1 MSILSYNGGDIIAMTGKGCVGIASDTRLGNQAQTVACDFQKIFRMTDRIMLGLTGLATDVQTLQQLLTFKINMYKLREERDMKPKTFSALLSTTLYERRFGPYFTEPVVAGLDEDGKPFLSAMDLIGAPVFTDDFVVAGTSTENLYGMCETLYRPDMNEEELFETLSQALLASVDRDALSGWGGVVHIIGPNGVTTKQLKCRQD 204          
BLAST of mRNA_D-dudresnayi_contig9671.28458.1 vs. uniprot
Match: A0A4D9CN71_9STRA (Proteasome subunit beta n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CN71_9STRA)

HSP 1 Score: 305 bits (780), Expect = 3.630e-102
Identity = 143/205 (69.76%), Postives = 177/205 (86.34%), Query Frame = 3
Query:   57 MSILQYNGGAVIAMAGKNCVGICSDLRLGQQAQTVAMDFEKVFPINDKLYIGLTGLASDVLSVNHLLNFRCNLYKLRENREIKPEAFSAMLSSLLYEKRFGPWFTEPVVAGL-TDEGKPFLSGMDLIGAPVFANDFVVSGTCTSNLHGMCESLYRPDMSPDELFEVLSQSLLAAVDRDALSGWGAVVHIITPEGVTTRKLKCRQD 668
            MSIL+YNGGAV+AM GKNCV I SDLR G QAQTVA +F KV  ++D+L++GL+GLA+D+ ++  LL FR NLYKLRE R+IKPE FSA+LS +LYEKRFGP+F EP+VAGL  ++  PF+SGMDLIGAPVFA DFVV+GTC +NL+G+CES ++PD+ P++LFEVLSQSLLA+VDRDALSGWGAVVH+ITP+GVT+R LK RQD
Sbjct:    1 MSILEYNGGAVVAMVGKNCVAIASDLRYGVQAQTVACNFPKVHKMSDRLFVGLSGLATDIQTLEQLLRFRLNLYKLREERDIKPETFSALLSHILYEKRFGPYFVEPLVAGLRAEDNTPFISGMDLIGAPVFAKDFVVAGTCAANLYGLCESFFKPDLEPEQLFEVLSQSLLASVDRDALSGWGAVVHVITPDGVTSRTLKARQD 205          
BLAST of mRNA_D-dudresnayi_contig9671.28458.1 vs. uniprot
Match: D7FY33_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY33_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 7.070e-102
Identity = 140/204 (68.63%), Postives = 169/204 (82.84%), Query Frame = 3
Query:   57 MSILQYNGGAVIAMAGKNCVGICSDLRLGQQAQTVAMDFEKVFPINDKLYIGLTGLASDVLSVNHLLNFRCNLYKLRENREIKPEAFSAMLSSLLYEKRFGPWFTEPVVAGLTDEGKPFLSGMDLIGAPVFANDFVVSGTCTSNLHGMCESLYRPDMSPDELFEVLSQSLLAAVDRDALSGWGAVVHIITPEGVTTRKLKCRQD 668
            MSIL+YNG A++AM GKNCVGICSD RLG QAQTVA DFEK+F + DKL +GL GLA+DV+++  LL FR NLY+LRE REIKPE FSA++S +LY+KRFGP+F EP+VAGL ++  PF+S  DLIGAPV  +DFVV GTCT+NL+GMCES YRPDM  DELFE ++Q LL +VDRDALSGWG VVHIITPEG+ ++ LK RQD
Sbjct:    1 MSILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDKLMVGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLKEDNTPFISAFDLIGAPVVTDDFVVGGTCTNNLYGMCESFYRPDMDKDELFETMAQCLLTSVDRDALSGWGGVVHIITPEGIMSKTLKGRQD 204          
BLAST of mRNA_D-dudresnayi_contig9671.28458.1 vs. uniprot
Match: A0A6U4EA60_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4EA60_9STRA)

HSP 1 Score: 303 bits (775), Expect = 2.020e-101
Identity = 143/204 (70.10%), Postives = 171/204 (83.82%), Query Frame = 3
Query:   57 MSILQYNGGAVIAMAGKNCVGICSDLRLGQQAQTVAMDFEKVFPINDKLYIGLTGLASDVLSVNHLLNFRCNLYKLRENREIKPEAFSAMLSSLLYEKRFGPWFTEPVVAGLTDEGKPFLSGMDLIGAPVFANDFVVSGTCTSNLHGMCESLYRPDMSPDELFEVLSQSLLAAVDRDALSGWGAVVHIITPEGVTTRKLKCRQD 668
            MSIL+YNGGA+IAM GK+CVGI +D RLG QAQT+A DF+KVF +ND+L++GL GL +DV ++ +LL FR NLYKLRE REI P+AFSAMLSS+LYEKRFGP+F EP+V GL  +G  FLS MDLIGAPVF +DFVV GTCT+NL+GMCESLYRPDM  DELFE L+Q L A+VDRDA+SGWG  VH+ITPEGV ++ LK RQD
Sbjct:    1 MSILEYNGGAMIAMVGKDCVGIAADTRLGAQAQTIATDFKKVFQLNDRLFVGLAGLGTDVQTLRNLLKFRLNLYKLREEREITPKAFSAMLSSILYEKRFGPYFVEPMVCGLNADGSAFLSAMDLIGAPVFTDDFVVQGTCTNNLYGMCESLYRPDMDKDELFETLAQCLQASVDRDAVSGWGGEVHVITPEGVYSKTLKSRQD 204          
BLAST of mRNA_D-dudresnayi_contig9671.28458.1 vs. uniprot
Match: A0A7S1FMY7_9STRA (Proteasome subunit beta n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FMY7_9STRA)

HSP 1 Score: 302 bits (773), Expect = 4.070e-101
Identity = 141/204 (69.12%), Postives = 177/204 (86.76%), Query Frame = 3
Query:   57 MSILQYNGGAVIAMAGKNCVGICSDLRLGQQAQTVAMDFEKVFPINDKLYIGLTGLASDVLSVNHLLNFRCNLYKLRENREIKPEAFSAMLSSLLYEKRFGPWFTEPVVAGLTDEGKPFLSGMDLIGAPVFANDFVVSGTCTSNLHGMCESLYRPDMSPDELFEVLSQSLLAAVDRDALSGWGAVVHIITPEGVTTRKLKCRQD 668
            MSIL+YNGGA+IAMAGK+CV I SD RLG   QTVA DF+KVF +N++LY+GL GLA+DV +++ LL FR  LY+LRE R++KP+ FS +LS++LYEKRFGP+F EPVVAGL ++ KPFLSGMDLIGA V A+DFVV+GTCT NL+GMCE+LY+PD+ P+ELFE +SQ LL+AVDRDA+SGWGAVVH+ITP+GVT+R+LK RQD
Sbjct:    1 MSILEYNGGAIIAMAGKDCVAIASDTRLGINMQTVATDFKKVFKMNERLYVGLAGLATDVQTLDQLLRFRSELYELREERKMKPKTFSNLLSTMLYEKRFGPYFCEPVVAGLDEKNKPFLSGMDLIGATVIADDFVVTGTCTENLYGMCETLYKPDLGPEELFETISQCLLSAVDRDAMSGWGAVVHVITPKGVTSRELKGRQD 204          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9671.28458.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812XPP9_SYMMI2.360e-11182.20PBC1 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A6V1UZ14_HETAK1.110e-10572.06Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XNS4_9STRA6.420e-10572.06Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2FDP8_9STRA3.650e-10470.59Proteasome subunit beta n=1 Tax=Florenciella parvu... [more]
A0A6U1MII2_9STRA3.700e-10470.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZI80_9STRA1.500e-10370.59Nucleophile aminohydrolase n=1 Tax=Tribonema minus... [more]
A0A4D9CN71_9STRA3.630e-10269.76Proteasome subunit beta n=1 Tax=Nannochloropsis sa... [more]
D7FY33_ECTSI7.070e-10268.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6U4EA60_9STRA2.020e-10170.10Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1FMY7_9STRA4.070e-10169.12Proteasome subunit beta n=2 Tax=Corethron hystrix ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9671contigD-dudresnayi_contig9671:4662..5789 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score305.1
Seed ortholog evalue2.5e-80
Seed eggNOG ortholog2880.D7FY33
Preferred namePBC1
KEGG koko:K02735,ko:K03660
KEGG Pathwayko03050,ko03410,map03050,map03410
KEGG ModuleM00337,M00340
GOsGO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005839,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0016020,GO:0019538,GO:0019774,GO:0031090,GO:0032991,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0098588,GO:0098805,GO:1901564,GO:1902494,GO:1905368,GO:1905369
EggNOG free text desc.threonine-type endopeptidase activity
EggNOG OGsCOG0638@1,KOG0180@2759
EC3.4.25.1,4.2.99.18
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051,ko03400
Hectar predicted targeting categoryother localisation
Exons6
Model size791
Cds size615
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9671.28458.1prot_D-dudresnayi_contig9671.28458.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9671 4718..5669 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930919.123453-UTR-D-dudresnayi_contig9671:4661..47171622930919.123453-UTR-D-dudresnayi_contig9671:4661..4717Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9671 4662..4717 +
1690557965.3813374-UTR-D-dudresnayi_contig9671:4661..47171690557965.3813374-UTR-D-dudresnayi_contig9671:4661..4717Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9671 4662..4717 +
1622930919.310547-UTR-D-dudresnayi_contig9671:5669..57891622930919.310547-UTR-D-dudresnayi_contig9671:5669..5789Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9671 5670..5789 +
1690557965.4814355-UTR-D-dudresnayi_contig9671:5669..57891690557965.4814355-UTR-D-dudresnayi_contig9671:5669..5789Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9671 5670..5789 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930919.1441581-CDS-D-dudresnayi_contig9671:4717..47201622930919.1441581-CDS-D-dudresnayi_contig9671:4717..4720Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 4718..4720 +
1690557965.396648-CDS-D-dudresnayi_contig9671:4717..47201690557965.396648-CDS-D-dudresnayi_contig9671:4717..4720Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 4718..4720 +
1622930919.1572561-CDS-D-dudresnayi_contig9671:4795..48631622930919.1572561-CDS-D-dudresnayi_contig9671:4795..4863Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 4796..4863 +
1690557965.4084084-CDS-D-dudresnayi_contig9671:4795..48631690557965.4084084-CDS-D-dudresnayi_contig9671:4795..4863Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 4796..4863 +
1622930919.1714497-CDS-D-dudresnayi_contig9671:4927..51521622930919.1714497-CDS-D-dudresnayi_contig9671:4927..5152Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 4928..5152 +
1690557965.4283288-CDS-D-dudresnayi_contig9671:4927..51521690557965.4283288-CDS-D-dudresnayi_contig9671:4927..5152Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 4928..5152 +
1622930919.253853-CDS-D-dudresnayi_contig9671:5211..53861622930919.253853-CDS-D-dudresnayi_contig9671:5211..5386Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 5212..5386 +
1690557965.4439535-CDS-D-dudresnayi_contig9671:5211..53861690557965.4439535-CDS-D-dudresnayi_contig9671:5211..5386Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 5212..5386 +
1622930919.2726758-CDS-D-dudresnayi_contig9671:5456..55511622930919.2726758-CDS-D-dudresnayi_contig9671:5456..5551Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 5457..5551 +
1690557965.4543772-CDS-D-dudresnayi_contig9671:5456..55511690557965.4543772-CDS-D-dudresnayi_contig9671:5456..5551Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 5457..5551 +
1622930919.2935064-CDS-D-dudresnayi_contig9671:5620..56691622930919.2935064-CDS-D-dudresnayi_contig9671:5620..5669Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 5621..5669 +
1690557965.4705222-CDS-D-dudresnayi_contig9671:5620..56691690557965.4705222-CDS-D-dudresnayi_contig9671:5620..5669Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9671 5621..5669 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9671.28458.1

>prot_D-dudresnayi_contig9671.28458.1 ID=prot_D-dudresnayi_contig9671.28458.1|Name=mRNA_D-dudresnayi_contig9671.28458.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=205bp
MSILQYNGGAVIAMAGKNCVGICSDLRLGQQAQTVAMDFEKVFPINDKLY
IGLTGLASDVLSVNHLLNFRCNLYKLRENREIKPEAFSAMLSSLLYEKRF
GPWFTEPVVAGLTDEGKPFLSGMDLIGAPVFANDFVVSGTCTSNLHGMCE
SLYRPDMSPDELFEVLSQSLLAAVDRDALSGWGAVVHIITPEGVTTRKLK
CRQD*
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mRNA from alignment at D-dudresnayi_contig9671:4662..5789+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9671.28458.1 ID=mRNA_D-dudresnayi_contig9671.28458.1|Name=mRNA_D-dudresnayi_contig9671.28458.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1128bp|location=Sequence derived from alignment at D-dudresnayi_contig9671:4662..5789+ (Desmarestia dudresnayi DdudBR16 monoicous)
CTGGAATCCATTCTTTCTTTGAACTTAGTTTGGGTTATAATCTTTAATTA TTCATCATGGTAGGAAATATGTATTTCATTGATCATTACTATCGAATCGT ATATGTTAATAATTTGTTCTCTGTAATTGATCAGTCAATTCTTCAGTATA ATGGTGGCGCTGTTATTGCAATGGCTGGAAAGAATTGCGTTGGAATATGC AGGTATTAATTTTAACTTTAATAAATCATATTTCTATATTAATAATAAAT TGTTTGTCAAAATTAGTGATTTACGATTGGGCCAGCAAGCACAAACCGTA GCAATGGATTTTGAAAAAGTTTTTCCTATCAACGACAAGCTTTACATCGG TTTAACAGGACTTGCATCGGATGTATTATCTGTTAACCATCTTCTTAATT TTCGATGCAATCTATATAAGTTGCGAGAGAATAGAGAGATAAAACCAGAG GCTTTTTCTGCAATGCTGTCATCACTTCTTTATGAAAAACGGTATTTTTT GTTTGCATTAAATTTCAGCTATAGTTCTCTTATACAGCTGTTTTATATAG ATTTGGGCCATGGTTTACTGAACCTGTGGTTGCTGGATTAACTGACGAAG GAAAACCATTTTTATCCGGAATGGACCTGATCGGAGCACCTGTGTTTGCT AATGATTTCGTTGTCTCTGGTACATGTACATCAAACCTGCATGGCATGTG TGAGTCTCTTTATCGCCCAGATATGGTATGTATGCATTCTTTATATATTC ATATTTTTTCTGATTATTTATTGTCCATTTGTTGTTATATCTCAGTCTCC AGATGAGCTTTTCGAAGTACTCTCCCAGAGTTTACTTGCCGCAGTAGACC GCGATGCGTTGAGTGGATGGGGAGCTGTTGTACATATTATGTAAGATTTG AGTGCCTTCTTCCAATCATTTCATCAATGCTAACTTTCTTTCATGGTGTT TCGCTTCAGCACTCCTGAGGGCGTGACGACAAGGAAGCTCAAGTGCCGTC AAGATTAATCACTATAATATGTAAGGAGGATTCCCATTCATCACTGTAGA GTCGTCATGTTCCAAAGGAGTGTGTTGATATGAACCTTGAATGTAATATA ATTAATACAGTGCTGGTCTGTGTAATTA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9671:4662..5789+

>mRNA_D-dudresnayi_contig9671.28458.1 ID=mRNA_D-dudresnayi_contig9671.28458.1|Name=mRNA_D-dudresnayi_contig9671.28458.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1230bp|location=Sequence derived from alignment at D-dudresnayi_contig9671:4662..5789+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGATGTCAATTCTTCAGTATAATGGTGGCGCTGTTATTGCAATGGCTGG
AAAGAATTGCGTTGGAATATGCAGTCAATTCTTCAGTATAATGGTGGCGC
TGTTATTGCAATGGCTGGAAAGAATTGCGTTGGAATATGCAGTGATTTAC
GATTGGGCCAGCAAGCACAAACCGTAGCAATGGATTTTGAAAAAGTTTTT
CCTATCAACGACAAGCTTTACATCGGTTTAACAGGACTTGCATCGGATGT
ATTATCTGTTAACCATCTTCTTAATTTTCGATGCAATCTATATAAGTTGC
GAGAGAATAGAGAGATAAAACCAGAGGCTTTTTCTGCAATGCTGTCATCA
CTTCTTTATGAAAAACGTGATTTACGATTGGGCCAGCAAGCACAAACCGT
AGCAATGGATTTTGAAAAAGTTTTTCCTATCAACGACAAGCTTTACATCG
GTTTAACAGGACTTGCATCGGATGTATTATCTGTTAACCATCTTCTTAAT
TTTCGATGCAATCTATATAAGTTGCGAGAGAATAGAGAGATAAAACCAGA
GGCTTTTTCTGCAATGCTGTCATCACTTCTTTATGAAAAACGATTTGGGC
CATGGTTTACTGAACCTGTGGTTGCTGGATTAACTGACGAAGGAAAACCA
TTTTTATCCGGAATGGACCTGATCGGAGCACCTGTGTTTGCTAATGATTT
CGTTGTCTCTGGTACATGTACATCAAACCTGCATGGCATGTGTGAGTCTC
TTTATCGCCCAGATATGATTTGGGCCATGGTTTACTGAACCTGTGGTTGC
TGGATTAACTGACGAAGGAAAACCATTTTTATCCGGAATGGACCTGATCG
GAGCACCTGTGTTTGCTAATGATTTCGTTGTCTCTGGTACATGTACATCA
AACCTGCATGGCATGTGTGAGTCTCTTTATCGCCCAGATATGTCTCCAGA
TGAGCTTTTCGAAGTACTCTCCCAGAGTTTACTTGCCGCAGTAGACCGCG
ATGCGTTGAGTGGATGGGGAGCTGTTGTACATATTATTCTCCAGATGAGC
TTTTCGAAGTACTCTCCCAGAGTTTACTTGCCGCAGTAGACCGCGATGCG
TTGAGTGGATGGGGAGCTGTTGTACATATTATCACTCCTGAGGGCGTGAC
GACAAGGAAGCTCAAGTGCCGTCAAGATTAACACTCCTGAGGGCGTGACG
ACAAGGAAGCTCAAGTGCCGTCAAGATTAA
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