mRNA_D-dudresnayi_contig9666.28451.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9666.28451.1
Unique NamemRNA_D-dudresnayi_contig9666.28451.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig9666.28451.1 vs. uniprot
Match: A0A6H5KX02_9PHAE (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX02_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 1.390e-51
Identity = 81/88 (92.05%), Postives = 83/88 (94.32%), Query Frame = 1 
Query:   19 FLPDGQVFDASNAPGRKPIAFKLGARQVIKGWEEVLLLMNAGAEVQMVVPASMAFGDKGICIDNGDCLVKPGMDVRYDLQLKRVAVSP 282
            FLPDG VFDASNAPGRKPIAF+LG RQVIKGWEEVL LMNAGAEVQMVVPA MAFGDKGICIDNGDCLVKPGMDVRYDLQLKRVA +P
Sbjct:  124 FLPDGAVFDASNAPGRKPIAFQLGKRQVIKGWEEVLRLMNAGAEVQMVVPADMAFGDKGICIDNGDCLVKPGMDVRYDLQLKRVAPTP 211
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BLAST of mRNA_D-dudresnayi_contig9666.28451.1 vs. uniprot
Match: A0A6S9M8W0_HETAK (Peptidylprolyl isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M8W0_HETAK)

HSP 1 Score: 135 bits (341), Expect = 1.670e-38
Identity = 58/88 (65.91%), Postives = 76/88 (86.36%), Query Frame = 1 
Query:   19 FLPDGQVFDASNAPGRKPIAFKLGARQVIKGWEEVLLLMNAGAEVQMVVPASMAFGDKGICIDNGDCLVKPGMDVRYDLQLKRVAVSP 282
            +LPD  VFD+S+APGRKP+AFKLGARQVI GWEEVL  M+ GAEVQ VVPA +A+G KG+C+D+G+CL+KP  D+++D++LKRVA+ P
Sbjct:  102 YLPDNTVFDSSDAPGRKPLAFKLGARQVIPGWEEVLPYMSVGAEVQAVVPAKLAYGSKGVCLDSGECLIKPDTDLKFDIKLKRVAIPP 189
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BLAST of mRNA_D-dudresnayi_contig9666.28451.1 vs. uniprot
Match: A0A7S2UZW0_9STRA (Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZW0_9STRA)

HSP 1 Score: 126 bits (317), Expect = 6.980e-35
Identity = 54/88 (61.36%), Postives = 72/88 (81.82%), Query Frame = 1 
Query:   19 FLPDGQVFDASNAPGRKPIAFKLGARQVIKGWEEVLLLMNAGAEVQMVVPASMAFGDKGICIDNGDCLVKPGMDVRYDLQLKRVAVSP 282
            +L DG++FD+S  PGRKP+AFK G +QVI GWEEVL  M AG EV+MVVPAS+A+G KGIC+++G+CL++P  +++YDL LKRVA  P
Sbjct:  101 YLSDGRIFDSSTGPGRKPLAFKFGGKQVIPGWEEVLPYMKAGGEVKMVVPASLAYGSKGICVEDGECLIQPDEELKYDLTLKRVAPPP 188
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BLAST of mRNA_D-dudresnayi_contig9666.28451.1 vs. uniprot
Match: W7U710_9STRA (Peptidylprolyl isomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U710_9STRA)

HSP 1 Score: 115 bits (288), Expect = 3.320e-30
Identity = 51/87 (58.62%), Postives = 68/87 (78.16%), Query Frame = 1 
Query:   22 LPDGQVFDASNAPGRKPIAFKLGARQVIKGWEEVLLLMNAGAEVQMVVPASMAFGDKGICIDNGDCLVKPGMDVRYDLQLKRVAVSP 282
            L DG +FD  + PG+KP+AFK+GA+QVI G EE LL M AG E Q++VPA +AFG+KG+C + G+CLV P  +V+Y++ LKRVAVSP
Sbjct:  128 LSDGTIFDGLHGPGKKPLAFKIGAKQVIPGLEEALLSMQAGGERQLLVPADLAFGEKGVCTEKGECLVPPNTNVKYNVILKRVAVSP 214
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BLAST of mRNA_D-dudresnayi_contig9666.28451.1 vs. uniprot
Match: A0A8J2WS77_9STRA (Peptidylprolyl isomerase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WS77_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.980e-28
Identity = 46/87 (52.87%), Postives = 69/87 (79.31%), Query Frame = 1 
Query:   19 FLPDGQVFDASNAPGRKPIAFKLGARQVIKGWEEVLLLMNAGAEVQMVVPASMAFGDKGICIDNGDCLVKPGMDVRYDLQLKRVAVS 279
            FLP+GQVFD++   G KP++F+LG RQV+ G E+V+  M  G EVQ ++PAS+A+GDKG+C D+G+CL+KPG +++Y ++L RVA +
Sbjct:   97 FLPNGQVFDSTEKKGGKPLSFRLGERQVVPGIEQVVAQMKPGEEVQALLPASLAYGDKGVCTDDGECLIKPGTNLKYFIRLNRVAAA 183
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BLAST of mRNA_D-dudresnayi_contig9666.28451.1 vs. uniprot
Match: A0A7S0G2J4_9RHOD (Peptidylprolyl isomerase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G2J4_9RHOD)

HSP 1 Score: 107 bits (266), Expect = 3.910e-28
Identity = 44/88 (50.00%), Postives = 65/88 (73.86%), Query Frame = 1 
Query:   19 FLPDGQVFDASNAPGRKPIAFKLGARQVIKGWEEVLLLMNAGAEVQMVVPASMAFGDKGICIDNGDCLVKPGMDVRYDLQLKRVAVSP 282
            +L +G+VFD S +PGRKP+AF+ G  QVI GWEE +  M  G   +++VPA +A+GD+G+C++   CL++PG  + YD+QL RVA+SP
Sbjct:   21 YLANGKVFDNSESPGRKPLAFRFGQNQVIPGWEEGMAGMKPGGVRKLIVPAKLAYGDRGVCVEGQGCLIQPGETLSYDIQLLRVAISP 108
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BLAST of mRNA_D-dudresnayi_contig9666.28451.1 vs. uniprot
Match: A0A7S3EMP8_9RHOD (Peptidylprolyl isomerase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EMP8_9RHOD)

HSP 1 Score: 105 bits (263), Expect = 7.160e-27
Identity = 44/88 (50.00%), Postives = 64/88 (72.73%), Query Frame = 1 
Query:   19 FLPDGQVFDASNAPGRKPIAFKLGARQVIKGWEEVLLLMNAGAEVQMVVPASMAFGDKGICIDNGDCLVKPGMDVRYDLQLKRVAVSP 282
            +L +G+VFD S +PGRKP+AF+ G  QVI GWEE +  M  G   ++VVP  +A+GD+G+C++   CL++PG  + YD+QL RVA+SP
Sbjct:   88 YLSNGKVFDNSESPGRKPLAFRFGQNQVIPGWEEGIASMKPGGVRKLVVPPRLAYGDRGVCVEGQGCLIQPGETLSYDIQLLRVAISP 175
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BLAST of mRNA_D-dudresnayi_contig9666.28451.1 vs. uniprot
Match: A0A7S1TJB1_9RHOD (Peptidylprolyl isomerase n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TJB1_9RHOD)

HSP 1 Score: 105 bits (263), Expect = 1.290e-26
Identity = 44/88 (50.00%), Postives = 64/88 (72.73%), Query Frame = 1 
Query:   19 FLPDGQVFDASNAPGRKPIAFKLGARQVIKGWEEVLLLMNAGAEVQMVVPASMAFGDKGICIDNGDCLVKPGMDVRYDLQLKRVAVSP 282
            +L +GQVFD S +PGRKP+AF LG R+VI  WEE L  M +G   +++VP S+A+GD+G+C+ +G+CL+ P   + YDL+L R+A  P
Sbjct:  111 YLSNGQVFDNSKSPGRKPLAFPLGQRKVIPAWEEALSTMKSGGTRKIIVPPSLAYGDRGVCVPSGECLIPPNETLEYDLKLLRIAPPP 198
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BLAST of mRNA_D-dudresnayi_contig9666.28451.1 vs. uniprot
Match: A0A7S2BVQ8_9STRA (Peptidylprolyl isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BVQ8_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.690e-26
Identity = 44/88 (50.00%), Postives = 67/88 (76.14%), Query Frame = 1 
Query:   19 FLPDGQVFDASNAPGRKPIAFKLGARQVIKGWEEVLLLMNAGAEVQMVVPASMAFGDKGICIDNGDCLVKPGMDVRYDLQLKRVAVSP 282
            FLP+GQVFD++   G KP+AFKLG++QVI G E+V+  M  G EVQ ++P+++A+G+KG+C D G+CL+ P  +++Y ++LK VA  P
Sbjct:   68 FLPNGQVFDSTEKKGGKPLAFKLGSKQVIVGLEQVVSQMLPGEEVQALIPSALAYGEKGVCTDGGECLIDPNTNLKYYIKLKSVAAPP 155
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BLAST of mRNA_D-dudresnayi_contig9666.28451.1 vs. uniprot
Match: A0A7R9YBJ8_9STRA (Peptidylprolyl isomerase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBJ8_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.860e-26
Identity = 48/89 (53.93%), Postives = 68/89 (76.40%), Query Frame = 1 
Query:   19 FLPDGQVFDASNAPGRKPIAFKLGARQVIKGWEEVLLLMNAGAEVQMVVPASMAFGDKGICIDN----GDCLVKPGMDVRYDLQLKRVA 273
            +  DG+VFD+S   GRKP+AF++G  QVIKGWEEVL  +NAG+EVQM VP+++AFG+KGIC++      +CLV PG  V+Y L ++++A
Sbjct:   95 YKADGKVFDSSTTQGRKPVAFRMGQGQVIKGWEEVLERVNAGSEVQMRVPSALAFGEKGICVETPQGKDECLVLPGETVKYQLFVRQIA 183
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9666.28451.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KX02_9PHAE1.390e-5192.05Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6S9M8W0_HETAK1.670e-3865.91Peptidylprolyl isomerase n=1 Tax=Heterosigma akash... [more]
A0A7S2UZW0_9STRA6.980e-3561.36Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japoni... [more]
W7U710_9STRA3.320e-3058.62Peptidylprolyl isomerase n=2 Tax=Monodopsidaceae T... [more]
A0A8J2WS77_9STRA1.980e-2852.87Peptidylprolyl isomerase n=1 Tax=Pelagomonas calce... [more]
A0A7S0G2J4_9RHOD3.910e-2850.00Peptidylprolyl isomerase n=1 Tax=Rhodosorus marinu... [more]
A0A7S3EMP8_9RHOD7.160e-2750.00Peptidylprolyl isomerase n=1 Tax=Rhodosorus marinu... [more]
A0A7S1TJB1_9RHOD1.290e-2650.00Peptidylprolyl isomerase n=1 Tax=Compsopogon caeru... [more]
A0A7S2BVQ8_9STRA1.690e-2650.00Peptidylprolyl isomerase n=1 Tax=Florenciella parv... [more]
A0A7R9YBJ8_9STRA1.860e-2653.93Peptidylprolyl isomerase n=1 Tax=Pinguiococcus pyr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9666contigD-dudresnayi_contig9666:4458..5334 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score171.8
Seed ortholog evalue1.5e-40
Seed eggNOG ortholog2880.D7FQE6
GOsGO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005527,GO:0005528,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006457,GO:0006464,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009987,GO:0016020,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0031976,GO:0031984,GO:0034357,GO:0036211,GO:0042651,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035,GO:0061077,GO:0071704,GO:0097159,GO:0140096,GO:1901363,GO:1901564
EggNOG free text desc.histone peptidyl-prolyl isomerization
EggNOG OGsCOG0545@1,KOG0552@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionFKBP domain protein
Ec32 orthologEc-01_006400.1
Exons2
Model size285
Cds size285
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930918.0741496-CDS-D-dudresnayi_contig9666:4457..45951622930918.0741496-CDS-D-dudresnayi_contig9666:4457..4595Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9666 4458..4595 +
1690557964.9522214-CDS-D-dudresnayi_contig9666:4457..45951690557964.9522214-CDS-D-dudresnayi_contig9666:4457..4595Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9666 4458..4595 +
1622930918.0921578-CDS-D-dudresnayi_contig9666:5187..53341622930918.0921578-CDS-D-dudresnayi_contig9666:5187..5334Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9666 5188..5334 +
1690557964.964539-CDS-D-dudresnayi_contig9666:5187..53341690557964.964539-CDS-D-dudresnayi_contig9666:5187..5334Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9666 5188..5334 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9666.28451.1prot_D-dudresnayi_contig9666.28451.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9666 4458..5334 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9666.28451.1

>prot_D-dudresnayi_contig9666.28451.1 ID=prot_D-dudresnayi_contig9666.28451.1|Name=mRNA_D-dudresnayi_contig9666.28451.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=95bp
AVRCCRFLPDGQVFDASNAPGRKPIAFKLGARQVIKGWEEVLLLMNAGAE
VQMVVPASMAFGDKGICIDNGDCLVKPGMDVRYDLQLKRVAVSP*
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mRNA from alignment at D-dudresnayi_contig9666:4458..5334+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9666.28451.1 ID=mRNA_D-dudresnayi_contig9666.28451.1|Name=mRNA_D-dudresnayi_contig9666.28451.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=877bp|location=Sequence derived from alignment at D-dudresnayi_contig9666:4458..5334+ (Desmarestia dudresnayi DdudBR16 monoicous)
GCTGTGCGGTGCTGCAGGTTCCTCCCGGACGGGCAGGTTTTTGACGCAAG
CAACGCCCCGGGACGCAAACCAATCGCTTTCAAGCTCGGCGCGAGACAGG
TCATCAAGGGATGGGAGGAGGTACTACTCCTAATGAATGTAAGAACATTT
GGTGTACCATGCCGTACGTCGGTCTTGCTTCCTCTCTCCTGAATGCAGCG
TGGCGATTGTTGCGTCGATTGTTTATGTGGCGATTGTTGCATCGATTGTT
TATTATCTCCTGTGTATATGATAATGAAGGTTGCAAACATAATTGTGTGC
GTCTCGTAGATCTCTGCGTACTGCTTATGGTAAACGGAAACCACAGCTGC
TGCCTGCCTGTGTGTTCGCACTCTCGTCGTATGTGCTCCTTTGTTCGGTG
CAGAACGTAAACTTGTACGCTTTTTACTGGGAGTGCATATAATAGGCAGT
ATGTTGTTGTCAAATCCCACCTCCTACCGATTTTGTTGTATCCGTGGGTC
ATGTCATGCATAAGGGTGAAGAATTTGCACGGAGCCATTATTCACTGCTG
CAATTCTCAGCCAACAGGAAATATATTTTTTCTACTTTAGGTGATCGCAG
GGGAAACTTCGCCATCCTTCCCTGTGCAGCGATCCTCTATTCGAGTACGT
CGAGAACGGAAGTTGCACGGTGGCCCATCAATTGAGCCCAAAACGCACCC
ACACCCCATGGCTGCACTGAATTTCCGCAGGCTGGGGCCGAGGTGCAGAT
GGTTGTTCCGGCAAGTATGGCCTTCGGCGACAAGGGTATCTGTATCGACA
ACGGAGACTGCCTCGTTAAGCCAGGCATGGATGTACGCTACGACCTCCAG
CTCAAGCGCGTAGCCGTGTCCCCGTAA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9666:4458..5334+

>mRNA_D-dudresnayi_contig9666.28451.1 ID=mRNA_D-dudresnayi_contig9666.28451.1|Name=mRNA_D-dudresnayi_contig9666.28451.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=570bp|location=Sequence derived from alignment at D-dudresnayi_contig9666:4458..5334+ (Desmarestia dudresnayi DdudBR16 monoicous)
GCTGTGCGGTGCTGCAGGTTCCTCCCGGACGGGCAGGTTTTTGACGCAAG
CAACGCCCCGGGACGCAAACCAATCGCTTTCAAGCTCGGCGCGAGACAGG
TCATCAAGGGATGGGAGGAGGTACTACTCCTAATGAATGCTGTGCGGTGC
TGCAGGTTCCTCCCGGACGGGCAGGTTTTTGACGCAAGCAACGCCCCGGG
ACGCAAACCAATCGCTTTCAAGCTCGGCGCGAGACAGGTCATCAAGGGAT
GGGAGGAGGTACTACTCCTAATGAATGCTGGGGCCGAGGTGCAGATGGTT
GTTCCGGCAAGTATGGCCTTCGGCGACAAGGGTATCTGTATCGACAACGG
AGACTGCCTCGTTAAGCCAGGCATGGATGTACGCTACGACCTCCAGCTCA
AGCGCGTAGCCGTGTCCCCGTAAGCTGGGGCCGAGGTGCAGATGGTTGTT
CCGGCAAGTATGGCCTTCGGCGACAAGGGTATCTGTATCGACAACGGAGA
CTGCCTCGTTAAGCCAGGCATGGATGTACGCTACGACCTCCAGCTCAAGC
GCGTAGCCGTGTCCCCGTAA
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