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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 598 |
| Cds size | 516 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930895.0169156-UTR-D-dudresnayi_contig9483:5024..5105 | 1622930895.0169156-UTR-D-dudresnayi_contig9483:5024..5105 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig9483 5025..5105 + |
| 1690557955.9896715-UTR-D-dudresnayi_contig9483:5024..5105 | 1690557955.9896715-UTR-D-dudresnayi_contig9483:5024..5105 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig9483 5025..5105 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930895.0552325-CDS-D-dudresnayi_contig9483:5105..5220 | 1622930895.0552325-CDS-D-dudresnayi_contig9483:5105..5220 | Desmarestia dudresnayi DdudBR16 monoicous | CDS | D-dudresnayi_contig9483 5106..5220 + |
| 1690557955.9989374-CDS-D-dudresnayi_contig9483:5105..5220 | 1690557955.9989374-CDS-D-dudresnayi_contig9483:5105..5220 | Desmarestia dudresnayi DdudBR16 monoicous | CDS | D-dudresnayi_contig9483 5106..5220 + |
| 1622930895.0697925-CDS-D-dudresnayi_contig9483:7507..7908 | 1622930895.0697925-CDS-D-dudresnayi_contig9483:7507..7908 | Desmarestia dudresnayi DdudBR16 monoicous | CDS | D-dudresnayi_contig9483 7508..7908 + |
| 1690557956.0100718-CDS-D-dudresnayi_contig9483:7507..7908 | 1690557956.0100718-CDS-D-dudresnayi_contig9483:7507..7908 | Desmarestia dudresnayi DdudBR16 monoicous | CDS | D-dudresnayi_contig9483 7508..7908 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9483.28288.1 >prot_D-dudresnayi_contig9483.28288.1 ID=prot_D-dudresnayi_contig9483.28288.1|Name=mRNA_D-dudresnayi_contig9483.28288.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=172bp
MPPVPRLEAKGEMDARKQLPIGIDEERTSLTPRFAAGPGRATGRWEEQRH
ALRGSAFGPKVHEREGKGSALSEGSNGGSPIRGRGLRQDATRSPSSRGLA
KGKNDGKQNNDDNDNGKGRGKDGDDRRNKHKGNGDADGYGRGKGGDRGDN
KGQSDAAEHGDGSGADESNEGE back to topmRNA from alignment at D-dudresnayi_contig9483:5025..7908+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-dudresnayi_contig9483.28288.1 ID=mRNA_D-dudresnayi_contig9483.28288.1|Name=mRNA_D-dudresnayi_contig9483.28288.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2884bp|location=Sequence derived from alignment at D-dudresnayi_contig9483:5025..7908+ (Desmarestia dudresnayi DdudBR16 monoicous)
CCCATTTGGTATCTCTAGAAGGAGGACTTGCGAGTCTAGCAGCAAGGAAA
ATAGCAGCAGTGGGAGAGACAGGCGCTCGAGATGCCACCGGTTCCAAGAT
TAGAAGCAAAGGGAGAGATGGATGCGAGAAAGCAATTGCCTATTGGAATA
GACGAGGAGCGAACGTCTCTTACACCGCGATTCGCTGCTGGACCAGGTGA
GATAATAACCTTACTCGTATAGCAACAGACGCCGACGGTAGTAGTAGTAT
GATAGTAGTTTAGCAGGTTAGGCGACTACTATGCAGGTTGTCGTCTCAAG
ACGATTATGGCCGTTTGGAATGAGCTCCCTTCGATTATCCATTATCAAGT
GTGTGGGCTGGCTTTGTGTTCTTGGCCGCTGACACCTGCGCGCGTGAGCC
GGCTCATAAGAGTTGCGGCACTCTTGCTCGATTTATATCAATATTGATAC
ATTGGATAGTATCATTGGTGCGGAGAGAATGATACTTATCCCAGGATCGT
AAAACCGAAGCTATAGTAACACCACACCTACAACAGTACAGTAGTAGTAG
TAGTAGTACTCGTAGTATAAATAAAGTATAGACTACTGTAGTAGGTCAGT
GCAACAGAATATTCAGCAACAACTGTTGTAATGAGCTGTTGTACGAGTAG
GGCTGTACGCGTCGCTGTAGAGCTCTACGCTCTAGTATTAATAGTGCTAT
GAGTTGACGAGTAGCAGTGCAGAACATCAGTTAGAGTCATCTGTAGGGTG
CCACTTTCCTTGTACGCTGACGCAGGATACTATCATAGACCTAAACCGCA
CACGATGTGTGAAAACGGTGGTCGGCTGTGCCGTCTTGTTTGCCGCGTAC
AACAACAACCGCAGTCGTACGTCGCACCCACTTTCTTCGTACGTGTGATG
CTCTTATTCACGGTATTTGACTTCGTACTACTGTACTTTTTGCCATCGTC
TCTCTTGCTGCACGAATTGCGTCCTCGCGAGCGGGGAGGCACACCTGCTA
ACAGAGGGCATAATGCCGAGTTGTTGTGTTATTTGCGCGACATGGACAAC
AGTAGTAGTAGTCTCGTGCTTCATGCTAAACACAATACACAACAGCACCA
TGTTTCGTAGAGGGGTGCCATTTGGCGTATCATACCAAGTGCGTCGTGTG
TTTTTTGCCAACGTGTAGAGAGAGCTACGAACAACAGTAGTACAGTACTA
GTACTACTACCGTATATAGTAGTAGTATTGATAGTAGTACCAGTAGGCAC
CAAGGCGTTGCCCGTGCAATGTGTGTTCGAAGGGTGAGTGACATCCTATC
ACAACCAAACCCAACCCAACCCACGGTGTACACAAAATGTACGCACGTGT
TACTTGTGCCAAAATGTCGAGGCAAATCAGCAAATGAGTACAGTACATCT
GTTGTCTGCGCTTGCCTTTACATTATGGGTCAAGGTTTTTAAGTGTGCCG
TGTCACTTGCTGCTGTATCTTGTATTATACGTGCTGTCGATCTGCCGAGC
GCTCCCCATATTTTCTATTTTCGAGGCATTCTACTGAACAAGCACGCCTC
ACGACACAATGTACAATGATTGTACAACTTGCAATGTACAGAATACACAA
GTAGTGGTACTACTGTCTGTAGTGTACAAAAACAATTCCCTATCCCGTTT
ATGACCTTGCCCAATTCTTTCTCCAGCTCCGTCTCTCTTCGTTTGAGGTC
AAATAGCAGGCACCCCTCCCCCCTCCCCACTACGGTACGTGCCTATATTT
TTATCGCAAGAAGAGTGTAGCACTTTCTTCCCTCGTCGACTCGCGTCAAC
TGGTGCAAACACACTGTATCATAGGCGCTTCCTGCAGTCGATTTGTTGCA
CAAGAAAAAAGCCCCTCGGGGGGGCTCGAACTCGCGACCTTGACCTTAGT
AGATTTGTAGCTTATTCACTTGATCACACTTTGATGTGTGTGCAATATAA
TTGTGTGCCTACCACTCGGAACGATGTTTGTACTGTATTATACCAGGTAG
TTCTATTTGAATCGCCTCTTTTGGTGGGAGGCAGTCATCTGCACCGATGG
TATCCTGTGTTGTGATATCATGATATCCTACCGTACTCCACGTCTTTGGC
TTTTGGTTTCGCCCTGCTGACGACATACGAACTTCCCACAACATGATTCC
GAGAATGAGATTACGACTTCACTATCATACTGTTGTACCATACAACTGCT
ATACTAGTATTGTCTGTTGTGTACTTGTAATGTTCTCGATTGCTCTCCAC
ACAGGTGATTCCGTGTATCACTTGCTCTACAACCGCATGGAAAACACCGG
CAGTGCCCACGCTTTGTGCGGGTTTCATTTGTGACACCCCAGCCCTGCCG
CATCATCACACGAAGGGTATATCCGGTGTTCCTGCAGTAGTTATCCGTTG
GCGTAACTCTGGCGATCTGTTCTGTTGCTTTGGCTTACTCCATTTGGTGT
TCTCTATTTATTTCTCACAACTATATTGTGCAGGGAGAGCCACTGGCCGC
TGGGAAGAACAGCGTCACGCTCTTCGAGGCTCCGCGTTCGGGCCGAAAGT
GCATGAACGCGAGGGTAAAGGCAGTGCGTTGTCGGAAGGGTCCAACGGCG
GCAGCCCCATCCGCGGCCGCGGCCTTCGACAGGACGCTACGCGGTCGCCC
TCAAGCAGAGGTTTGGCAAAAGGCAAGAACGACGGCAAACAAAACAATGA
CGATAACGACAATGGAAAAGGACGTGGCAAAGACGGCGACGACCGCCGAA
ACAAGCACAAAGGTAACGGTGACGCCGATGGATACGGACGTGGCAAAGGC
GGCGACCGCGGAGACAACAAAGGTCAGAGCGATGCTGCCGAGCACGGGGA
TGGGAGTGGCGCCGACGAAAGTAACGAGGGCGAG back to topCoding sequence (CDS) from alignment at D-dudresnayi_contig9483:5025..7908+ >mRNA_D-dudresnayi_contig9483.28288.1 ID=mRNA_D-dudresnayi_contig9483.28288.1|Name=mRNA_D-dudresnayi_contig9483.28288.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1032bp|location=Sequence derived from alignment at D-dudresnayi_contig9483:5025..7908+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGCCACCGGTTCCAAGATTAGAAGCAAAGGGAGAGATGGATGCGAGAAA
GCAATTGCCTATTGGAATAGACGAGGAGCGAACGTCTCTTACACCGCGAT
TCGCTGCTGGACCAGATGCCACCGGTTCCAAGATTAGAAGCAAAGGGAGA
GATGGATGCGAGAAAGCAATTGCCTATTGGAATAGACGAGGAGCGAACGT
CTCTTACACCGCGATTCGCTGCTGGACCAGGGAGAGCCACTGGCCGCTGG
GAAGAACAGCGTCACGCTCTTCGAGGCTCCGCGTTCGGGCCGAAAGTGCA
TGAACGCGAGGGTAAAGGCAGTGCGTTGTCGGAAGGGTCCAACGGCGGCA
GCCCCATCCGCGGCCGCGGCCTTCGACAGGACGCTACGCGGTCGCCCTCA
AGCAGAGGTTTGGCAAAAGGCAAGAACGACGGCAAACAAAACAATGACGA
TAACGACAATGGAAAAGGACGTGGCAAAGACGGCGACGACCGCCGAAACA
AGCACAAAGGTAACGGTGACGCCGATGGATACGGACGTGGCAAAGGCGGC
GACCGCGGAGACAACAAAGGTCAGAGCGATGCTGCCGAGCACGGGGATGG
GAGTGGCGCCGACGAAAGTAACGAGGGCGAGGGAGAGCCACTGGCCGCTG
GGAAGAACAGCGTCACGCTCTTCGAGGCTCCGCGTTCGGGCCGAAAGTGC
ATGAACGCGAGGGTAAAGGCAGTGCGTTGTCGGAAGGGTCCAACGGCGGC
AGCCCCATCCGCGGCCGCGGCCTTCGACAGGACGCTACGCGGTCGCCCTC
AAGCAGAGGTTTGGCAAAAGGCAAGAACGACGGCAAACAAAACAATGACG
ATAACGACAATGGAAAAGGACGTGGCAAAGACGGCGACGACCGCCGAAAC
AAGCACAAAGGTAACGGTGACGCCGATGGATACGGACGTGGCAAAGGCGG
CGACCGCGGAGACAACAAAGGTCAGAGCGATGCTGCCGAGCACGGGGATG
GGAGTGGCGCCGACGAAAGTAACGAGGGCGAG back to top
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