mRNA_D-dudresnayi_contig10581.662.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10581.662.1
Unique NamemRNA_D-dudresnayi_contig10581.662.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig10581.662.1 vs. uniprot
Match: D8LJQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ7_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 3.280e-18
Identity = 57/164 (34.76%), Postives = 82/164 (50.00%), Query Frame = 2 
Query:  113 GSFWTRILRLGVAYCPRVKKRLPWLMSERLLVVVALSIGLGAMAFPLYYVHSINGPFAVIEFAMTMIDKIFIVQVVQLGATVVLAIPIVWRVDDLFKISTEIIAATITQTVQVGGNALAREYGQKELHYWLNRQNVAFVGSIVLFSIVVIDPLRRLTFNPLSKT 604
            GS+  R LRL V + P+ K+ LPWL+ ER  V V +    G +A PLY+ +++     V E      D +  V +           P +  VDDLF IS E+   T    +   G  L  +YG      WL   N+  + + V+FS+ V+DPLRRL F+PL+ T
Sbjct:   35 GSYICRALRLAVVFHPKAKRALPWLIPERNYVAVLMVASCGMLAIPLYHEYTLE----VWEIIPKQTDILIWVSI-AFAVVQACIYPFIRNVDDLFSISKELAIVTAAVILLAVGQKLEGDYGGVYERRWLGN-NLFLLFAAVVFSVSVVDPLRRLAFDPLAAT 192
[Close]
BLAST of mRNA_D-dudresnayi_contig10581.662.1 vs. uniprot
Match: A0A6H5KGT8_9PHAE (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGT8_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 1.680e-17
Identity = 54/173 (31.21%), Postives = 102/173 (58.96%), Query Frame = 2 
Query:  104 SFSGSFWTRILRLGVAYCPRVKKRLPWLMSERLLVVVALSIGLGAMAFPLYYVHSI-NGPF----AVIEFAMTMIDKIFIVQVVQLGATVVLAIPIVWRVDDLFKISTEIIAATITQTVQ-VGGNALAREYGQKELHYWLNRQNVAFVGSIVLFSIVVIDPLRRLTFNPLSKT 604
            S +  + +R++RL V + P++++ +P LMSE+LL+ V+LSIG+ +++ P+YY  ++ N  +    A +++  T++ +I          T +  +P+VW +DDLF IS E++   +   +Q V       E    E+  ++N  N+  +   VLF + VIDP+RRL F+P++++
Sbjct:   70 SIASCYISRVIRLAVGFHPKLRRSMPKLMSEKLLIAVSLSIGVMSLSIPIYYKITVPNEDYRDHQAGVKWLCTLVLQI----------TQICLLPVVWYIDDLFHISRELMVIIVLGLIQSVFVKLFIEEELTGEIRNFINPPNMQLLTISVLFGLSVIDPVRRLKFSPMAQS 232
[Close]
BLAST of mRNA_D-dudresnayi_contig10581.662.1 vs. uniprot
Match: D7FTW1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 4.630e-5
Identity = 28/78 (35.90%), Postives = 44/78 (56.41%), Query Frame = 2 
Query:  371 PIVWRVDDLFKISTEIIAATITQTVQVGGNALAREYGQKELHYWLNRQNVAFVGSIVLFSIVVIDPLRRLTFNPLSKT 604
            P +  VDDLF IS EII  T    +      +  ++G      W+++ +V+ +   VLF + ++DPLRRL F+PL+ T
Sbjct:  105 PFIRNVDDLFSISKEIIIVTAAVVILAIEQNVVDKWGGVYERRWIDK-SVSILFVAVLFGVSIVDPLRRLAFDPLAAT 181
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10581.662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJQ7_ECTSI3.280e-1834.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGT8_9PHAE1.680e-1731.21RGS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7FTW1_ECTSI4.630e-535.90RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10581contigD-dudresnayi_contig10581:1458..9163 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal anchor
Exons7
Model size610
Cds size594
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10581.662.1prot_D-dudresnayi_contig10581.662.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10581 1474..9163 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927562.6929746-UTR-D-dudresnayi_contig10581:1457..14731622927562.6929746-UTR-D-dudresnayi_contig10581:1457..1473Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10581 1458..1473 +
1690556808.5256245-UTR-D-dudresnayi_contig10581:1457..14731690556808.5256245-UTR-D-dudresnayi_contig10581:1457..1473Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10581 1458..1473 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927562.7079647-CDS-D-dudresnayi_contig10581:1473..15391622927562.7079647-CDS-D-dudresnayi_contig10581:1473..1539Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10581 1474..1539 +
1690556808.535093-CDS-D-dudresnayi_contig10581:1473..15391690556808.535093-CDS-D-dudresnayi_contig10581:1473..1539Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10581 1474..1539 +
1622927562.7208242-CDS-D-dudresnayi_contig10581:3023..31341622927562.7208242-CDS-D-dudresnayi_contig10581:3023..3134Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10581 3024..3134 +
1690556808.5445006-CDS-D-dudresnayi_contig10581:3023..31341690556808.5445006-CDS-D-dudresnayi_contig10581:3023..3134Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10581 3024..3134 +
1622927562.7331102-CDS-D-dudresnayi_contig10581:4618..47161622927562.7331102-CDS-D-dudresnayi_contig10581:4618..4716Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10581 4619..4716 +
1690556808.5608153-CDS-D-dudresnayi_contig10581:4618..47161690556808.5608153-CDS-D-dudresnayi_contig10581:4618..4716Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10581 4619..4716 +
1622927562.745809-CDS-D-dudresnayi_contig10581:5470..55601622927562.745809-CDS-D-dudresnayi_contig10581:5470..5560Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10581 5471..5560 +
1690556808.5728064-CDS-D-dudresnayi_contig10581:5470..55601690556808.5728064-CDS-D-dudresnayi_contig10581:5470..5560Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10581 5471..5560 +
1622927562.7599247-CDS-D-dudresnayi_contig10581:6498..65691622927562.7599247-CDS-D-dudresnayi_contig10581:6498..6569Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10581 6499..6569 +
1690556808.5820844-CDS-D-dudresnayi_contig10581:6498..65691690556808.5820844-CDS-D-dudresnayi_contig10581:6498..6569Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10581 6499..6569 +
1622927562.7719421-CDS-D-dudresnayi_contig10581:7210..73131622927562.7719421-CDS-D-dudresnayi_contig10581:7210..7313Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10581 7211..7313 +
1690556808.5909936-CDS-D-dudresnayi_contig10581:7210..73131690556808.5909936-CDS-D-dudresnayi_contig10581:7210..7313Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10581 7211..7313 +
1622927562.7832148-CDS-D-dudresnayi_contig10581:9108..91631622927562.7832148-CDS-D-dudresnayi_contig10581:9108..9163Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10581 9109..9163 +
1690556808.602829-CDS-D-dudresnayi_contig10581:9108..91631690556808.602829-CDS-D-dudresnayi_contig10581:9108..9163Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10581 9109..9163 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10581.662.1

>prot_D-dudresnayi_contig10581.662.1 ID=prot_D-dudresnayi_contig10581.662.1|Name=mRNA_D-dudresnayi_contig10581.662.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=198bp
MTYFAAFRLYPTLPLNVESLYIVLVVSGLSFSGSFWTRILRLGVAYCPRV
KKRLPWLMSERLLVVVALSIGLGAMAFPLYYVHSINGPFAVIEFAMTMID
KIFIVQVVQLGATVVLAIPIVWRVDDLFKISTEIIAATITQTVQVGGNAL
AREYGQKELHYWLNRQNVAFVGSIVLFSIVVIDPLRRLTFNPLSKTYP
back to top

mRNA from alignment at D-dudresnayi_contig10581:1458..9163+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10581.662.1 ID=mRNA_D-dudresnayi_contig10581.662.1|Name=mRNA_D-dudresnayi_contig10581.662.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=7706bp|location=Sequence derived from alignment at D-dudresnayi_contig10581:1458..9163+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATCGATATTATCCATCATGACCTACTTCGCCGCGTTTCGGCTCTACCCGA
CGCTGCCGCTCAACGTGGAAAGCCTCTACATCGTGAGTCTTCTCTGCAAT
GCATTCGTTTTGTGGTGTTGGTGTTGATTGGGTTCCGTGAACTTATGCGC
CAATCGCCGACTCTTACAGTATCTTGTTGCACGGGTATGGGTATTATGAC
GATTGTTGCAACAATGAGACAATAACGATATATATGGCTTATACAATTGG
TTTGAATTAATTCGTTTTCACTTCCGAAGGAGACGAAAAAGTTACCGGTA
TAGTCTATGATACATATCATACATATCCGCAGCACATGTAACACACGCAT
AGACCATAGAAAAGTGAGCTGTGAACGCAGATGGCACCGCTTGGAAACGG
ACGAAGGTACAGGAGCATAGTAATAACTGAAAGCAGATACTACTGTACTT
ATACTACATCACAACATTACTGCAACAGTATGTATATGATAGGGCTGTAT
ATATTCATACTAATTCAGGACATTAGTTAATTTCCACATCCGTAGGACAC
GATAACCTCTAGAACGCCAAAAATTAAATAAACGCACTAAAATCAAGTTA
TTATTGTTTATTTTTTATGACGGGGAGACGAAATAAATTAATAGTTATAA
CTATTTTATATGAAGGTTAATAATAATTGTTTGAATTAATTAATCTTCAC
TCCCGAAGGAGACGATACTAAGATGATGATAATGATGATGATGATAATAA
TAATAATAATAATAATAATAATAATAATTGTTTGAATTAATTAATTTCAC
TTCCGAAGGAGACGATATCGTACCTCGAATGCTCGCACTAGCTACATGCA
AAAAAAATAAAAAATAAAGTAAAACAAATACTTCGAAGAACGGGGCTTGG
TGAGGGTTGTTCGTAGACTGGATGCTAAGTCGGAGGTTGACTAGTATATC
ATCTGGACCCCGACGTAAAACCGACTAGAGACGGAAACCTCCCGCCTTTT
AGTTGTCCGGGTTTTGTTTACTTACTCCTGCAAATATACTTGTGTTCGTT
TGCCGTCCGAGAATGCGCAGAAGCAAGAGCCGGATTTTCACAACGACATT
GGTTTTTCGATAAGACGCTGGATTCGTTTTGTACGGCAGAACTTTTGTTT
GCCTGCAAAATAACCCCATTTACCGACGACTCAAACTAGAGTACAACGTA
TAGCATCCGAGCTCTACTATAGATAGCATCGCGTTTTGCGAGATACCTCT
ACTTACTTGTCGTACCCGGACGGTGGTCTGTGAGGAGTACCGATCGTGAC
GTAAAATTCCATCAATGCCCATTGCAGTATTTTTCACGGCGGACACGGGA
TGCCTATATCTTATTCCCCATATCTTGCGCTACTATTAATTAATACGTGC
CTTTCCTTACTTTGTCGGTGTATTTTGATGCAAGTATTATATTGCAATCT
CCCTCCGGGAGAGGCGTCTTTGCCGGTCTAGAGTGTAATGCCACAAGGAG
GCGTGTGTGAGAAACTCCCCCCCGCTCCCCGCTTTGCCCCTACGCGGCCC
GGGCCTGACTATGCAGGTTTTGGTGGTATCCGGGCTGTCCTTTAGCGGCA
GTTTCTGGACTCGGATCTTGCGGCTCGGCGTGGCGTACTGTCCACGGGTG
AAGAAAAGATTACCATGGCTCATGTCGGTGAGGGGGTTGATAGTACCGTT
ATAGTACCGTTGGTGCTTCGGGGAGTAAGGGTGCGGTACGGGCATGCCAT
TAGACTCTCGGATTTTGAATAAGGTTGGCTTTTCCCCGTGACTTTATATC
CACATGGAGTTGGCGCACGGAGGCTGGAACGAGCGGTCCGGTGACAACCA
TCCCTTCTCGGTGATGTCTTAAGGGTTCACCCTGCTGGAGGCGTGCTTTC
ATGGAAATATGAAACGTGACACACCGATTGGTTAGATCGTCAGTGACGGC
AGCGTATCGGTTCGATTCTCTTTTGAGCAGGACGGTGTTTATTTTAGCGC
GACAGCAGTCGTTGACCAGAGCTCGCGCGCACGGAGTCGGGGTTTGTGAC
GTGTTGTTTAGAGGGGGGATGGGGTCATGCTCTAATCTATCCGGAGGATG
CGCGTGTTGTAATCACGACGTTTGTGCGGTGGGGGGGAGGGGGGGGGGGG
GTTAGTCACCGTATAAGGTGATTCGCACTAAATATATCGAAGATGTTGCC
AACGTTTGTAGTAGGTCTTCGTTTTCCCTTCCATCGGATCACCGGACTTG
TAGGTGGCTGTCCCAACGGCGCAGGAAAAAGGCGTAACACATTCGCGCTC
AACATGACGGTTGTATCGCTAGCCACGCGTCTGTGCTTTTTCATGAACCA
CGACGCCGTGAACGCATGTGTATGCTTGTTGACATCTCACCTATGATAGT
GTATCCCCATAGGCGAATAATAATCCCGACGCGTAGATGTGGCGATAAGG
CGTGTTGTTGTCAACCATTGTTGCCCCCTGTTGGCGGAAGTCCCGGGGTT
TCGAATCGCGGTAAATGTCACTTTTATGTATCGTCTTTCCGTCGCGGAAA
GCGCGAGTGCGTGAGTAGGCAAAAATCCAATGGAAATCGACGAGCTGTGG
GAATGCCGAACCGTAGCCGCGATAAAACGTCCAGACAAGTACTGTACGGG
GGCGTGGGAGAGGGGAAGACGCCTGCGACCACAGTTTGCACAGAATGCCA
CCGAGTGACGAGCTTAAACTAGAAAGTTATACTGCTGGTTAAATAAGTTA
ATTAAATAGACTACCAGGTACGTCGTAGTTCGTGGTATAGCCAAGCGCTC
TACATACTATAGTCGAGGGAATTGTTTAGATACCCTGACCAATCGCCTGT
CTCCTCCCGTTCTTCTATGTTCCGGGTCGATTTGTCTGTGTTACGCTCTA
TCCCGTGGCTCTTACTTATTTTTGCAGTCGTCTGTCTACCCTTGACATTT
TGAGTTTTGGCAGTTGTTGAGGGCTTATTTTGTTTCTCTTTGTCCTGTAT
TCCTTCGCAGGGCTTGCTACCCTCTGTTCGAAACACCTGTTATTGGATAG
GTCAATCGGTGAAGTGCATGAAAATGAACTAAGCAAGGTTAACAGTGTAC
TCAATTGATAGATCAATTCAAATCTAACGATGTGCGTTTGCGTCACCGCG
CTGCGCGGTAGGAGCGTTTGCTGGTGGTCGTGGCTCTTTCGATTGGTCTG
GGCGCAATGGCCTTTCCGCTCTACTACGTCCACTCCATCAACGGTCCCTT
CGCCGTTATGTGAGTTTTCGTGTGGTGCTCAGAGTGTAGCGACTTTCGAG
CAACGCACGTCGACGGTAGTGTGCACGTATCAGTTGCCTTACGCCACGGT
AGCATGCAACCCGGGTAAGCGTCATGTGGTGAACATCATGCCGCGGCCAT
ACAATGCTAACGTTGCAGTCTGTGTAAGGTGCATGAACCCGTCCGTAGAC
TACTGTAGCACCGCATGGTGGAGCAACGACCACGTCACAGTCGGTGCTGA
GGTTTTTTATACAGCTGTCATCGTGTGACCCCTACGCCCCAACTGCATCG
TTGATGGGTCGCTTGTACAACGGCTATTCATTGGGGTGTGACACTTACGT
AACTGCCCTTTATCGATGGCCATCGAGCAAATCCCTGGGGTAGCGCTGGT
TGTAGTCGCCACTCGTGTAGCCGGGGTGACACGCCCATTGCGATTCTCAT
GTACCTGCGGCGCTGTGTTGGTGTGCTGTAGTGGCCACTGGTCGCTTATT
TTACACCGTAGGTCTCCTTTGTGTCGATATTACTCTATGACGGCAACGCT
TGCCAATCTTCAGAATATCGCGGCAACGCTTGTGTAAACGTCGAGTGAAC
TACACTGCCAAGCGTGTCACGGACACCGTACAACGGACGATTCGCATCAG
CAGCAGATGGAGTGTGTACATATATATATATATATATATGTGCCATGATA
CGTTGACGATGAAACCCCGTGTTATGCTCTCGCGCTGTCCATTTCTGTCT
GTTCCGGTGCCAGCGAATTTGCTATGACGATGATTGACAAAATATTTATC
GTCCAAGTGGTTCAGCTTGGAGCCACGGTCGTCCTCGCGATACCTATCGT
ATGGTGAGCTAATATACCACAGTAGTAAAGTACAGTGCAGGTGACCGCCG
ATTGCGCTATCTTGTCCAGTTTGACGACGTCGTCGCATGCCAACCACTTC
CTGTCGTATGAGAAGACCTTCTCAAATCCGGCAGCTCAACCCCGTAACGA
GGCTCTGCATACTTCGTTCGGGCTTGCCGAAGGCAGCATGAGTTCGGCCT
ATGTACTAAAGCAATAGTACCCCGCAGTCGATCCCGTTTGATTCCAGTCG
TTCAGGGGCCTATTTTGGAGGTGGCTAGACTTTATATAGCGCCTAGTCCC
TGGGCCCAACGGAAGCCGCGCAAGTTGAGCTCGAAGAGGACAATAAGTGT
GTATAAAATCCCGAAACACGTAAATAAACGGTACTCGAAACACTCCTCGT
ATCCCTATACAAGATATCATGCTGCTGTTATGAAAGTAACCAAAACCTTG
TGTTTTTGTACTCCTTTTCCAGTTAGTTTCTGTTAATAGGCCCATATATA
CTATGTTGATACTGTTGCAGCGTACCATAGTTTTGATGCTGTGATGGCCG
TCATATCAGTTTCGTTGTTGTTGCTGTTGTTTTTTCCAAGTGGCCCCAAG
AGTCATGGTTCAGCCGATTTGCTTTGAAAACCTCAGGTCAGTGATACCAG
CCAAACGTCTTACTATTTTTTTTCATGCCCACGCCATTTTGCTTGTTTTC
ATGCTCCTACCCCACCTGTTTACTCGCAGGTTTTGTCCACGGCAGTAGCA
ATTACAGGGAGAACGGTCTATTCTATATCCAGCGTGGCTTTAGCCGAGAT
TCTCTTATGACACCCTACTGTTGTTTTAACAATGGATGCAGATTAGTCAA
GTTGAAATTTTATACGCACTAAAATTCGATACGCGCACGGTGAAGTGTAT
CACAGTTGGGCGTTTTTCGTTTTTTGCTGAAAACCCGGCAGGCGCGTGGA
CGACCTTTTCAAGATAAGCACGGAGATAATAGCAGCAACGATCACCCAAA
CAGTTCAAGTAGGTAAGTAACAGGTTTTGTCACCGTCGACGACCCATCAA
GTCACAGAGACTACTGGTGCATCGAGTCGAACGCGTGTTGAGAGCAGGCT
CTAGCGTACAAGTGCAGCTCTACCCTCTCTCGATCATTGAAAACGCGTGT
TCTATTTTATCGTTGGCGTATATATGCGCTATGTAGCTCTAGAGCTCTGT
TTTGTTTTCGCCTATTCGTGTGTGTGTGTGTGGTGTTGCTTCTACATGCT
ATGTTTATCGGGTACGATACGTCATAACAGCAATGTGAGCACGGATCCTT
GTCGGATAGCTCAACCATCGGTTCATAATTTGCGATCACGACCAAAACCA
AAAGACAAGATCCGTTTTTTTGTTTTCGCCGATTTCCGTTGATTCGCTGT
TCTCCTTTTGTCTTGACTTGTTTTGTTTTTGTTCTCTTCCATGTGCACCG
CTTAATCGAGTATAAACTTTCGCAGTCCGCGACAAGCGGATCTTTGAAGT
TACCGCAGTACCGAAGCTATGTTGTGTCGTGCGTGATCCTATTTGTGAAC
GACGCTCGTGTCTGTCCCCCTTTCGATCTGTCTTGCCATACGCATGTTTT
GGTCGTTCGCAATATACTCTATGTGACGGACCATCTCTACAATGATGTAA
TAGGCGGCAACGCTTTGGCGAGAGAGTACGGGCAAAAAGAGTTACATTAC
TGGCTGAACCGGCAGAACGTGGCCTTTGTGGGAAGCATCGTCCTGTTCAG
CATCGTGTGAGTGGCCTGCCTCATGGAAGTCGACGACGAACGGATGAATG
CGTGGGACATTATCAATGAAAGATATCGGCGTACACTATCCTGTACTGCT
GTGCGTAAATCAATCAATTAGTTGTGTTGCAGTCTGCTGTTTCGAAATGC
CCGGCGTTGTTGGGAGATAATTACAGGTATTTACACGTAGGAAAGTCGTC
CTTTTCGGCAAAAATATTGCCCTATCCGGGAAACGCCGAACGATTAATCA
ACCAATCAATCAATCAATCAACCAAACATCAATCGCGAACAAAGTATTTC
CTGGTATGAATGGCGTATCGTCCAAGGTACAGACAAGATCGTAATAATCT
GTATTGTAATACTGCACAATAAACCTTGCCGTTCGCGAGTGCTCGGCGTT
GGTATCCGTATGCTCACATCAATAGATCCTTTCGGAGTCGAAACTGCTTG
GCTCGTCTGGACCTGTCTATGATAGACGATAAATATTGTAGGAAGGAAAA
GGACACCATACAGTAGACCCCGTTCAACGGCTCTCGCACGACAACAATAT
CCGCTGAGAAGGGGGGGGGGGGTATCTCCTTCAACGCTAACACCTCCACA
TAGTAACAACATCGACGGAGACCGAGGGAGGGCTGTCCATTTATGTTTTG
CTTTTAGCTGTCACTGAGGCGTTTTCAAAACTGTGGCATCGAATTGTGTG
CTGTTTCGCCCGCGTTGTAGGGCTTTGGATTTTTCCGTTTGTGCCACACA
CACAACGACAAACGCGAAAGGCGCTCTTGCGATATAGTCGTCGCTCAACG
GTGTGGAACTTTTTTCGACCTGTAGGGTTGTTGCATTACGGCACCGGACG
TTACCTGGCATGGATGTAGGTGTTCGGATATGCTTGATACAATTTTTCGG
ACGGTACGCTACAGTTAGCATTTCAAACGTCATCATCGTCTCCTTCTGTT
TGTGCCGCCATGTCTTTCACAGTTTAGATTTTGCGGACGATAAAGCAAGT
CCCTCACTTATCTGGGGAAGCTGTTCTCCCCGGCTAGCTAACTCCCACGG
CCTGATACTCCTATGGGGAGCAGAAGAGAGTCCGACGTACCCACGTAGCC
GTAGCGGCGGCAATGTTGTGTTTTACAACACGGTTGCATCGGCACAAAGA
CACAATTTTGTGTGGCGAGGTTAAGCGTTTCTTATACCTGTCTGCCGGAG
GATAAACATTATTCGACACATGAATTAAAGAAAAAAGCACCCGCGATTGC
TCGTGTGACTGATGAATGAAAAAAAACGGATAGCACAGCAGCATTTCGTG
GGTGATGGACGATTGATACTTTTGTTTTTGCCGGTTTTAGAGTTCCCACG
CGTTTTATCGTGGTTATCTTGGTTACTCACGATAACTTTGTTTTGTTTTA
GTTTGACGAGGGAGTGGGGATTTTGGCCCATCGCATTATTAGTTTTGTTG
CTGTTCATGCAGCTCGACCGTAGTAGGTTTCGCTGGGCGGAAGTGAGGGT
CGCGTTACAAAACACGATGGGTGTGCGATGATGATACACTATCATAGTGA
AGGTGCGGAAACGGGCCAGAGGCCGAACACAGAACACGGTGGAATCTGCA
TGCAGAAATAATTGTGTTGGCAGTTGGCAGTCAGCAGCTACAGCGACGGT
GTGGACGGTGACTTCCGTTTCCTCCTCGGCTCTCTCACTCGTACAAAGAG
CCAGATCTTCACGGTTTTGAGCATGTTAACGGTCAAACTTTGGTAGGCGC
GGATTTTGTGATACCCCTCTTCCTACCCCCCCTACGTTCCCGGCACCGCA
GAGTGATCGATCCGCTAAGGCGGCTAACGTTTAATCCTTTGTCCAAGACT
TATCCG
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig10581:1458..9163+

>mRNA_D-dudresnayi_contig10581.662.1 ID=mRNA_D-dudresnayi_contig10581.662.1|Name=mRNA_D-dudresnayi_contig10581.662.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1188bp|location=Sequence derived from alignment at D-dudresnayi_contig10581:1458..9163+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGACCTACTTCGCCGCGTTTCGGCTCTACCCGACGCTGCCGCTCAACGT
GGAAAGCCTCTACATCATGACCTACTTCGCCGCGTTTCGGCTCTACCCGA
CGCTGCCGCTCAACGTGGAAAGCCTCTACATCGTTTTGGTGGTATCCGGG
CTGTCCTTTAGCGGCAGTTTCTGGACTCGGATCTTGCGGCTCGGCGTGGC
GTACTGTCCACGGGTGAAGAAAAGATTACCATGGCTCATGTCGGTTTTGG
TGGTATCCGGGCTGTCCTTTAGCGGCAGTTTCTGGACTCGGATCTTGCGG
CTCGGCGTGGCGTACTGTCCACGGGTGAAGAAAAGATTACCATGGCTCAT
GTCGGAGCGTTTGCTGGTGGTCGTGGCTCTTTCGATTGGTCTGGGCGCAA
TGGCCTTTCCGCTCTACTACGTCCACTCCATCAACGGTCCCTTCGCCGTT
ATGAGCGTTTGCTGGTGGTCGTGGCTCTTTCGATTGGTCTGGGCGCAATG
GCCTTTCCGCTCTACTACGTCCACTCCATCAACGGTCCCTTCGCCGTTAT
CGAATTTGCTATGACGATGATTGACAAAATATTTATCGTCCAAGTGGTTC
AGCTTGGAGCCACGGTCGTCCTCGCGATACCTATCGTATGCGAATTTGCT
ATGACGATGATTGACAAAATATTTATCGTCCAAGTGGTTCAGCTTGGAGC
CACGGTCGTCCTCGCGATACCTATCGTATGGCGCGTGGACGACCTTTTCA
AGATAAGCACGGAGATAATAGCAGCAACGATCACCCAAACAGTTCAAGTA
GGCGCGTGGACGACCTTTTCAAGATAAGCACGGAGATAATAGCAGCAACG
ATCACCCAAACAGTTCAAGTAGGCGGCAACGCTTTGGCGAGAGAGTACGG
GCAAAAAGAGTTACATTACTGGCTGAACCGGCAGAACGTGGCCTTTGTGG
GAAGCATCGTCCTGTTCAGCATCGTGCGGCAACGCTTTGGCGAGAGAGTA
CGGGCAAAAAGAGTTACATTACTGGCTGAACCGGCAGAACGTGGCCTTTG
TGGGAAGCATCGTCCTGTTCAGCATCGTAGTGATCGATCCGCTAAGGCGG
CTAACGTTTAATCCTTTGTCCAAGACTTATCCGAGTGATCGATCCGCTAA
GGCGGCTAACGTTTAATCCTTTGTCCAAGACTTATCCG
back to top