mRNA_D-dudresnayi_contig10575.651.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10575.651.1
Unique NamemRNA_D-dudresnayi_contig10575.651.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig10575.651.1 vs. uniprot
Match: A0A0A0RJW0_9VIRU (GIY-YIG domain-containing protein n=1 Tax=Yellowstone Lake virophage 6 TaxID=1557034 RepID=A0A0A0RJW0_9VIRU)

HSP 1 Score: 105 bits (262), Expect = 1.680e-25
Identity = 57/120 (47.50%), Postives = 77/120 (64.17%), Query Frame = 1 
Query:    1 MVNYGNGKIYKVEPVCEHVEGEIYIGSTTERYLSRRMDKHRSGYKLWQNNGTGGHVRSYDLFDKYGIENCRIILLETVHANSKDELESRESHYIQTLKCVNKQIPLR-VKILGKNAYDKL 357
            MVNY NGK+YKV  +  +   +IYIGSTT+ YLS+RMD HR  YK W+NN    ++  + +FD+YG+ENC I LLE     S+DEL   E  Y++ L CVN+ I  R +K   K+  D+L
Sbjct:    1 MVNYSNGKVYKVWSLLGN---KIYIGSTTKEYLSQRMDTHRQNYKKWKNNKYH-NITIFKIFDEYGLENCNIELLEAKDCKSRDELNKLEGEYMRKLDCVNRCIAGRKIKEYLKDKKDEL 116
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BLAST of mRNA_D-dudresnayi_contig10575.651.1 vs. uniprot
Match: A0A519RS11_FLASP (GIY-YIG domain-containing protein n=1 Tax=Flavobacterium sp. TaxID=239 RepID=A0A519RS11_FLASP)

HSP 1 Score: 89.7 bits (221), Expect = 4.450e-19
Identity = 55/128 (42.97%), Postives = 75/128 (58.59%), Query Frame = 1 
Query:    1 MVNYGNGKIYKVEPVCEHVEGEIYIGSTTERYLSRRMDKHRSGYKLWQNNGTGGHVRSYDLFDKYGIENCRIILLETVHANSKDELESRESHYIQTLKCVNKQIPLRVKILGKNAYDKLYKSENIEHI 384
            MVNY +GKIYK+    ++  G IYIGST E  L+RR+ KHRS Y  + N G   +V SYD+ +        IIL+E    +SKD+L++RE  +I+  KCVNK IP R         +K Y+ +N E I
Sbjct:    1 MVNYADGKIYKI---IDNTNGNIYIGSTAEPTLARRLAKHRSNYNRYLN-GQCHYVTSYDILENGDYS---IILIEKYSCDSKDQLKARERFHIEGNKCVNKYIPGRT--------NKEYRMDNKERI 113
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BLAST of mRNA_D-dudresnayi_contig10575.651.1 vs. uniprot
Match: A0A1V0SJH4_9VIRU (Uncharacterized protein n=1 Tax=Klosneuvirus KNV1 TaxID=1977640 RepID=A0A1V0SJH4_9VIRU)

HSP 1 Score: 67.4 bits (163), Expect = 5.300e-10
Identity = 45/103 (43.69%), Postives = 67/103 (65.05%), Query Frame = 1 
Query:    1 MVNYGNGKIYKVEPVCEHVEGEIYIGSTTERYLSRRMDKHRSGYKLWQNNGTGGHVRSYDLFDKYGIENCRIILLETVHANSKDELESRESHYIQ-TLKCVNK 306
            MVNY NGKIYK+  +   ++ ++YIGSTT+  L  R+  HRS YK + +N  G ++ S++L  KY  ++ +IILLE     +K+EL S+E  +I  T +CVNK
Sbjct:    1 MVNYQNGKIYKI--ISNQID-KVYIGSTTQP-LCERLALHRSTYKRYTDN-KGHYMTSFELI-KY--DDAKIILLENYPCKNKEELCSKEQDWIDNTEQCVNK 95
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BLAST of mRNA_D-dudresnayi_contig10575.651.1 vs. uniprot
Match: A0A1V0SJS1_9VIRU (GIY-YIG domain-containing protein n=1 Tax=Klosneuvirus KNV1 TaxID=1977640 RepID=A0A1V0SJS1_9VIRU)

HSP 1 Score: 63.9 bits (154), Expect = 7.960e-9
Identity = 43/103 (41.75%), Postives = 59/103 (57.28%), Query Frame = 1 
Query:    1 MVNYGNGKIYKVEPVCEHVEGEIYIGSTTERYLSRRMDKHRSGYKLWQNNGTGGHVRSYDLFDKYGIENCRIILLETVHANSKDELESRESHYIQ-TLKCVNK 306
            MVNY NGKIYK+     +   E+Y+GSTT+  L  R   H+S YK +QN  T  +V S++L  KY  ++  IIL+E    +SK EL  +E      T  C+NK
Sbjct:    1 MVNYQNGKIYKI---VSNQTIEVYVGSTTDE-LKSRFSGHKSAYKQYQNKKTH-YVSSFELM-KY--DDASIILIENYPCDSKQELHKKEQDCKNNTPNCINK 95
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BLAST of mRNA_D-dudresnayi_contig10575.651.1 vs. uniprot
Match: A0A7D3UTE5_9VIRU (GIY-YIg endonuclease n=1 Tax=Fadolivirus 1 TaxID=2740746 RepID=A0A7D3UTE5_9VIRU)

HSP 1 Score: 63.5 bits (153), Expect = 8.790e-9
Identity = 42/123 (34.15%), Postives = 66/123 (53.66%), Query Frame = 1 
Query:    1 MVNYGNGKIYKVEPVCEHVEGEIYIGSTTERYLSRRMDKHRSGYKLWQNNGTGGHVRSYDLFDKYGIENCRIILLETVHANSKDELESRESHYIQ-TLKCVNKQIPLR-VKILGKNAYDKLYK 363
            MVNY NGKIYK+         E YIGSTT++ L++R   H S YK++       ++R     +     N  I+L+E    N++ EL +RE ++I  T  C+N+  P++    + +  Y K+YK
Sbjct:    1 MVNYTNGKIYKI---ISKNSNECYIGSTTDQ-LNKRFACHLSNYKMFNTK----NIRYCKSIEIIKCGNPEIVLIENFPCNNEYELRTRELYFINNTENCINELTPIKNTPKINRFHYSKIYK 115
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BLAST of mRNA_D-dudresnayi_contig10575.651.1 vs. uniprot
Match: A0A1V0SJ92_9VIRU (Uncharacterized protein n=1 Tax=Klosneuvirus KNV1 TaxID=1977640 RepID=A0A1V0SJ92_9VIRU)

HSP 1 Score: 59.3 bits (142), Expect = 3.250e-7
Identity = 38/93 (40.86%), Postives = 58/93 (62.37%), Query Frame = 1 
Query:    1 MVNYGNGKIYKVEPVCEHVEGEIYIGSTTERYLSRRMDKHRSGYKLWQNNGTGGHVRSYDLFDKYGIENCRIILLETVHANSKDELESRESHY 279
            MVNY NGKIYK+  V   ++ ++YIGST+   L +R+ KHR+ YK +   G   +  S+++  KY  E+ +IIL+E     +K EL +RE +Y
Sbjct:    1 MVNYANGKIYKI--VSTQLD-KVYIGSTSLE-LKKRLIKHRNNYKKYIREGCN-YASSFEIL-KY--EDAQIILIEDYPCTTKKELFNREQYY 85
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BLAST of mRNA_D-dudresnayi_contig10575.651.1 vs. uniprot
Match: A0A519QKX4_FLASP (GIY-YIG domain-containing protein n=1 Tax=Flavobacterium sp. TaxID=239 RepID=A0A519QKX4_FLASP)

HSP 1 Score: 54.7 bits (130), Expect = 4.530e-7
Identity = 27/63 (42.86%), Postives = 38/63 (60.32%), Query Frame = 1 
Query:    1 MVNYGNGKIYKVEPVCEHVEGEIYIGSTTERYLSRRMDKHRSGYKLWQNNGTGGHVRSYDLFD 189
            MVNY +GKIYK+    ++  G IYIGST E  L+RR+ KH+S YK +    +     S+ + D
Sbjct:    1 MVNYADGKIYKI---IDNTNGNIYIGSTAEPTLARRLAKHKSDYKRYLEGKSRYVTSSFGILD 60
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10575.651.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A0A0RJW0_9VIRU1.680e-2547.50GIY-YIG domain-containing protein n=1 Tax=Yellowst... [more]
A0A519RS11_FLASP4.450e-1942.97GIY-YIG domain-containing protein n=1 Tax=Flavobac... [more]
A0A1V0SJH4_9VIRU5.300e-1043.69Uncharacterized protein n=1 Tax=Klosneuvirus KNV1 ... [more]
A0A1V0SJS1_9VIRU7.960e-941.75GIY-YIG domain-containing protein n=1 Tax=Klosneuv... [more]
A0A7D3UTE5_9VIRU8.790e-934.15GIY-YIg endonuclease n=1 Tax=Fadolivirus 1 TaxID=2... [more]
A0A1V0SJ92_9VIRU3.250e-740.86Uncharacterized protein n=1 Tax=Klosneuvirus KNV1 ... [more]
A0A519QKX4_FLASP4.530e-742.86GIY-YIG domain-containing protein n=1 Tax=Flavobac... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10575contigD-dudresnayi_contig10575:7848..8369 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size522
Cds size522
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927561.9423916-CDS-D-dudresnayi_contig10575:7847..83691622927561.9423916-CDS-D-dudresnayi_contig10575:7847..8369Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10575 7848..8369 -
1690556808.2008274-CDS-D-dudresnayi_contig10575:7847..83691690556808.2008274-CDS-D-dudresnayi_contig10575:7847..8369Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10575 7848..8369 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10575.651.1prot_D-dudresnayi_contig10575.651.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10575 7848..8369 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10575.651.1

>prot_D-dudresnayi_contig10575.651.1 ID=prot_D-dudresnayi_contig10575.651.1|Name=mRNA_D-dudresnayi_contig10575.651.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=174bp
MVNYGNGKIYKVEPVCEHVEGEIYIGSTTERYLSRRMDKHRSGYKLWQNN
GTGGHVRSYDLFDKYGIENCRIILLETVHANSKDELESRESHYIQTLKCV
NKQIPLRVKILGKNAYDKLYKSENIEHIQNYQKVYNKIYQSKNKEYLKDY
WKKYEENNKEYLTDYRKQYREKSK
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mRNA from alignment at D-dudresnayi_contig10575:7848..8369-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10575.651.1 ID=mRNA_D-dudresnayi_contig10575.651.1|Name=mRNA_D-dudresnayi_contig10575.651.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=522bp|location=Sequence derived from alignment at D-dudresnayi_contig10575:7848..8369- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGTAAATTATGGCAACGGAAAAATTTATAAAGTCGAACCTGTTTGTGA
ACACGTCGAGGGTGAAATTTACATTGGATCTACTACTGAACGCTATTTGT
CTCGAAGGATGGACAAACATAGATCAGGTTATAAACTTTGGCAAAACAAT
GGTACAGGTGGACACGTCCGATCATATGATCTTTTTGATAAGTATGGAAT
TGAAAACTGTCGAATAATTTTATTAGAAACCGTTCATGCGAATAGTAAAG
ACGAATTAGAATCAAGAGAAAGTCACTATATTCAAACTTTGAAGTGTGTT
AACAAACAAATACCACTGCGTGTTAAAATTTTGGGGAAAAATGCTTACGA
CAAATTATATAAGAGTGAAAATATTGAACACATACAAAATTATCAAAAAG
TATATAATAAAATATACCAATCAAAGAATAAAGAATATTTAAAAGATTAT
TGGAAAAAATACGAGGAAAATAACAAAGAATATCTTACTGATTATCGAAA
GCAGTATCGAGAAAAAAGCAAA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10575:7848..8369-

>mRNA_D-dudresnayi_contig10575.651.1 ID=mRNA_D-dudresnayi_contig10575.651.1|Name=mRNA_D-dudresnayi_contig10575.651.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1044bp|location=Sequence derived from alignment at D-dudresnayi_contig10575:7848..8369- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGTAAATTATGGCAACGGAAAAATTTATAAAGTCGAACCTGTTTGTGA
ACACGTCGAGGGTGAAATTTACATTGGATCTACTACTGAACGCTATTTGT
CTCGAAGGATGGACAAACATAGATCAGGTTATAAACTTTGGCAAAACAAT
GGTACAGGTGGACACGTCCGATCATATGATCTTTTTGATAAGTATGGAAT
TGAAAACTGTCGAATAATTTTATTAGAAACCGTTCATGCGAATAGTAAAG
ACGAATTAGAATCAAGAGAAAGTCACTATATTCAAACTTTGAAGTGTGTT
AACAAACAAATACCACTGCGTGTTAAAATTTTGGGGAAAAATGCTTACGA
CAAATTATATAAGAGTGAAAATATTGAACACATACAAAATTATCAAAAAG
TATATAATAAAATATACCAATCAAAGAATAAAGAATATTTAAAAGATTAT
TGGAAAAAATACGAGGAAAATAACAAAGAATATCTTACTGATTATCGAAA
GCAGTATCGAGAAAAAAGCAAAATGGTAAATTATGGCAACGGAAAAATTT
ATAAAGTCGAACCTGTTTGTGAACACGTCGAGGGTGAAATTTACATTGGA
TCTACTACTGAACGCTATTTGTCTCGAAGGATGGACAAACATAGATCAGG
TTATAAACTTTGGCAAAACAATGGTACAGGTGGACACGTCCGATCATATG
ATCTTTTTGATAAGTATGGAATTGAAAACTGTCGAATAATTTTATTAGAA
ACCGTTCATGCGAATAGTAAAGACGAATTAGAATCAAGAGAAAGTCACTA
TATTCAAACTTTGAAGTGTGTTAACAAACAAATACCACTGCGTGTTAAAA
TTTTGGGGAAAAATGCTTACGACAAATTATATAAGAGTGAAAATATTGAA
CACATACAAAATTATCAAAAAGTATATAATAAAATATACCAATCAAAGAA
TAAAGAATATTTAAAAGATTATTGGAAAAAATACGAGGAAAATAACAAAG
AATATCTTACTGATTATCGAAAGCAGTATCGAGAAAAAAGCAAA
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