mRNA_D-dudresnayi_contig10574.650.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10574.650.1 vs. uniprot
Match: A0A6H5KLE6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLE6_9PHAE) HSP 1 Score: 111 bits (278), Expect = 5.730e-28 Identity = 55/105 (52.38%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 1 EPASYSAARSSAYSDVRLTAMSMELDGLVAAGTFTEVSELPEGCNAVNAKWLYKWKGDSNGKVKRVKAPTVAMGYSQVEGVDYFETFAPTASATSNRLVAALACQ 315 EP+SY+ AR S YS + A+S E GL+ AGTF ++P GCN ++A+W+YKWK + GK+ + KA VA G+ Q GVDYFETF+PTA A S RL+ ALAC+ Sbjct: 14 EPSSYNEARQSKYSSIWDKAISAEFGGLLRAGTFALAVKIPIGCNVIDARWVYKWKANETGKILKAKARLVAKGFKQKHGVDYFETFSPTAHAASIRLLVALACK 118
BLAST of mRNA_D-dudresnayi_contig10574.650.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE) HSP 1 Score: 114 bits (285), Expect = 2.340e-27 Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 1 EPASYSAARSSAYSDVRLTAMSMELDGLVAAGTFTEVSELPEGCNAVNAKWLYKWKGDSNGKVKRVKAPTVAMGYSQVEGVDYFETFAPTASATSNRLVAALACQ 315 EP SY A S ++ + AMS E++GL+ AGTFT +++PEGCN ++A+W++KWK D GK+ + KA VA G+ Q GVDY ETF+PTA+A S RLV ALAC+ Sbjct: 212 EPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACK 316
BLAST of mRNA_D-dudresnayi_contig10574.650.1 vs. uniprot
Match: A0A6H5LDZ0_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDZ0_9PHAE) HSP 1 Score: 114 bits (285), Expect = 2.430e-27 Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 1 EPASYSAARSSAYSDVRLTAMSMELDGLVAAGTFTEVSELPEGCNAVNAKWLYKWKGDSNGKVKRVKAPTVAMGYSQVEGVDYFETFAPTASATSNRLVAALACQ 315 EP SY A S ++ + AMS E++GL+ AGTFT +++PEGCN ++A+W++KWK D GK+ + KA VA G+ Q GVDY ETF+PTA+A S RLV ALAC+ Sbjct: 417 EPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACK 521
BLAST of mRNA_D-dudresnayi_contig10574.650.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE) HSP 1 Score: 114 bits (285), Expect = 2.440e-27 Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 1 EPASYSAARSSAYSDVRLTAMSMELDGLVAAGTFTEVSELPEGCNAVNAKWLYKWKGDSNGKVKRVKAPTVAMGYSQVEGVDYFETFAPTASATSNRLVAALACQ 315 EP SY A S ++ + AMS E++GL+ AGTFT +++PEGCN ++A+W++KWK D GK+ + KA VA G+ Q GVDY ETF+PTA+A S RLV ALAC+ Sbjct: 481 EPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACK 585
BLAST of mRNA_D-dudresnayi_contig10574.650.1 vs. uniprot
Match: A0A6H5KHE8_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE8_9PHAE) HSP 1 Score: 114 bits (285), Expect = 2.440e-27 Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 1 EPASYSAARSSAYSDVRLTAMSMELDGLVAAGTFTEVSELPEGCNAVNAKWLYKWKGDSNGKVKRVKAPTVAMGYSQVEGVDYFETFAPTASATSNRLVAALACQ 315 EP SY A S ++ + AMS E++GL+ AGTFT +++PEGCN ++A+W++KWK D GK+ + KA VA G+ Q GVDY ETF+PTA+A S RLV ALAC+ Sbjct: 625 EPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACK 729
BLAST of mRNA_D-dudresnayi_contig10574.650.1 vs. uniprot
Match: A0A6H5K622_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K622_9PHAE) HSP 1 Score: 114 bits (285), Expect = 2.460e-27 Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 1 EPASYSAARSSAYSDVRLTAMSMELDGLVAAGTFTEVSELPEGCNAVNAKWLYKWKGDSNGKVKRVKAPTVAMGYSQVEGVDYFETFAPTASATSNRLVAALACQ 315 EP SY A S ++ + AMS E++GL+ AGTFT +++PEGCN ++A+W++KWK D GK+ + KA VA G+ Q GVDY ETF+PTA+A S RLV ALAC+ Sbjct: 831 EPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACK 935
BLAST of mRNA_D-dudresnayi_contig10574.650.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE) HSP 1 Score: 112 bits (279), Expect = 1.590e-26 Identity = 54/104 (51.92%), Postives = 75/104 (72.12%), Query Frame = 1 Query: 4 PASYSAARSSAYSDVRLTAMSMELDGLVAAGTFTEVSELPEGCNAVNAKWLYKWKGDSNGKVKRVKAPTVAMGYSQVEGVDYFETFAPTASATSNRLVAALACQ 315 P SY A+ S Y+ + AMS E++GL+ AGTFT +++P GCN ++A+W++KWK D GK+ + KA VA G+ Q GVDY ETF+PTA+A S+RLV ALAC+ Sbjct: 715 PDSYQEAQRSKYAKIWEGAMSAEVEGLIRAGTFTLAAKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACK 818
BLAST of mRNA_D-dudresnayi_contig10574.650.1 vs. uniprot
Match: A0A6H5JP36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP36_9PHAE) HSP 1 Score: 111 bits (277), Expect = 2.910e-26 Identity = 53/105 (50.48%), Postives = 74/105 (70.48%), Query Frame = 1 Query: 1 EPASYSAARSSAYSDVRLTAMSMELDGLVAAGTFTEVSELPEGCNAVNAKWLYKWKGDSNGKVKRVKAPTVAMGYSQVEGVDYFETFAPTASATSNRLVAALACQ 315 EP SY A + ++ + AM E++GL+ AGTFT +++PEGCN ++A+W++KWK D GK+ + KA VA G+ Q GVDY ETF+PTA+A S RLV ALAC+ Sbjct: 145 EPGSYQEALRAKHATIWDKAMCAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACK 249
BLAST of mRNA_D-dudresnayi_contig10574.650.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE) HSP 1 Score: 110 bits (274), Expect = 7.580e-26 Identity = 54/105 (51.43%), Postives = 74/105 (70.48%), Query Frame = 1 Query: 1 EPASYSAARSSAYSDVRLTAMSMELDGLVAAGTFTEVSELPEGCNAVNAKWLYKWKGDSNGKVKRVKAPTVAMGYSQVEGVDYFETFAPTASATSNRLVAALACQ 315 EP SY AR S ++ + AMS E++GL+ AGTFT ++P GCN ++A+W++KWK D GK+ + KA VA G+ Q GVDY ETF+PTA+A S RL+ ALAC+ Sbjct: 779 EPGSYQEARQSKHAAIWDGAMSAEVEGLIRAGTFTLAVKIPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFRQKYGVDYLETFSPTANAASIRLLVALACK 883
BLAST of mRNA_D-dudresnayi_contig10574.650.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE) HSP 1 Score: 109 bits (273), Expect = 1.010e-25 Identity = 53/104 (50.96%), Postives = 74/104 (71.15%), Query Frame = 1 Query: 4 PASYSAARSSAYSDVRLTAMSMELDGLVAAGTFTEVSELPEGCNAVNAKWLYKWKGDSNGKVKRVKAPTVAMGYSQVEGVDYFETFAPTASATSNRLVAALACQ 315 P SY A+ S Y+ + AMS E++GL+ AGTFT +++P CN ++A+W++KWK D GK+ + KA VA G+ Q GVDY ETF+PTA+A S+RLV ALAC+ Sbjct: 448 PDSYQEAQRSKYAKIWEGAMSAEVEGLIRAGTFTLAAKVPISCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACK 551 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10574.650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10574.650.1 >prot_D-dudresnayi_contig10574.650.1 ID=prot_D-dudresnayi_contig10574.650.1|Name=mRNA_D-dudresnayi_contig10574.650.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=105bp EPASYSAARSSAYSDVRLTAMSMELDGLVAAGTFTEVSELPEGCNAVNAKback to top mRNA from alignment at D-dudresnayi_contig10574:318..632- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10574.650.1 ID=mRNA_D-dudresnayi_contig10574.650.1|Name=mRNA_D-dudresnayi_contig10574.650.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=315bp|location=Sequence derived from alignment at D-dudresnayi_contig10574:318..632- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10574:318..632- >mRNA_D-dudresnayi_contig10574.650.1 ID=mRNA_D-dudresnayi_contig10574.650.1|Name=mRNA_D-dudresnayi_contig10574.650.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=630bp|location=Sequence derived from alignment at D-dudresnayi_contig10574:318..632- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |