mRNA_D-dudresnayi_contig10573.649.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10573.649.1
Unique NamemRNA_D-dudresnayi_contig10573.649.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10573.649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10573contigD-dudresnayi_contig10573:7616..8267 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-13_001570.1
Exons1
Model size653
Cds size651
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927561.8672068-CDS-D-dudresnayi_contig10573:7615..82661622927561.8672068-CDS-D-dudresnayi_contig10573:7615..8266Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10573 7616..8266 +
1690556808.1831248-CDS-D-dudresnayi_contig10573:7615..82661690556808.1831248-CDS-D-dudresnayi_contig10573:7615..8266Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10573 7616..8266 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10573.649.1prot_D-dudresnayi_contig10573.649.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10573 7616..8266 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10573.649.1

>prot_D-dudresnayi_contig10573.649.1 ID=prot_D-dudresnayi_contig10573.649.1|Name=mRNA_D-dudresnayi_contig10573.649.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=217bp
GSGGGAGTEEVSKMPAPTTSSSSMRRKSTAMHGVGLAGMSDLSRIPEGEY
SEERSSTLLSCSSGPLSSLSPRVSLSGSFINSHGSEAGGGGYAASRAGWL
RPRTPGAANASRHTNMETPRTALETPGADWRELGRGDGDGITGDYPDLRS
PNQPPRSWGGCSTIKRSAEDAGDRVMRQRGEDGDSIVLDRSRRLSTTDDS
SLGWIGSEIGVRKTPRA
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mRNA from alignment at D-dudresnayi_contig10573:7616..8267+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10573.649.1 ID=mRNA_D-dudresnayi_contig10573.649.1|Name=mRNA_D-dudresnayi_contig10573.649.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=652bp|location=Sequence derived from alignment at D-dudresnayi_contig10573:7616..8267+ (Desmarestia dudresnayi DdudBR16 monoicous)
GGGTCAGGGGGGGGTGCAGGAACCGAGGAGGTCAGCAAAATGCCCGCACC
AACAACATCTTCCTCGAGTATGAGAAGGAAGAGTACCGCCATGCACGGGG
TAGGCTTGGCGGGGATGTCGGATTTGTCCCGCATCCCCGAAGGGGAATAT
TCTGAGGAACGTTCATCTACGTTGCTGTCGTGCTCGTCCGGTCCGTTGTC
GTCGCTGTCTCCCCGGGTATCGTTATCGGGTTCTTTTATTAATAGTCATG
GGTCGGAAGCGGGAGGGGGGGGGTACGCGGCTTCGCGAGCTGGGTGGCTG
CGTCCCCGTACCCCTGGTGCGGCCAACGCCTCCAGGCATACCAATATGGA
AACCCCTAGGACGGCACTTGAAACCCCGGGCGCTGATTGGCGAGAACTCG
GCCGAGGCGATGGAGACGGGATTACGGGAGACTACCCTGACCTACGGAGT
CCGAACCAGCCTCCCAGGTCGTGGGGAGGGTGTTCCACGATAAAGCGGAG
TGCGGAGGACGCCGGGGATAGGGTGATGCGCCAGCGGGGGGAAGATGGGG
ACAGCATTGTGCTGGATAGGAGCCGTCGGTTGTCGACGACTGATGATTCG
TCTTTGGGTTGGATTGGGAGTGAGATCGGGGTGAGAAAGACTCCGCGCGC
GG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10573:7616..8267+

>mRNA_D-dudresnayi_contig10573.649.1 ID=mRNA_D-dudresnayi_contig10573.649.1|Name=mRNA_D-dudresnayi_contig10573.649.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1302bp|location=Sequence derived from alignment at D-dudresnayi_contig10573:7616..8267+ (Desmarestia dudresnayi DdudBR16 monoicous)
GGGTCAGGGGGGGGTGCAGGAACCGAGGAGGTCAGCAAAATGCCCGCACC
AACAACATCTTCCTCGAGTATGAGAAGGAAGAGTACCGCCATGCACGGGG
TAGGCTTGGCGGGGATGTCGGATTTGTCCCGCATCCCCGAAGGGGAATAT
TCTGAGGAACGTTCATCTACGTTGCTGTCGTGCTCGTCCGGTCCGTTGTC
GTCGCTGTCTCCCCGGGTATCGTTATCGGGTTCTTTTATTAATAGTCATG
GGTCGGAAGCGGGAGGGGGGGGGTACGCGGCTTCGCGAGCTGGGTGGCTG
CGTCCCCGTACCCCTGGTGCGGCCAACGCCTCCAGGCATACCAATATGGA
AACCCCTAGGACGGCACTTGAAACCCCGGGCGCTGATTGGCGAGAACTCG
GCCGAGGCGATGGAGACGGGATTACGGGAGACTACCCTGACCTACGGAGT
CCGAACCAGCCTCCCAGGTCGTGGGGAGGGTGTTCCACGATAAAGCGGAG
TGCGGAGGACGCCGGGGATAGGGTGATGCGCCAGCGGGGGGAAGATGGGG
ACAGCATTGTGCTGGATAGGAGCCGTCGGTTGTCGACGACTGATGATTCG
TCTTTGGGTTGGATTGGGAGTGAGATCGGGGTGAGAAAGACTCCGCGCGC
GGGGTCAGGGGGGGGTGCAGGAACCGAGGAGGTCAGCAAAATGCCCGCAC
CAACAACATCTTCCTCGAGTATGAGAAGGAAGAGTACCGCCATGCACGGG
GTAGGCTTGGCGGGGATGTCGGATTTGTCCCGCATCCCCGAAGGGGAATA
TTCTGAGGAACGTTCATCTACGTTGCTGTCGTGCTCGTCCGGTCCGTTGT
CGTCGCTGTCTCCCCGGGTATCGTTATCGGGTTCTTTTATTAATAGTCAT
GGGTCGGAAGCGGGAGGGGGGGGGTACGCGGCTTCGCGAGCTGGGTGGCT
GCGTCCCCGTACCCCTGGTGCGGCCAACGCCTCCAGGCATACCAATATGG
AAACCCCTAGGACGGCACTTGAAACCCCGGGCGCTGATTGGCGAGAACTC
GGCCGAGGCGATGGAGACGGGATTACGGGAGACTACCCTGACCTACGGAG
TCCGAACCAGCCTCCCAGGTCGTGGGGAGGGTGTTCCACGATAAAGCGGA
GTGCGGAGGACGCCGGGGATAGGGTGATGCGCCAGCGGGGGGAAGATGGG
GACAGCATTGTGCTGGATAGGAGCCGTCGGTTGTCGACGACTGATGATTC
GTCTTTGGGTTGGATTGGGAGTGAGATCGGGGTGAGAAAGACTCCGCGCG
CG
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