mRNA_D-dudresnayi_contig1057.642.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig1057.642.1
Unique NamemRNA_D-dudresnayi_contig1057.642.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig1057.642.1 vs. uniprot
Match: A0A6H5JJB7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJB7_9PHAE)

HSP 1 Score: 355 bits (910), Expect = 2.910e-117
Identity = 197/258 (76.36%), Postives = 213/258 (82.56%), Query Frame = 1 
Query:  481 RSQSRML-RWAMPGAAGAGLGRGFSFAFRRAKMDDEEEADEXXXXXXXXXXXXYD-EQGLDRNIAKRLKRSATIFRQVSWLSWWAQTILSTVALTILLFSNAVTNRSARGNILGNGVALALGSLACSAASVCWTWGYTLKAKGWRQLGTLAELDDAQVRMRNSLKMGLYINVAGMLLALVGAEQIVGTLVAKVLYAQGFQPSVMVGATGAAEVAQSQFRALDVFIVQANTNTLLSHFCSLAASLWLLERTPKLAKLAK 1248
            R Q R+L RW  PGAA  G   G   +  R    +E+E +E             D E+ LDR++ K+LKRS T+FRQVSWLSWWAQTILSTVA  ILLFSNAVTNRSARGNILGNGVALA+ SLACSAAS+CWTWGY LKAKGWR LGTLAE+DDAQVRMR SL+MGLYINVAGMLLALVGAEQIVGTLVAKVLYAQGFQPSVMVG+ GAAEVAQ+QFRALDVFIVQANTNTLLSHFCSLAASLWLL RTPKLAKLAK
Sbjct:   67 RRQQRILPRWVRPGAAARGGLFGRVPSRLRGVAAEEDEGEEMYEYDDVDGEEYNDGEEILDRSVIKQLKRSTTVFRQVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALAVASLACSAASICWTWGYNLKAKGWRNLGTLAEVDDAQVRMRGSLRMGLYINVAGMLLALVGAEQIVGTLVAKVLYAQGFQPSVMVGSAGAAEVAQAQFRALDVFIVQANTNTLLSHFCSLAASLWLLARTPKLAKLAK 324
[Close]
BLAST of mRNA_D-dudresnayi_contig1057.642.1 vs. uniprot
Match: A0A836CL61_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL61_9STRA)

HSP 1 Score: 176 bits (446), Expect = 2.950e-48
Identity = 104/194 (53.61%), Postives = 132/194 (68.04%), Query Frame = 1 
Query:  673 RLKRSATIFRQVSWLSWWAQTILSTVALTILLFSNAVTNRSARGNILGNGVALALGSLACSAASVCWTWGYTLKAKGW--RQLGTLAELDDAQVRMRNSLKMGLYINVAGMLLALVGAEQIVGTLVAKVLYAQGFQPSVMVGATGAAEVAQSQFRALDVFIVQANTNTLLSHFCSLAASLWLLERTPKLAKLAK 1248
            RLK  A+ F+++ W SWW+QTILSTV+  I+LFSNA+T RS RGN LGNGV LA  ++A + AS+ WTW   LKA  W  R     +   +AQ  +  +LK+G++IN+ G L ALVGAEQIVGTLVAKVLY+ G     +V ++     A  QFRALD+FI+QANTNTLLSHF SLA +L LL R   L  + K
Sbjct:   96 RLKLGASNFQRLGWFSWWSQTILSTVSAIIILFSNAITERSVRGNALGNGVFLAGLAVASAGASMFWTWTLILKATAWVGRNEKKRSTPTEAQRNIIRALKVGVWINLLGALFALVGAEQIVGTLVAKVLYSGGITQGQVVASS---IPATQQFRALDIFIIQANTNTLLSHFVSLAINLLLLARARTLTMIPK 286
[Close]
BLAST of mRNA_D-dudresnayi_contig1057.642.1 vs. uniprot
Match: A0A7S2V450_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V450_9STRA)

HSP 1 Score: 151 bits (382), Expect = 4.100e-39
Identity = 90/194 (46.39%), Postives = 121/194 (62.37%), Query Frame = 1 
Query:  670 KRLKRSATIFRQVSWLSWWAQTILSTVALTILLFSNAVTNRSARGNILGNGVALALGSLACSAASVCWTWGYTLKAKGWRQLGTLAELDDAQVRMRNSLKMGLYINVAGMLLALVGAEQIVGTLVAKVLYAQ-----GFQPSVMVGATGAAEVAQSQFRALDVFIVQANTNTLLSHFCSLAASLWLLERTPKLA 1236
            +R+ + +  F++++W+SWW Q IL+TVA  IL F+ AVT+   R N L NG  LA   +     S+ WTWG    A+ W++  T  +LD A   M N LK  + IN+ GML+ALVGAEQIVGTLVAK+L  Q     G    +  G +G        F+ALD+F+VQANTNT+L+HF SLAASLWL  R  +L+
Sbjct:   79 RRIWKLSNYFQRIAWISWWTQVILTTVAGVILFFTTAVTDPG-RANFLVNGTFLAGCGVTLGLISIFWTWGIARAARRWKRRST--DLDQACASMGNRLKAAVLINLMGMLVALVGAEQIVGTLVAKILQTQTVQQFGMSQVIQAGGSGI-------FQALDIFVVQANTNTILAHFSSLAASLWLQTRFRRLS 262
[Close]
BLAST of mRNA_D-dudresnayi_contig1057.642.1 vs. uniprot
Match: A0A7S3XU47_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU47_HETAK)

HSP 1 Score: 144 bits (362), Expect = 1.170e-35
Identity = 88/194 (45.36%), Postives = 117/194 (60.31%), Query Frame = 1 
Query:  670 KRLKRSATIFRQVSWLSWWAQTILSTVALTILLFSNAVTNRSARGNILGNGVALALGSLACSAASVCWTWGYTLKAKGWRQLGTLAELDDAQVRMRNSLKMGLYINVAGMLLALVGAEQIVGTLVAKVLYAQGFQPSVMVGATGAAE-----VAQSQFRALDVFIVQANTNTLLSHFCSLAASLWLLERTPKLA 1236
            KR++  +  F+  +W SWWAQ ILSTVA  IL F++A+T+   R N+  NG  LA   +     S  WTWGY   AK W++ G  A+L+  Q  M   L+ G ++N  GM +AL GAEQIVGTLVAKVL AQG  P +   A G A      + Q   +ALD+F+VQANTN+++SH C L   L+L  R  +LA
Sbjct:   96 KRIRNLSNGFQNAAWTSWWAQVILSTVAGVILFFASAITDP--RVNMFMNGTLLAGCGVFFGLVSTFWTWGYASAAKRWKRPG--ADLEKLQRAMLRRLEFGHFVNTLGMAVALTGAEQIVGTLVAKVLSAQGLSPFLGGAAVGYAAGQPLVLPQGAVQALDIFVVQANTNSVVSHLCGLLTVLYLRGRARRLA 285
[Close]
BLAST of mRNA_D-dudresnayi_contig1057.642.1 vs. uniprot
Match: A0A4D9D048_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D048_9STRA)

HSP 1 Score: 130 bits (328), Expect = 3.490e-31
Identity = 78/198 (39.39%), Postives = 113/198 (57.07%), Query Frame = 1 
Query:  676 LKRSATIFRQVSWLSWWAQTILSTVALTILLFSNAVTNRSARG------NILGNGVALALGSLACSAASVCWTWGYTLKAKGWRQLGTLAELDDAQVRMRNSLKMGLYINVAGMLLALVGAEQIVGTLVAKVLYAQGFQPSVMVGATGAAEVAQSQFRALDVFIVQANTNTLLSHFCSLAASLWLLERTPKLAKLAKG 1251
            L++ +      +W SWWAQ I +TVA  IL F+N+    S  G      +I  NG   A   L   A S+ WTWG+T  AK  R+   + E   +   +R  ++  + IN+ G+L AL+GAEQ VG L+A+VL  QGF P V+  +     +A    + +D+F++QANTN LLSHF SL +SL LL R  K+++ A+G
Sbjct:   94 LRQYSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVAPSGGGPSLAAKSIFSNGYIFAASGLCLGAISIFWTWGFTGVAKRIRR--AVLEPPTSLAMVRRVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINQSAMGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSKISRAARG 289
[Close]
BLAST of mRNA_D-dudresnayi_contig1057.642.1 vs. uniprot
Match: A0A7S1XJJ2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJJ2_9STRA)

HSP 1 Score: 120 bits (302), Expect = 3.420e-28
Identity = 80/184 (43.48%), Postives = 109/184 (59.24%), Query Frame = 1 
Query:  673 RLKRSATIFRQVSWLSWWAQTILSTVALTILLFSNAVTNRSARGNILGNGVA----LALGSLACSAASVCWTWGYTLKAKGWRQLGTLAELDDAQVRMRNSLKMGLYINVAGMLLALVGAEQIVGTLVAKVLYAQGFQPSVMVGATGAAEVAQSQFRALDVFIVQANTNTLLSHFCSLAASLWL 1212
            RL+ +  ++R   W SWW QT+L+ +A   LLF+      +     + +G A    LA   ++ SA SV WTWG+T  A+  R+   L    +A++ +R +L+ G+ +N+ GM   L GAEQIVGTLVAKVL  QG    V   A GA     +  +ALD+FIVQANTNTLLSH CSL  +LWL
Sbjct:   19 RLETAKKLWR-AGWTSWWIQTVLTVIASITLLFARTFAAAAGGSTAIQSGGAGGLFLAGLGVSLSALSVFWTWGFTRVARRLRKGEDLTPRLEARL-IRRALRTGIVLNLVGMFATLFGAEQIVGTLVAKVLSFQG----VTGPAAGAYVAPTATLQALDIFIVQANTNTLLSHLCSLTITLWL 196
[Close]
BLAST of mRNA_D-dudresnayi_contig1057.642.1 vs. uniprot
Match: A0A0M0JU81_9EUKA (Copper uptake transmembrane transporter n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JU81_9EUKA)

HSP 1 Score: 114 bits (285), Expect = 3.840e-26
Identity = 78/171 (45.61%), Postives = 101/171 (59.06%), Query Frame = 1 
Query:  706 VSWLSWWAQTILSTVALTILLFSNAVTNRSARGNILGNGVALALGSLACSAASVCWTWGYTLKAKGWRQLG--TLAELDDAQVRMRNSLKMGLYINVAGMLLALVGAEQIVGTLVAKVLYAQGFQPSVMVGATGAAEVAQSQFRALDVFIVQANTNTLLSHFCSLAASLWL 1212
            + W+SWW+Q ILST++  +LLF+N VT R     ILG   AL LG L  + AS  WT  Y   A   R+LG  T    +DA  R  N   +G ++N+ GM+L L+GAE IVGTL AK L     Q +     TG+     S  +ALD+ IVQANTNTLL+HF SL A++ L
Sbjct:   20 IGWVSWWSQAILSTISAVLLLFANTVTVRPTALTILGR--ALTLGGLVAAIASTLWTVAYGRLA---RRLGRATPPTAEDAAERAANIATVGTWLNIVGMVLCLLGAEAIVGTLAAKAL-----QSTSGTAITGS--FIPSPVQALDLLIVQANTNTLLAHFISLCANMRL 178
[Close]
BLAST of mRNA_D-dudresnayi_contig1057.642.1 vs. uniprot
Match: A0A7S0ITD5_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0ITD5_9EUKA)

HSP 1 Score: 115 bits (287), Expect = 4.660e-26
Identity = 77/168 (45.83%), Postives = 102/168 (60.71%), Query Frame = 1 
Query:  712 WLSWWAQTILSTVALTILLFSNAVTNRSARGNILGNGVALALGSLACSAASVCWTWGYT-LKAKGWRQLGTLAELDDAQVRMRNSLKMGLYINVAGMLLALVGAEQIVGTLVAKVLYAQGFQPSVMVGATGAAEVAQSQFRALDVFIVQANTNTLLSHFCSLAASLWL 1212
            WLSWW QTILS +A  ILLF N+V+ +S     L  G +LA  +LA S  S  WTWGYT L  +  R+L T A   DA  R+  SL++G+ +N+ G+  A++GAE IVGTL AK    QG    + +G         S  +A+DV +VQANTNTL +HF +L AS+ L
Sbjct:   58 WLSWWTQTILSVIAAVILLFVNSVSQQSLNLPALA-GRSLAFVALAGSVVSNFWTWGYTRLSKRLGRKLPTAA---DAAARVSGSLRVGVVVNLLGICFAILGAEAIVGTLAAKAFTTQG---QLALGGVA------SPVQAIDVLVVQANTNTLAAHFAALIASMRL 212
[Close]
BLAST of mRNA_D-dudresnayi_contig1057.642.1 vs. uniprot
Match: A0A7S4C3B6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C3B6_CHRCT)

HSP 1 Score: 113 bits (283), Expect = 4.520e-25
Identity = 74/166 (44.58%), Postives = 101/166 (60.84%), Query Frame = 1 
Query:  712 WLSWWAQTILSTVALTILLFSNAVTNRSARGNILGNGVALALGSLACSAASVCWTWGYT-LKAKGWRQLGTLAELDDAQVRMRNSLKMGLYINVAGMLLALVGAEQIVGTLVAKVLYAQGFQPSVMVGATGAAEVAQSQFRALDVFIVQANTNTLLSHFCSLAASL 1206
            W+SWW+QTILS +A  IL+F+N V+   A   ++G  V LA+ +L  SA S  WTW YT + A+  R++ T A   DA  R   +L +G+ IN+ G+ L+++GAE IVG L AK L   G      V   GAA   Q    A+D+ IVQANTNT+ SHF SL A++
Sbjct:  102 WISWWSQTILSVIAAVILIFANTVSQIPASAPVIGGRV-LAVSALGASAVSNFWTWSYTRISARFGRKMPTPA---DASSRATGALAVGIAINLVGIALSILGAEAIVGILAAKTLTQSG------VALAGAAAPVQ----AIDMLIVQANTNTMASHFISLCAAM 253
[Close]
BLAST of mRNA_D-dudresnayi_contig1057.642.1 vs. uniprot
Match: L1JCY2_GUITC (Translocon at the inner envelope membrane of chloroplast 21 like protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JCY2_GUITC)

HSP 1 Score: 110 bits (276), Expect = 7.370e-25
Identity = 83/200 (41.50%), Postives = 112/200 (56.00%), Query Frame = 1 
Query:  700 RQVSWLSWWAQTILSTVALTILLFSNAVTNRSARGNILGNGVALALGSLACSAASVCWTWGYTLKAKGWRQLGTLAELDDAQVRMRN---SLKMGLYINVAGMLLALVGAEQIVGTLVAKVLYAQGFQPSVMVGATG--AAEVAQSQ-------------------FRALDVFIVQANTNTLLSHFCSLAASLWLLERTP 1227
            RQ SWLSWWAQ ILS ++   L F+NAV     +GNIL NGV +A   LA S  +V WT GY   A   +QL    E  +A +  R+   ++++G+ + + GM L L+GAEQIVGTLVAK         S+++   G  AA+ A  Q                   ++ALD+F+VQANTNTLLSH  SL  SL++  + P
Sbjct:    2 RQSSWLSWWAQVILSVISAITLFFANAVRGPM-QGNILANGVFMAGLGLALSFINVIWTTGYQRIAA--KQL----ETPEAAMSFRSFSRTVRVGVIVALTGMFLTLLGAEQIVGTLVAK-----SISGSILIANGGGIAAQTASLQLQVCSFIDPRQLGFRTECCWQALDIFVVQANTNTLLSHLSSLVNSLFIASQIP 189
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1057.642.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJB7_9PHAE2.910e-11776.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CL61_9STRA2.950e-4853.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V450_9STRA4.100e-3946.39Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XU47_HETAK1.170e-3545.36Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A4D9D048_9STRA3.490e-3139.39Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S1XJJ2_9STRA3.420e-2843.48Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A0M0JU81_9EUKA3.840e-2645.61Copper uptake transmembrane transporter n=1 Tax=Ch... [more]
A0A7S0ITD5_9EUKA4.660e-2645.83Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S4C3B6_CHRCT4.520e-2544.58Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
L1JCY2_GUITC7.370e-2541.50Translocon at the inner envelope membrane of chlor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig1057contigD-dudresnayi_contig1057:25277..30634 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score110.5
Seed ortholog evalue1.5e-21
Seed eggNOG ortholog2850.Phatr49226
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006605,GO:0006810,GO:0006873,GO:0006875,GO:0006886,GO:0008104,GO:0008150,GO:0009507,GO:0009526,GO:0009528,GO:0009536,GO:0009706,GO:0009941,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0017038,GO:0019725,GO:0019866,GO:0030003,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0033036,GO:0033365,GO:0034613,GO:0042170,GO:0042592,GO:0042802,GO:0042803,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045036,GO:0045037,GO:0045184,GO:0046907,GO:0046983,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055065,GO:0055080,GO:0055082,GO:0055085,GO:0065002,GO:0065007,GO:0065008,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0072594,GO:0072596,GO:0072598,GO:0098771
EggNOG free text desc.Protein of unknown function (DUF3611)
EggNOG OGs28KUA@1,2QTAI@2759,2XGTY@2836
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionChloroplast inner membrane protein TIC 21
Ec32 orthologEc-12_006410.1
Exons5
Model size1334
Cds size1038
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927561.3722243-UTR-D-dudresnayi_contig1057:25276..254981622927561.3722243-UTR-D-dudresnayi_contig1057:25276..25498Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1057 25277..25498 +
1690556807.9511492-UTR-D-dudresnayi_contig1057:25276..254981690556807.9511492-UTR-D-dudresnayi_contig1057:25276..25498Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1057 25277..25498 +
1622927561.4633625-UTR-D-dudresnayi_contig1057:30560..306341622927561.4633625-UTR-D-dudresnayi_contig1057:30560..30634Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1057 30561..30634 +
1690556808.0060608-UTR-D-dudresnayi_contig1057:30560..306341690556808.0060608-UTR-D-dudresnayi_contig1057:30560..30634Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1057 30561..30634 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927561.3837955-CDS-D-dudresnayi_contig1057:25498..259351622927561.3837955-CDS-D-dudresnayi_contig1057:25498..25935Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1057 25499..25935 +
1690556807.9619431-CDS-D-dudresnayi_contig1057:25498..259351690556807.9619431-CDS-D-dudresnayi_contig1057:25498..25935Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1057 25499..25935 +
1622927561.3983283-CDS-D-dudresnayi_contig1057:27867..279131622927561.3983283-CDS-D-dudresnayi_contig1057:27867..27913Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1057 27868..27913 +
1690556807.9709034-CDS-D-dudresnayi_contig1057:27867..279131690556807.9709034-CDS-D-dudresnayi_contig1057:27867..27913Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1057 27868..27913 +
1622927561.414721-CDS-D-dudresnayi_contig1057:28291..284581622927561.414721-CDS-D-dudresnayi_contig1057:28291..28458Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1057 28292..28458 +
1690556807.979827-CDS-D-dudresnayi_contig1057:28291..284581690556807.979827-CDS-D-dudresnayi_contig1057:28291..28458Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1057 28292..28458 +
1622927561.4292448-CDS-D-dudresnayi_contig1057:29965..301591622927561.4292448-CDS-D-dudresnayi_contig1057:29965..30159Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1057 29966..30159 +
1690556807.9888964-CDS-D-dudresnayi_contig1057:29965..301591690556807.9888964-CDS-D-dudresnayi_contig1057:29965..30159Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1057 29966..30159 +
1622927561.4458969-CDS-D-dudresnayi_contig1057:30366..305601622927561.4458969-CDS-D-dudresnayi_contig1057:30366..30560Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1057 30367..30560 +
1690556807.9976115-CDS-D-dudresnayi_contig1057:30366..305601690556807.9976115-CDS-D-dudresnayi_contig1057:30366..30560Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1057 30367..30560 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig1057.642.1prot_D-dudresnayi_contig1057.642.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig1057 25499..30560 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig1057.642.1

>prot_D-dudresnayi_contig1057.642.1 ID=prot_D-dudresnayi_contig1057.642.1|Name=mRNA_D-dudresnayi_contig1057.642.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=346bp
MRTVQMGACAALCAAASFHEGCVVAAFATSTSARYAIRPSSLLCPGAKNN
VQAVLSLSSNGNYNYHRVSSTATLSLFGRSSPTDGTRSQSRMLRWAMPGA
AGAGLGRGFSFAFRRAKMDDEEEADEYDEYEDEEEEEEYDEQGLDRNIAK
RLKRSATIFRQVSWLSWWAQTILSTVALTILLFSNAVTNRSARGNILGNG
VALALGSLACSAASVCWTWGYTLKAKGWRQLGTLAELDDAQVRMRNSLKM
GLYINVAGMLLALVGAEQIVGTLVAKVLYAQGFQPSVMVGATGAAEVAQS
QFRALDVFIVQANTNTLLSHFCSLAASLWLLERTPKLAKLAKGKY*
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mRNA from alignment at D-dudresnayi_contig1057:25277..30634+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig1057.642.1 ID=mRNA_D-dudresnayi_contig1057.642.1|Name=mRNA_D-dudresnayi_contig1057.642.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=5358bp|location=Sequence derived from alignment at D-dudresnayi_contig1057:25277..30634+ (Desmarestia dudresnayi DdudBR16 monoicous)
AGCAGGGTTCACGTCCAAAAACAAACGAGGTCCCGATCGTTTCGACAACG
CGTGCCACGTGCCAGTGGATAGTATCGCACGCTAATCTAGACGAAAACTC
TGCGGTTGCATCGGTGTCTACGGCTCTCTCTCTTCATATATATATATCGC
TTCGGCAAGCTTGTCCCGGCCGAGAGAAGCACAACAAGGAAACCGGTAGT
ACTTGCAGCACAAAAGCAAAACATGAGAACAGTTCAAATGGGCGCGTGTG
CTGCGCTCTGTGCTGCAGCTAGCTTCCACGAAGGGTGTGTCGTAGCAGCC
TTTGCCACTTCGACATCCGCAAGATACGCCATCCGCCCTTCTTCCTTGCT
TTGCCCTGGAGCGAAAAACAACGTCCAGGCGGTTCTATCGCTGTCCAGTA
ATGGCAACTACAACTACCACCGTGTTTCCTCGACAGCAACTCTATCGCTT
TTTGGGAGGAGTAGCCCAACGGATGGGACCAGGTCGCAATCGCGAATGCT
TCGATGGGCGATGCCCGGGGCCGCAGGGGCAGGGTTGGGGAGAGGTTTTT
CGTTTGCGTTTCGAAGGGCAAAGATGGACGACGAGGAAGAAGCCGATGAG
TATGACGAGTACGAGGACGAAGAGGAGGAGGAAGAGTATGACGAACAAGG
CTTGGACAGGTGGGTTTTTCATGTTTTCGTTCACCTTCCTTGCTGTTTGC
CGATCTCACGCGTTGATGTTCTGTGTTGCTTGATTTGTACCACAGGTATC
ATATAGAACAACAGTACAGTACGAGTAGTAGTAGTCGAGAGGAGACTGGC
CTCAAGGTCAATCAGTCGCACTCATATACCACACAGCAGTCGGCTACTGC
AACATGTCATCTTCGTGAGCGTCAGTGCGTCAACAACGACAAACGTTTTT
CAAGTTTTGTGTTGAACAAAATTGTTGTTGGCTGCGCGTACACGAATTGC
TTTGCGCGACGACCTTCCGCATCATACAGCTGGCACTCTTGATATTATTG
GAAGGCGAGCTGTTTGATCTTGTACCAGCGCGATCTTTGAGTGCCCAAAA
GCCGGGTGAACGGACCGTAGTCGTGGTCGTGGTGGGGTGTAACTGGTACC
AATGCACAGCAAAGTGCGGAGTTATGCAGCAAACGATGTGCTATGATACG
AGTCCCTGCTCACGTCTTGTGAAGCAACAGATGATAAACCAGTTGTACTT
CTAATGTATGATACTCGTATCATATGTATGTGCAAATGTACGAGTAGCTT
TAGACTTTTGACTGTAAATGTACCATGGATAGCGATGGGGCTCCTGTAGA
GCTCTATATGGAGCTATCTATATACGAAGTACATATACGAGGCTCTACGA
TTAATAAGTATCGCAGCAGTATCACAACACCGTAGTGAAGTGGACGATTA
TCCACTGGATCCCGAACCAGTTCGGAACGTCACGGCTGACGTATCTTGAA
GTAAGCTAAAAAGCTAGTGTCTATTCTAATAGACTAGACTACGAGTAGTG
CTCTTGAGCTCAACCTCTAGTCTACACGAGTAGCTCGATCGATGACAGAC
TATATAATGCCTATTTGAGCACAGATAACCTTTCTGTAAGTATGATAATA
TAGCATGACATAGCGCTTACCACTCTGATCGAAATCATGAAGCAATAAGC
CCCGCCTGAAACTCTAAATTATATTCTAATTTGTATGCCCGGAATTTCAA
ACGGGGCTTATAATATCGTAATTTCGACCAGAGGGGTATATGTTTTCCAA
CCCGGCCCCTCGGGTCCGGTTTTATTTTCCTATTCTAGGAGAGGCGAGGC
CCCACACCGTTACAGCCCTGAGTTTGACAGAACTATCCAACGCGTTACGA
ATCCCATCAATAGTTTCGGCGATAGTAAGACCCCGTCCGCTGCAACTTGC
GGCAAGAAGGTGCATCAAGTGGGCGGAAGCTGAACCCACTCCTAACACGC
TCCAACGACGAGTTTGATGTTGTTTTATTAGTTTTAATGAGAAATCTATG
CATCAGCTATGACGCAGTGACGTTCCAAACTGGTTCTAAATTACGAAGAG
AGACGGAGCTTGAGAAAGAATAGGGCGAAGATAACATTTTTTTTTTCTTT
TTTTTTCCGTCCCATTTATTCTCTTCGCTCTATTCTTTCTCTAGCTTCAT
CTCTCTTCGTAACTCAGATCCAGGGTCACATAGTAGGCGCTCCTCCCGCC
TTCCCACTACGGTACGTGCCTACATTTTTATCGCGAGAAGAGTGCAGCAC
TTTTTTCCCTCGTCGACTTTCATCGAATTGTGCTTACTCACTCTCTCGCG
TTTTCCGCGACGGAAGATGGCACAGAAAAGTGCCGCCGGGAATCGAACCT
CCTGCTTCCGCCAACAGCGGCAACATCCTAACCATTAGACCATTGCGCCA
CCTGTTACATGGATGGGTAAAAAACAATCAAAAAGTGAGTAATGTTACTC
CGCTGCTGGTGATTTGTGTTCGTTGCGACACCGGTGGAAGAATTTTCTTG
CGACACGTCCGCCAATCCCCTTCCGTATACGCTATTTTATTCCCCATGCT
CCGCGCTTACACGTCCAACTCCCCGCCCGTGCGGAAATTAGGAATATCGC
CAAGCGGCTCAAGCGAAGCGCAACGATATTTCGACAGGTGAGGCCGTGAG
GTTGACAGTGAACATCAAGTATGTTACCGCGAGCGAGGGGGGGGTGGGGT
CGTGTTCGACGCGCGTCCGCCTGGTGGAGCGGCAGCGTCTGATTGAGAGG
TCGAAATCGTGGCCTGGAAAACACTAACGCACCCTGGTGGCGTGTTCCGT
ACAGCGGAGAAGAGCCGATGGATTATATAATGCAACGCGATGTCCTCTGA
CGACGAAGATTGCCCACCAATAATGTGCAATTATGTCCTCCATGGTACAG
TAGTAGTGTACTAGTTTTATGTTTTTTCCCAGTCCGACTTTCTACGGTCT
CTCTTCTTCTCCTCTACCGCACGCGTCGTGATTGTGATTGTGTGAATGAT
GCGCGTGCGCGACAGGTGAGCTGGCTGTCTTGGTGGGCCCAGACCATCCT
TTCTACGGTGGCGCTCACTATCTTGCTGTTCTCCAACGCCGTGACCAATC
GCTCTGCTCGCGGGAACATTCTGGGGAACGGCGTCGCGCTAGCGTTGGGG
AGCCTGGCCTGCTCTGCGGCGAGCGTTTGCTGGTGGGTCTTTATTTTTTT
GCGGCGAACGACGGTTACGCGCGGCGATGTCTTTTGGCTGACGTCGTGGG
TTTGTTTGACGGTGATTAGAAGTCAACTTGGGTGTAGATGTAGTTTATGA
TAGAGCGGATGTATCCGTCGCTGTCGCGTTGAACAAGAATTTAAAACAAA
ACAAAACAATTGTATGTTTGTGTTTGTTTGATTGCAGCGGATACATCGGA
GCGGAATTGACCGCATTTTGTGTTGTACCTGTACTGTTGTACAACGTACA
CAAATACAGAATACGTACGTGTGTACATATATTAGGTGGTTTATCTCTCC
TCTGTGTCTTTGTCGCACGTGTGTGTTTGTTCCGAAACGTTTGTTGCTGA
CGGGACTTTCTTAAGCCTCTAGTCTCTACCAGTACGAACGCATTGTTTGA
AACGTCTGGTTCACAGTAGTGATTCCCTTTGTGACAGCTGCAGTTTTTTG
GAGGATCGTCTCTGTCGCCGAGAAACAAAACAAACGGAATGCGCGTACGT
TGCTCGCTGCACTCTCTTGCGGATTCCGCGAGATTATTCGGTATACCCTT
TTTTTTTGTCATGCGGGTCAGATGCCGTTCAAAGCTTCTAAGTACAGCAT
TGGCGGTTGCTGTACCTTGTTCCGCCCCCGCGTAGTTGGCCTCCATTGAG
TACAGCTTCCGAAGCACCGTCGAAGCTCGCCCGGGCCAAAAACGAACTGG
CACCATGCCAACCTTAGCCTTGGCAATAATTACCAGATGCTATTCTAAGA
GTTTTTGTTGTCTCCAAGCAAAACGAAAAACAGTCATGGCGCGCCCAATT
CCACCAACATGTTTGTCTTCTTTTTTTTGGGTGGGGAAGGGGGGGGTATT
TATGTTTGGCTTGGAAAACTCTCCTTTGTTGGATCCCTTGCGGGTCCAAA
TACTTGGGTTTTCGATTGCTTGTTTTTATCAGCGCTATGTCAATGTGAAC
GTCACAAAACAGAATGGGACAATATGGACCGTTTTTAATCCTTGCAAGCG
GCAAAATCTTGCCTCAGTGTCCGAGCCGGCGATGTGGTCTAATTCTGTAT
TCTGTACGTAGTACTCTATCCCCCAATATTTTTTTGGTATCCAAGCTTCG
ATTTTGTTTTATAAGCCTTTGTATGATTTTATGCAAGTTTTTGTGTTGCC
TCCGGTGACCCCGGTGACCACAGGCTCTGCAGTGACATCACGGTGCCAGT
ATATATCGCTCGGTTAGTTGACGAATGTGGACTGGAACCTCCCGGTTTGT
CCGTTCAGAGTTGCGGTGTGCGAGACAGACAACAACTACTATAATACTAC
TGTTGTACCGTTGGCACTTACCAAAAATAATAATAATAATATATTAATAA
TAACCGAGGCAACTCGACGCACACTCTGCCATCTTTTATCCCTCGCCGCG
TGGCAACACGACTCAAAACAGCTGGAAGCGATGATATTTGATATTTTCTT
GTCTCGTTGCTTTCCTCCCACCCCGCCCGACAAAACAAGGACGTGGGGGT
ACACGTTGAAGGCGAAGGGCTGGAGGCAGCTGGGGACTCTGGCCGAGCTG
GACGATGCACAGGTTCGTATGCGGAACTCTCTGAAGATGGGTCTCTACAT
CAACGTGGCCGGCATGCTGCTGGCCCTCGTTGGGGCGGAGCAGATCGTGG
GGACTCTTGTCGCCAAGGTGTTGTATGCTCAAGGTGAGCTGCCTTGACCA
AAAACTACGATAGTCGCGCTGGCGAGAGAGAAAGATAGAGCACAAGGCAA
TTATTTATTTTTTATTTTTTATTATGTCTGTTTTGCGTCGTGGGACTGAT
TAGTGTATATCCGCTGAATTCCTAGCCCCCGCCCTTACAATGGCCTTGTC
TGCCTGCATGCTTTTCCGTTGGTAATTGTTGATGTTGCAGGCTTCCAGCC
GTCGGTTATGGTGGGGGCAACTGGGGCCGCGGAGGTCGCCCAGTCACAGT
TCCGCGCTCTGGACGTATTCATCGTACAGGCCAACACCAACACCTTGCTC
AGCCACTTCTGCTCGCTCGCGGCCTCGCTGTGGCTACTTGAGAGAACGCC
CAAGCTCGCAAAACTGGCCAAGGGGAAATATTGACTTGAAAAAAAAAAAC
GGAGTACGTAGGGGTGTTCGATGATTTTGCATGCCCCTACTGTACGATTG
GCACTGGG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig1057:25277..30634+

>mRNA_D-dudresnayi_contig1057.642.1 ID=mRNA_D-dudresnayi_contig1057.642.1|Name=mRNA_D-dudresnayi_contig1057.642.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2076bp|location=Sequence derived from alignment at D-dudresnayi_contig1057:25277..30634+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGAGAACAGTTCAAATGGGCGCGTGTGCTGCGCTCTGTGCTGCAGCTAG
CTTCCACGAAGGGTGTGTCGTAGCAGCCTTTGCCACTTCGACATCCGCAA
GATACGCCATCCGCCCTTCTTCCTTGCTTTGCCCTGGAGCGAAAAACAAC
GTCCAGGCGGTTCTATCGCTGTCCAGTAATGGCAACTACAACTACCACCG
TGTTTCCTCGACAGCAACTCTATCGCTTTTTGGGAGGAGTAGCCCAACGG
ATGGGACCAGGTCGCAATCGCGAATGCTTCGATGGGCGATGCCCGGGGCC
GCAGGGGCAGGGTTGGGGAGAGGTTTTTCGTTTGCGTTTCGAAGGGCAAA
GATGGACGACGAGGAAGAAGCCGATGAGTATGACGAGTACGAGGACGAAG
AGGAGGAGGAAGAGTATGACGAACAAGGCTTGGACAGATGAGAACAGTTC
AAATGGGCGCGTGTGCTGCGCTCTGTGCTGCAGCTAGCTTCCACGAAGGG
TGTGTCGTAGCAGCCTTTGCCACTTCGACATCCGCAAGATACGCCATCCG
CCCTTCTTCCTTGCTTTGCCCTGGAGCGAAAAACAACGTCCAGGCGGTTC
TATCGCTGTCCAGTAATGGCAACTACAACTACCACCGTGTTTCCTCGACA
GCAACTCTATCGCTTTTTGGGAGGAGTAGCCCAACGGATGGGACCAGGTC
GCAATCGCGAATGCTTCGATGGGCGATGCCCGGGGCCGCAGGGGCAGGGT
TGGGGAGAGGTTTTTCGTTTGCGTTTCGAAGGGCAAAGATGGACGACGAG
GAAGAAGCCGATGAGTATGACGAGTACGAGGACGAAGAGGAGGAGGAAGA
GTATGACGAACAAGGCTTGGACAGGAATATCGCCAAGCGGCTCAAGCGAA
GCGCAACGATATTTCGACAGGAATATCGCCAAGCGGCTCAAGCGAAGCGC
AACGATATTTCGACAGGTGAGCTGGCTGTCTTGGTGGGCCCAGACCATCC
TTTCTACGGTGGCGCTCACTATCTTGCTGTTCTCCAACGCCGTGACCAAT
CGCTCTGCTCGCGGGAACATTCTGGGGAACGGCGTCGCGCTAGCGTTGGG
GAGCCTGGCCTGCTCTGCGGCGAGCGTTTGCTGGTGAGCTGGCTGTCTTG
GTGGGCCCAGACCATCCTTTCTACGGTGGCGCTCACTATCTTGCTGTTCT
CCAACGCCGTGACCAATCGCTCTGCTCGCGGGAACATTCTGGGGAACGGC
GTCGCGCTAGCGTTGGGGAGCCTGGCCTGCTCTGCGGCGAGCGTTTGCTG
GACGTGGGGGTACACGTTGAAGGCGAAGGGCTGGAGGCAGCTGGGGACTC
TGGCCGAGCTGGACGATGCACAGGTTCGTATGCGGAACTCTCTGAAGATG
GGTCTCTACATCAACGTGGCCGGCATGCTGCTGGCCCTCGTTGGGGCGGA
GCAGATCGTGGGGACTCTTGTCGCCAAGGTGTTGTATGCTCAAGGACGTG
GGGGTACACGTTGAAGGCGAAGGGCTGGAGGCAGCTGGGGACTCTGGCCG
AGCTGGACGATGCACAGGTTCGTATGCGGAACTCTCTGAAGATGGGTCTC
TACATCAACGTGGCCGGCATGCTGCTGGCCCTCGTTGGGGCGGAGCAGAT
CGTGGGGACTCTTGTCGCCAAGGTGTTGTATGCTCAAGGCTTCCAGCCGT
CGGTTATGGTGGGGGCAACTGGGGCCGCGGAGGTCGCCCAGTCACAGTTC
CGCGCTCTGGACGTATTCATCGTACAGGCCAACACCAACACCTTGCTCAG
CCACTTCTGCTCGCTCGCGGCCTCGCTGTGGCTACTTGAGAGAACGCCCA
AGCTCGCAAAACTGGCCAAGGGGAAATATTGAGCTTCCAGCCGTCGGTTA
TGGTGGGGGCAACTGGGGCCGCGGAGGTCGCCCAGTCACAGTTCCGCGCT
CTGGACGTATTCATCGTACAGGCCAACACCAACACCTTGCTCAGCCACTT
CTGCTCGCTCGCGGCCTCGCTGTGGCTACTTGAGAGAACGCCCAAGCTCG
CAAAACTGGCCAAGGGGAAATATTGA
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