mRNA_D-dudresnayi_contig10546.599.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10546.599.1
Unique NamemRNA_D-dudresnayi_contig10546.599.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10546.599.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10546contigD-dudresnayi_contig10546:3772..5460 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size686
Cds size684
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927558.0092905-CDS-D-dudresnayi_contig10546:3771..41761622927558.0092905-CDS-D-dudresnayi_contig10546:3771..4176Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10546 3772..4176 +
1690556806.5185893-CDS-D-dudresnayi_contig10546:3771..41761690556806.5185893-CDS-D-dudresnayi_contig10546:3771..4176Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10546 3772..4176 +
1622927558.0235856-CDS-D-dudresnayi_contig10546:5181..54601622927558.0235856-CDS-D-dudresnayi_contig10546:5181..5460Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10546 5182..5460 +
1690556806.5376074-CDS-D-dudresnayi_contig10546:5181..54601690556806.5376074-CDS-D-dudresnayi_contig10546:5181..5460Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10546 5182..5460 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10546.599.1prot_D-dudresnayi_contig10546.599.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10546 3772..5460 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10546.599.1

>prot_D-dudresnayi_contig10546.599.1 ID=prot_D-dudresnayi_contig10546.599.1|Name=mRNA_D-dudresnayi_contig10546.599.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=228bp
STDGELDYYCRGEGGRGGEGGAEGNPATTVGEEGSSPRLFTRIKALAERS
DGGAENQATRCVFRAELKEWCSKLASRERETVVGLNYGLQKWDLRKVDAA
LAELVLLELTDLAEKYEDQKKDISSKVYWLKEELKEMRDGVARGGAAQGG
CISRLRESCVKAEMFTGVEWPEYAAAQESLQGARMAELEVQARRIKSANG
LSVNPRFNLSLEAGRGPALLLEDSVEGH
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mRNA from alignment at D-dudresnayi_contig10546:3772..5460+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10546.599.1 ID=mRNA_D-dudresnayi_contig10546.599.1|Name=mRNA_D-dudresnayi_contig10546.599.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1689bp|location=Sequence derived from alignment at D-dudresnayi_contig10546:3772..5460+ (Desmarestia dudresnayi DdudBR16 monoicous)
AGTACCGACGGGGAGCTTGACTATTACTGTCGCGGTGAAGGAGGTAGAGG
AGGAGAAGGTGGTGCTGAGGGTAACCCGGCCACTACTGTAGGCGAGGAAG
GGTCGTCGCCGAGGCTGTTCACGAGGATCAAAGCGCTCGCAGAAAGATCA
GACGGCGGTGCCGAGAACCAGGCGACGCGGTGCGTGTTTCGGGCGGAGCT
GAAGGAGTGGTGCTCAAAGCTGGCGTCGAGGGAGCGGGAGACGGTCGTTG
GGCTCAATTACGGGCTTCAGAAGTGGGACTTGCGGAAGGTGGATGCGGCG
CTGGCCGAGCTGGTTTTGCTGGAGCTCACGGACCTGGCCGAGAAGTATGA
AGACCAGAAGAAAGACATAAGCAGCAAGGTGTATTGGTTGAAGGAGGAGC
TTAAGGTGAGCCGAGAGACGGGGGGCTTCTTTTTCGGATATATGTCGTGC
GTGGGGGCAGATGTTAAACGGAGTTGGACGTTGAGCACACGCGTTTCGTG
TCCTACCCTGTCATAGTTAAGGACCGGAGGTGCCAGTAGACCTTACTCTC
GCGTCGCCTTGTGCAGTACGGTGCCCACGTGCGCACCGTACCATACATAC
CCTTTGCTGGTATCATAGTAATTCTTGAGTTGTGGATGTCACCGTATGCT
GTTGATATTTTGCGAAGTTTTCTCGACCGGTCGTGGATTTCTTTCTTTCT
CCATGGAATGCCCTGCGTCGTAGTGTTGGTTGGGTTCTTAAACAACAGTA
CGGTAGTACCAGCCATTATTTTATGGTCGAATATGCTAAGGTGCTTTGCT
GGTTCGCGCGGTGCTTCGTGCATGCGGTACAGAGAAAAAGGCTCGGACAA
GTGAGGTCTCGCATCGGGAAGCAGGGCGCGAGTTCTTATGGTTGTCCGTT
ATTTTCTTGTGGCATTCTCTTCTGACAGAAACTACCGTCTCCCAGGCCAG
GCACCAGTATATCGTAACAATCGCCTCACCCCTTCTCTCCCTCCATCCCG
AGTACTCACCTGAAGCCTGAGCGTGTGCGTGCACGACATACCCCCCTAAG
CGCAACAGCTGTTGTAAGGGCGGGCGGGGGTGGGCAGGCAGTTTCGCGCC
GACAACATTTTCCTCCGTAGCCGCCGTGCTCGTGTACTATTTTTGGCGCT
CCCCAAGCGTGGCGGTTTTTCGGGGGATTGTCTTGCCGTAGTCCGCCCCC
CCCCCCCCACCCCCTCCCCCGCTCCTGCTTCAGCCCCCCCCCCACCGCCA
CCTCCCGAAATCCCTCCCATCTTGCGACCAAAACAGTGCCGGGTCATCCG
GCAAGCAAAAAAATATTGATGTTTTTCCTCCCACGTCCTCCACAAACCCC
ATCATACGCGATCCGATTGTGACGCGATTTTCTTGTTTTTTCTGTTGAAT
CGTGGCGCAGGAAATGCGAGACGGCGTGGCCAGGGGGGGCGCGGCACAGG
GGGGCTGCATCTCACGATTAAGGGAGTCTTGCGTCAAGGCCGAGATGTTC
ACCGGCGTGGAGTGGCCCGAGTACGCGGCCGCTCAAGAGTCCCTGCAGGG
CGCCCGCATGGCGGAGCTAGAGGTGCAGGCCCGCCGAATAAAGTCGGCGA
ACGGCCTAAGCGTCAACCCTCGCTTCAATCTGTCCCTTGAAGCCGGCCGC
GGCCCGGCGCTGCTCTTGGAGGACTCGGTCGAAGGCCAC
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10546:3772..5460+

>mRNA_D-dudresnayi_contig10546.599.1 ID=mRNA_D-dudresnayi_contig10546.599.1|Name=mRNA_D-dudresnayi_contig10546.599.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1368bp|location=Sequence derived from alignment at D-dudresnayi_contig10546:3772..5460+ (Desmarestia dudresnayi DdudBR16 monoicous)
AGTACCGACGGGGAGCTTGACTATTACTGTCGCGGTGAAGGAGGTAGAGG
AGGAGAAGGTGGTGCTGAGGGTAACCCGGCCACTACTGTAGGCGAGGAAG
GGTCGTCGCCGAGGCTGTTCACGAGGATCAAAGCGCTCGCAGAAAGATCA
GACGGCGGTGCCGAGAACCAGGCGACGCGGTGCGTGTTTCGGGCGGAGCT
GAAGGAGTGGTGCTCAAAGCTGGCGTCGAGGGAGCGGGAGACGGTCGTTG
GGCTCAATTACGGGCTTCAGAAGTGGGACTTGCGGAAGGTGGATGCGGCG
CTGGCCGAGCTGGTTTTGCTGGAGCTCACGGACCTGGCCGAGAAGTATGA
AGACCAGAAGAAAGACATAAGCAGCAAGGTGTATTGGTTGAAGGAGGAGC
TTAAGAGTACCGACGGGGAGCTTGACTATTACTGTCGCGGTGAAGGAGGT
AGAGGAGGAGAAGGTGGTGCTGAGGGTAACCCGGCCACTACTGTAGGCGA
GGAAGGGTCGTCGCCGAGGCTGTTCACGAGGATCAAAGCGCTCGCAGAAA
GATCAGACGGCGGTGCCGAGAACCAGGCGACGCGGTGCGTGTTTCGGGCG
GAGCTGAAGGAGTGGTGCTCAAAGCTGGCGTCGAGGGAGCGGGAGACGGT
CGTTGGGCTCAATTACGGGCTTCAGAAGTGGGACTTGCGGAAGGTGGATG
CGGCGCTGGCCGAGCTGGTTTTGCTGGAGCTCACGGACCTGGCCGAGAAG
TATGAAGACCAGAAGAAAGACATAAGCAGCAAGGTGTATTGGTTGAAGGA
GGAGCTTAAGGAAATGCGAGACGGCGTGGCCAGGGGGGGCGCGGCACAGG
GGGGCTGCATCTCACGATTAAGGGAGTCTTGCGTCAAGGCCGAGATGTTC
ACCGGCGTGGAGTGGCCCGAGTACGCGGCCGCTCAAGAGTCCCTGCAGGG
CGCCCGCATGGCGGAGCTAGAGGTGCAGGCCCGCCGAATAAAGTCGGCGA
ACGGCCTAAGCGTCAACCCTCGCTTCAATCTGTCCCTTGAAGCCGGCCGC
GGCCCGGCGCTGCTCTTGGAGGACTCGGTCGAAGGCCACGAAATGCGAGA
CGGCGTGGCCAGGGGGGGCGCGGCACAGGGGGGCTGCATCTCACGATTAA
GGGAGTCTTGCGTCAAGGCCGAGATGTTCACCGGCGTGGAGTGGCCCGAG
TACGCGGCCGCTCAAGAGTCCCTGCAGGGCGCCCGCATGGCGGAGCTAGA
GGTGCAGGCCCGCCGAATAAAGTCGGCGAACGGCCTAAGCGTCAACCCTC
GCTTCAATCTGTCCCTTGAAGCCGGCCGCGGCCCGGCGCTGCTCTTGGAG
GACTCGGTCGAAGGCCAC
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