mRNA_D-dudresnayi_contig10515.563.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10515.563.1
Unique NamemRNA_D-dudresnayi_contig10515.563.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig10515.563.1 vs. uniprot
Match: A0A6H5KRG7_9PHAE (GP-PDE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRG7_9PHAE)

HSP 1 Score: 638 bits (1646), Expect = 1.430e-222
Identity = 335/473 (70.82%), Postives = 379/473 (80.13%), Query Frame = 3 
Query:    3 HVEGNTMASFLEAVKLGVDTIEFDVLTTQDGVVICHHDPLIEETGAWIENLTLSETRKSLNHHVLTFEEMLQEKGLSESNVHLYVDMKHTEIVRPVLHAVRQAVDRWGWTADRIVVATFRQLDLLQVNAFRQAIPELSRLRTACIMDGGPLTLARDFKALEVNILSTGKDHVSPDLVADCQRRGIQVWVWTVNSVHFMERLLKMGVDGLCSDYPERVHEANKKFRPQATQTDAATFPFPQGPDSSADVDLRGLVASDSESITDSGTEEWQAFEMGLEIGNSGSGKAAA---------------------------AEGATDSTALGGWFSRCDTCEKSAENSEQQRLMAALYGDLAGVRDFAVGAVEESKMLAKAASKAVAVKAFLDGDAMKGTPASSELKAVLALCKEAESEAELALRPFVSSAETFRWSVDLISTGKGREFMAKLQSSMEQDEPQPMLPFETAFVYDLLGM 1340
            HVEGNTM SFLEAV+LGVD IEFDVLTT DGVVICHHDPLIEE+G WIENLTL++TR+ L H+V TFEEMLQEK LSES VHLY+DMKHTEIVRPVLHAV QAVDRWGWTADR+VVATFRQLDLLQVNA+RQAIPEL+ LRTACIMDGGPLTLARDFKAL+V+ILSTGKDHVSPDLVADCQRRGIQVWVWTVNS+HFMERLLKMGVDGLC+DYP  VHE+N++ RPQA+QTDAATFPFPQGP + + VDLRGL A  S      G+    +       GN+ S  A+                            AE +TD+T LGGW+SRCDTCE+SAE S+QQRL+AALYGDLAGVRDFAV  VE++K+L K  S+AVAV++FL GDAMKG  A+ EL A  AL KEAE+ AE  LRPFVSSAETF+WSVDLIST +GREFM++L  SM++DE  PMLPFE AFV DLLGM
Sbjct:  128 HVEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEESGEWIENLTLAQTRERLKHNVSTFEEMLQEKVLSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAYRQAIPELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPGLVHESNRRLRPQASQTDAATFPFPQGPGAYSGVDLRGLAAPASSEGKAVGSTALDSD------GNNSSSTASMSGSXXXXXXXXXXXXXXXXXXXXTTNKAEDSTDATVLGGWYSRCDTCEESAEGSDQQRLIAALYGDLAGVRDFAVRTVEDAKVLVKVCSRAVAVESFLAGDAMKGKRATRELAAATALSKEAETLAEQTLRPFVSSAETFKWSVDLISTAQGREFMSQLTRSMKRDEVLPMLPFEKAFVKDLLGM 594
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BLAST of mRNA_D-dudresnayi_contig10515.563.1 vs. uniprot
Match: A0A835YQF6_9STRA (PLC-like phosphodiesterase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF6_9STRA)

HSP 1 Score: 250 bits (638), Expect = 1.980e-74
Identity = 122/241 (50.62%), Postives = 164/241 (68.05%), Query Frame = 3 
Query:    3 HVEGNTMASFLEAVKLGVDTIEFDVLTTQDGVVICHHDPLIEETGAWIENLTLSETRKSLNHHVLTFEEMLQEKGLSESNVHLYVDMKHTEIVRPVLHAVRQAVDRWGWTADRIVVATFRQLDLLQVNAFRQAIPELSRLRTACIMDGGPLTLARDFKALEVNILSTGKDHVSPDLVADCQRRGIQVWVWTVNSVHFMERLLKMGVDGLCSDYPERVHEANKKFRPQATQTDAATFPFPQG 725
            HV+GNT+ SF  AV+LGVD IEFDV+   DG+ +CHHDPL E +G W +++T+++ R  L     T +EML ++ L +S VHLY D+KHT IVRP + ++  AV R GW A R VVATF+Q++LL++NAFRQAIPEL  LRTA I+D  PL+LARDF+AL    +S G+  V P+ VADC RRG+++W WTVN    ++ L ++G+DG+C+DYPE VH A              T P P G
Sbjct:  110 HVKGNTLDSFHRAVELGVDMIEFDVVACADGI-LCHHDPLHEASGKWYQDMTIAKVRSLLGRPHPTLDEMLADRRLRDSGVHLYFDLKHTNIVRPTMRSIVAAVTRGGWHASRFVVATFKQVELLEINAFRQAIPELRGLRTAAILDAIPLSLARDFEALGCCAVSVGQYCVCPEFVADCHRRGLEMWAWTVNHKSMVDELFRLGIDGICTDYPELVHAAAAXXXXXXXXXXXXTPPHPAG 349
[Close]
BLAST of mRNA_D-dudresnayi_contig10515.563.1 vs. uniprot
Match: A0A4D9D615_9STRA (GP-PDE domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D615_9STRA)

HSP 1 Score: 159 bits (403), Expect = 3.460e-38
Identity = 89/217 (41.01%), Postives = 133/217 (61.29%), Query Frame = 3 
Query:    3 HVEGNTMASFLEAVKLGVDTIEFDVLTTQDGVVICHHDPLIEETGAWIENLTLSETRKSLNHHVLTFEEMLQEKGLSESNVHLYVDMKHTEIVRPVLHAVRQAVDRWGWTADRIVVATFRQLDLLQVNAFRQAIPE-LSRLRTACIMDGGPLTLARDFKALEVNILSTGKDHVSPDLVADCQRRGIQVWVWTVNSVHFMERLLKMGVDGLCSDYPER 650
            HV+GN++ASF  AV LG D IE DV   + G VI HHD  + + G  +ENL L++ ++ ++  V     +L +  L  S V LY+D+K   +V P++  + +A+ + GW   R++VA+F Q D+++VNA R A P  L+ L+T  I+DG P++ A+++ AL V+  S G   V P  + D  RRGI V VWTVN+   M R   +GVD L +D+PER
Sbjct:  161 HVKGNSLASFQRAVALGADMIELDVCLDRSGEVIVHHDRYLPD-GRLLENLALAQIKR-VDPAVEPLSRVLAD--LRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVNNASAMRRYADLGVDALVTDFPER 373
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BLAST of mRNA_D-dudresnayi_contig10515.563.1 vs. uniprot
Match: W7T4I9_9STRA (Glycerophosphoryl diester phosphodiesterase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4I9_9STRA)

HSP 1 Score: 115 bits (288), Expect = 6.390e-26
Identity = 67/178 (37.64%), Postives = 106/178 (59.55%), Query Frame = 3 
Query:   63 IEFDVLTTQDGVVICHHDPLIEETGAWIENLTLSETRKSLNHHVLTFEEMLQEKGLSESNVHLYVDMKHTEIVRPVLHAVRQAVDRWGWTADRIVVATFRQLDLLQVNAFRQAIPE-LSRLRTACIMDGGPLTLARDFKALEVNILSTGKDHVSPDLVADCQRRGIQVWVWTVNSVHF 593
            IE DV   + G VI HHD  + + G  +ENL L++ ++ ++  V     +L +  L  S V LY+D+K   +V P++  + +A+ + GW   R++VA+F Q D+++VNA R A P  L+ L+T  I+DG P++ A+++ AL V+  S G   V P  + D  RRGI V VWTVN+  +
Sbjct:    2 IELDVCLDRSGEVIVHHDRYLPD-GRLLENLALAQIKR-VDPAVEPLARVLAD--LRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVNNARW 175
[Close]
BLAST of mRNA_D-dudresnayi_contig10515.563.1 vs. uniprot
Match: A0A0S8IH52_9BACT (GP-PDE domain-containing protein n=1 Tax=Omnitrophica WOR_2 bacterium SM23_72 TaxID=1703777 RepID=A0A0S8IH52_9BACT)

HSP 1 Score: 108 bits (271), Expect = 2.350e-23
Identity = 64/220 (29.09%), Postives = 117/220 (53.18%), Query Frame = 3 
Query:   15 NTMASFLEAVKLGVDTIEFDVLTTQDGVVICHHDPLIE----ETGAWIENLTLSETRK---SLNHHVLTFEEMLQEKGLSESNVHLYVDMKHTEIVRPVLHAVRQAVDRWGWTADRIVVATFRQLDLLQVNAFRQAIPELSRLRTACIMDGGPLTLARDFKALEVNILSTGKDHVSPDLVADCQRRGIQVWVWTVNSVHFMERLLKMGVDGLCSDYPERV 653
            NT+ SF +A++L VD IEFDV   + G V+  HD +++    +TG ++ N TL E +         +LT EE L      +  V + +++K   +   V   +++ V+  GW+ D  +V++F   +LL+ N         SR++   ++ G P+  A     +    L   K+ ++  L+ D  +RG++V+V+T N+   + ++  MGVDG+ SD+P+R+
Sbjct:   17 NTILSFKKALELNVDMIEFDVCICKTGEVVLFHDKMVDLVVDDTG-YVANKTLQELKAYDVGKGQRILTLEETLD---FIDKRVRVNIEIKGEGVAGAVFRIIKRCVEEKGWSWDDFLVSSFNHYELLEFNRLT------SRIKIGAVIAGIPIGYAECATRVNAYSLHPSKEFINQALIEDAHKRGLKVFVYTPNATEDIRQMKSMGVDGIFSDFPDRI 226
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BLAST of mRNA_D-dudresnayi_contig10515.563.1 vs. uniprot
Match: A0A2E0JIA8_9FLAO (Glycerophosphodiester phosphodiesterase n=2 Tax=Flavobacteriales TaxID=200644 RepID=A0A2E0JIA8_9FLAO)

HSP 1 Score: 103 bits (258), Expect = 2.340e-21
Identity = 65/225 (28.89%), Postives = 123/225 (54.67%), Query Frame = 3 
Query:    3 HVEGNTMASFLEAVKLGVDTIEFDVLTTQDGVVICHHDPLIEE---TGAWIENLTLSETRKSL---NHHVLTFEEMLQEKGLSESNVHLYVDMKHTEIVRPVLHAVRQAVDRWGWTADRIVVATFRQLDLLQVNAFRQAIPELSRLRTACIMDGGPLTLARDFKALEVNILSTGKDHVSPDLVADCQRRGIQVWVWTVNSVHFMERLLKMGVDGLCSDYPERVHE 659
            H+  NT+ S  +A++LGVD IE DV   + G ++  HD  +E    +  +IE+L L   +  +    + + T EE+LQ   L +  V L +++K      P  + + Q  ++ GWT D+ ++++F+  +L ++      IP ++ L  + I     L  A+  KA+ +N     KD ++   +   Q  G++V+ +T+N +  +ER++K+GVD + +DYPER+++
Sbjct:   34 HIAENTIPSINKAMELGVDGIEIDVFKCKSGELVVFHDERLERLTNSSGFIESLELDSIKNIIVLDKYRIPTLEEVLQ---LIDGQVKLNIELKGYGTASPTNYLINQYNNKGGWTEDKFIISSFKWDELEKIRELNMTIP-IAVLVNSNINPIDALPFAKKIKAIAINPYF--KD-LNQKNIEKIQSTGLKVFPYTINELDDIERMIKLGVDAIITDYPERINK 251
[Close]
BLAST of mRNA_D-dudresnayi_contig10515.563.1 vs. uniprot
Match: A0A3R6ZVH9_9BACT (Glycerophosphodiester phosphodiesterase n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=A0A3R6ZVH9_9BACT)

HSP 1 Score: 100 bits (250), Expect = 1.550e-20
Identity = 62/219 (28.31%), Postives = 113/219 (51.60%), Query Frame = 3 
Query:   15 NTMASFLEAVKLGVDTIEFDVLTTQDGVVICHHDPLIEETG---AWIENLTLSETRKSL---NHHVLTFEEMLQEKGLSESNVHLYVDMKHTEIVRPVLHAVRQAVDRWGWTADRIVVATFRQLDLLQVNAFRQAIPELSRLRTACIMDGGPLTLARDFKALEVNILSTGKDHVSPDLVADCQRRGIQVWVWTVNSVHFMERLLKMGVDGLCSDYPERV 653
            NT+ SF +A++LGVD IE DV   Q G ++  HD  ++ T     ++ + T +E R  L      + T  E+     L +  V + V++K      PV   + Q +    WTA+  +V++F   D  ++  F++ +PE+   R   ++ G P+  ++  + +    +    D      +AD  +RG +V+V+TVN    + ++ ++GVDGL S+YP+R+
Sbjct:   16 NTLRSFAKALELGVDMIELDVYVCQSGELVVIHDDKVDRTTNGHGYVVDKTFTEIRSLLIAQGEKIPTLSEVFD---LVDKKVPINVELKGEHTAEPVAQLIGQYIKEKDWTAEHFLVSSF---DHYELKRFKELMPEI---RVGALIAGIPIGYSKFAEEVSAYSVHLSLDFARQKYIADAHQRGFKVFVYTVNDKDDINKMKELGVDGLFSNYPDRI 225
[Close]
BLAST of mRNA_D-dudresnayi_contig10515.563.1 vs. uniprot
Match: A0A0G1U833_9BACT (Glycerophosphoryl diester phosphodiesterase n=3 Tax=Candidatus Wolfebacteria TaxID=1752735 RepID=A0A0G1U833_9BACT)

HSP 1 Score: 100 bits (249), Expect = 2.260e-20
Identity = 61/219 (27.85%), Postives = 107/219 (48.86%), Query Frame = 3 
Query:   15 NTMASFLEAVKLGVDTIEFDVLTTQDGVVICHHDPLIEETG---AWIENLTLSETRK---SLNHHVLTFEEMLQEKGLSESNVHLYVDMKHTEIVRPVLHAVRQAVDRWGWTADRIVVATFRQLDLLQVNAFRQAIPELSRLRTACIMDGGPLTLARDFKALEVNILSTGKDHVSPDLVADCQRRGIQVWVWTVNSVHFMERLLKMGVDGLCSDYPERV 653
            NT+A+F +A+ LGVD +E DV   + G ++  HD  ++ T      + +L L   R         V+T EE+L    + +  V   V++K  E++ P    + + +   GW  D+  V  F   D   +  F +  P   R+R   I+ G P+  A   + L    ++     ++ + V D   RG+QV+ W V+    +ER+  +GVDG+ S++P+R+
Sbjct:   19 NTLAAFQKAIDLGVDMVELDVHRCKTGEIVVMHDDTVDRTTNGYGRVADLALDALRMLDAGQGERVVTLEEVLD---MLDHRVGAVVELKEAEVIEPTAEIINRYISEKGWAVDQFSVTAF---DHYLLRTFHKLCP---RVRLGAILAGNPIGYAEFGQRLGAASVNMAHPFLTQEFVYDAHERGLQVFAWPVDEPRDIERMKSIGVDGIFSNFPDRI 228
[Close]
BLAST of mRNA_D-dudresnayi_contig10515.563.1 vs. uniprot
Match: A0A381XW96_9ZZZZ (GP-PDE domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381XW96_9ZZZZ)

HSP 1 Score: 99.8 bits (247), Expect = 3.250e-20
Identity = 56/220 (25.45%), Postives = 113/220 (51.36%), Query Frame = 3 
Query:    3 HVEGNTMASFLEAVKLGVDTIEFDVLTTQDGVVICHHDPLIEE---TGAWIENLTLSETRKSLNHHVLTFEEMLQEKGLSESNVHLYVDMKHTEIVRPVLHAVRQAVDRWGWTADRIVVATFRQLDLLQVNAFRQAIPELSRLRTACIMDGGPLTLARDFKALEVNILSTGKDHVSPDLVADCQRRGIQVWVWTVNSVHFMERLLKMGVDGLCSDYPERV 653
            HV  NT+ S  +A++LGVD IE DV   + G +I  HD  +     + A+IENL+     K          E+++   +  + + L +++K  E  + V   + + +++     DR ++++F   +L +  +F   IP       A + D  PL      K L    ++     ++ ++V   ++ G++++ +TVNS++ ++++  +GVDG+ ++YPER+
Sbjct:    3 HVTENTIPSIKKAIELGVDGIEIDVFKCKSGEIIVFHDKKLNRLTNSSAYIENLSFDSINKIKVMGEYRIPELIEVMNVLPNEIFLNIELKGEETAKKVNEIITEFINKTQSKLDRFIISSFNWSELEKFRSFNSKIP------IAILTDNNPLNAIPVAKKLNAFAINPSYKLLNKNVVNQIKKEGLKIFPYTVNSINDIDKMKNLGVDGIITNYPERI 216
[Close]
BLAST of mRNA_D-dudresnayi_contig10515.563.1 vs. uniprot
Match: A0A3A1NCX4_9FLAO (Glycerophosphodiester phosphodiesterase n=3 Tax=Muricauda TaxID=111500 RepID=A0A3A1NCX4_9FLAO)

HSP 1 Score: 96.3 bits (238), Expect = 7.140e-19
Identity = 59/224 (26.34%), Postives = 112/224 (50.00%), Query Frame = 3 
Query:    3 HVEGNTMASFLEAVKLGVDTIEFDVLTTQDGVVICHHDPLIEE---TGAWIENLTLSETRKSL---NHHVLTFEEMLQEKGLSESNVHLYVDMKHTEIVRPVLHAVRQAVDRWGWTADRIVVATFRQLDLLQVNAFRQAIPELSRLRTACIMDGGPLTLARDFKALEVNILSTGKDHVSPDLVADCQRRGIQVWVWTVNSVHFMERLLKMGVDGLCSDYPERVH 656
            H   NT+AS  +A+ LGVD IE DV   Q G ++  HD  ++    +G  IE   + + R+      H +   + +L+   L  +   L +++K  +    V H V   +++ GW+ D I++++F+  +L  +    + I      + A + +  PL      K L    ++     ++ +  A  Q  G++V+ WTVN    ++++++ GVDG+ ++YPERV+
Sbjct:   17 HETENTLASIQKALDLGVDMIEIDVFKIQSGEIVVFHDERVDRLANSGGNIEEYNIVQVRQLTLDGGHKIPLLQSVLK---LINNQTALNIELKGDDTADKVNHIVNYYIEKQGWSPDNILISSFKWDELRDMRNLNKDI------KIAVLTEEDPLEAIEVAKELNAVAINPNFRTLTKENTAKIQSEGLKVYTWTVNEPEDIQKMVEFGVDGIITNYPERVN 231
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10515.563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRG7_9PHAE1.430e-22270.82GP-PDE domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A835YQF6_9STRA1.980e-7450.62PLC-like phosphodiesterase (Fragment) n=1 Tax=Trib... [more]
A0A4D9D615_9STRA3.460e-3841.01GP-PDE domain-containing protein n=1 Tax=Nannochlo... [more]
W7T4I9_9STRA6.390e-2637.64Glycerophosphoryl diester phosphodiesterase n=1 Ta... [more]
A0A0S8IH52_9BACT2.350e-2329.09GP-PDE domain-containing protein n=1 Tax=Omnitroph... [more]
A0A2E0JIA8_9FLAO2.340e-2128.89Glycerophosphodiester phosphodiesterase n=2 Tax=Fl... [more]
A0A3R6ZVH9_9BACT1.550e-2028.31Glycerophosphodiester phosphodiesterase n=1 Tax=Ca... [more]
A0A0G1U833_9BACT2.260e-2027.85Glycerophosphoryl diester phosphodiesterase n=3 Ta... [more]
A0A381XW96_9ZZZZ3.250e-2025.45GP-PDE domain-containing protein n=1 Tax=marine me... [more]
A0A3A1NCX4_9FLAO7.140e-1926.34Glycerophosphodiester phosphodiesterase n=3 Tax=Mu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10515contigD-dudresnayi_contig10515:1094..6074 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score92.4
Seed ortholog evalue5.6e-16
Seed eggNOG ortholog1286632.P278_32270
Preferred nameugpQ
KEGG rclassRC00017,RC00425
KEGG koko:K01126
KEGG ReactionR01030,R01470
KEGG Pathwayko00564,map00564
EggNOG free text desc.glycerophosphoryl diester phosphodiesterase
EggNOG OGs1HYHS@117743,4NGNU@976,COG0584@1,COG0584@2
EC3.1.4.46
COG Functional cat.C
Best tax levelFlavobacteriia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionglcerophosphoryl diester phosphodiesterase
Ec32 orthologEc-23_002410.1
Exons5
Model size1739
Cds size1332
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927554.1766376-UTR-D-dudresnayi_contig10515:1093..11131622927554.1766376-UTR-D-dudresnayi_contig10515:1093..1113Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10515 1094..1113 +
1690556804.9773362-UTR-D-dudresnayi_contig10515:1093..11131690556804.9773362-UTR-D-dudresnayi_contig10515:1093..1113Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10515 1094..1113 +
1622927554.2701952-UTR-D-dudresnayi_contig10515:5687..60741622927554.2701952-UTR-D-dudresnayi_contig10515:5687..6074Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10515 5688..6074 +
1690556805.0482001-UTR-D-dudresnayi_contig10515:5687..60741690556805.0482001-UTR-D-dudresnayi_contig10515:5687..6074Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10515 5688..6074 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927554.2009635-CDS-D-dudresnayi_contig10515:1113..12281622927554.2009635-CDS-D-dudresnayi_contig10515:1113..1228Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10515 1114..1228 +
1690556804.9887764-CDS-D-dudresnayi_contig10515:1113..12281690556804.9887764-CDS-D-dudresnayi_contig10515:1113..1228Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10515 1114..1228 +
1622927554.2123353-CDS-D-dudresnayi_contig10515:2960..32051622927554.2123353-CDS-D-dudresnayi_contig10515:2960..3205Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10515 2961..3205 +
1690556804.9974747-CDS-D-dudresnayi_contig10515:2960..32051690556804.9974747-CDS-D-dudresnayi_contig10515:2960..3205Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10515 2961..3205 +
1622927554.2224498-CDS-D-dudresnayi_contig10515:4025..42531622927554.2224498-CDS-D-dudresnayi_contig10515:4025..4253Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10515 4026..4253 +
1690556805.015223-CDS-D-dudresnayi_contig10515:4025..42531690556805.015223-CDS-D-dudresnayi_contig10515:4025..4253Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10515 4026..4253 +
1622927554.2335486-CDS-D-dudresnayi_contig10515:4504..51341622927554.2335486-CDS-D-dudresnayi_contig10515:4504..5134Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10515 4505..5134 +
1690556805.0279527-CDS-D-dudresnayi_contig10515:4504..51341690556805.0279527-CDS-D-dudresnayi_contig10515:4504..5134Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10515 4505..5134 +
1622927554.2563229-CDS-D-dudresnayi_contig10515:5573..56871622927554.2563229-CDS-D-dudresnayi_contig10515:5573..5687Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10515 5574..5687 +
1690556805.0381796-CDS-D-dudresnayi_contig10515:5573..56871690556805.0381796-CDS-D-dudresnayi_contig10515:5573..5687Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10515 5574..5687 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10515.563.1prot_D-dudresnayi_contig10515.563.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10515 1114..5687 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10515.563.1

>prot_D-dudresnayi_contig10515.563.1 ID=prot_D-dudresnayi_contig10515.563.1|Name=mRNA_D-dudresnayi_contig10515.563.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=444bp
MASFLEAVKLGVDTIEFDVLTTQDGVVICHHDPLIEETGAWIENLTLSET
RKSLNHHVLTFEEMLQEKGLSESNVHLYVDMKHTEIVRPVLHAVRQAVDR
WGWTADRIVVATFRQLDLLQVNAFRQAIPELSRLRTACIMDGGPLTLARD
FKALEVNILSTGKDHVSPDLVADCQRRGIQVWVWTVNSVHFMERLLKMGV
DGLCSDYPERVHEANKKFRPQATQTDAATFPFPQGPDSSADVDLRGLVAS
DSESITDSGTEEWQAFEMGLEIGNSGSGKAAAAEGATDSTALGGWFSRCD
TCEKSAENSEQQRLMAALYGDLAGVRDFAVGAVEESKMLAKAASKAVAVK
AFLDGDAMKGTPASSELKAVLALCKEAESEAELALRPFVSSAETFRWSVD
LISTGKGREFMAKLQSSMEQDEPQPMLPFETAFVYDLLGMASN*
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mRNA from alignment at D-dudresnayi_contig10515:1094..6074+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10515.563.1 ID=mRNA_D-dudresnayi_contig10515.563.1|Name=mRNA_D-dudresnayi_contig10515.563.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=4981bp|location=Sequence derived from alignment at D-dudresnayi_contig10515:1094..6074+ (Desmarestia dudresnayi DdudBR16 monoicous)
GGCACGTGGAAGGAAACACGATGGCGTCTTTCCTCGAGGCCGTCAAGCTT
GGCGTGGACACGATCGAGTTCGACGTCCTGACCACCCAGGATGGTGTCGT
GATCTGTCACCACGACCCCCTTATCGAAGAAACTGGTGAGTCTGATCATA
CGGGCATAACGCATGATGAAAGCGTTACTACTGGCTGTCTGTTGTACCAA
ATTGCCCCGTGTTTGCCGGTTGCCGCTGTTGTGGTCGTGTGAGCAAATTA
GCGCCGCGGGTCGTTTTGAGTCGGTGTTTGTTTTGTCCTCGGGCTGATGA
GTATAGAAACAAAAATACAAAATAGCTGTACATATCATACCCGTCATGTA
TGACGACGTCGATGGAGGTATGATGACGTTGCACTTCTTTAGATCGATAC
GGTAGGATTTGATTTTATTATACTTAATATTGTAGACGTGGGGTACAACG
CATGCTAGAAATTTCCATAGCATAATATAGCCCGAAATGACCCTCCTAAA
GGAGCCACTAGGTAAATGGCTGACGGCTGACTGGTTCGCAGCGAAGAGCC
GCGAGACACGTGAACGACACGCGCGTCAACTGTTCGCCGTGTTGACGTCC
GCCCCCTTAAGACGCACTGAGCACCCGCCCCCTTGTGAAACGCGTACGGG
TTAATTTAATTGTCTTCGCTTTATTCGTGTTTGCTTGTTTTCTGTTTATT
GTTTTCTGTTTTCTTAGCCCTTGCTTTCCCCCCAGACGCGGACAAGATGG
AATCGGTGGGGGGGTGGATGGAAATCCGTAGTACCTGTCCAGTGTCTTAG
TTTTATTTGTGCTCTGTTTGTGTTTTGTTTTCGTTCGTTTTACTCTTTTT
ATTTGTATTTTTTGTGCCTTCCTGTTCTCTTAGCCAATGTCATCTCCCAA
GTCGTGGATGATATGAAATCAGTGGGGGCAGATTGAGTTTGTGGAGAGGG
GCCGGAGGGGACGGTTTTATTCGGTAAAACAAGGTGCCTACCTTTTTCAC
CACGGGTCCGCGCGATCGGGCTAATGTGACGGAAATCATAATAATACTCC
GTATAATAATAATGCTAACAGTGAAGGCCTGTCCTAACAAGATTTAAGAA
TTCAGAATTGTTGGAAAATTTTGAATTTATCTGCTGAAAATTACCGTTTG
GGTCTCAACAAATTTCTCGAGCTTGGGTCAACTGGGACGCTTGACACCCA
TTCCTTTGTGTTTGTGATCCCGTTGTGTCGTGTGCCTTGTACTGCGACCC
CGGGTGTGGCGCTACGGGCTTCGCAGCACCTTGTGTAGTAGCACTGTGCT
ATGTTGCAGCTCCTGGGCGAGTTCCAACAGTCGAGGCGTTTATTTGCTGA
ATTGTGAATGCTTAACAAAATAAGTGCTGCGCTACTTCTTTTCTTCAACT
TTCAGAATTCAGGAATTTATTTCTGTTAACAAACTACGCAGAAGGGCCGT
CCAATCACAGAGTTTCATATGGAGGCGTCTGCTGAAGTTTTGCAAAATTC
TGAATTCTAAATTTTTGATAGGACAGACCCTGAGTGCTAACCTTCCAAGA
CATGGCCGTCATGTGTAAAGAGTGCCATCATATTATTTTTTTTACTTACA
AATACATCAGCCGTGACGTTCCAAACTGGTTCGGGTGCCAAGGGATGATC
GTCAACCTCACTGTGTGATACTTCGGTCGCGCGGGTTATATCGGCCCTCA
GATAAGGTACAACGCAGTGACTCCCATTGTATGTATTGCGCATTTTTATT
ATTATTCATTACAAGTACATAACCCGTGACTGCTTCCGGGGCCAGGGGAT
AATCGTCAACCTCACCTTATCAAATCTTCACATATTTTTGTTTTTTTCGG
CTCTCGCCCGTTAAAAGGTGCGTGGATCGAGAACCTCACCCTCTCGGAGA
CGCGCAAGAGTCTAAACCACCACGTTCTGACCTTCGAGGAGATGCTGCAG
GAGAAGGGGCTATCGGAGTCCAACGTTCACCTGTACGTGGACATGAAGCA
CACGGAGATCGTTAGGCCCGTGCTGCACGCGGTCAGGCAAGCCGTGGACC
GCTGGGGCTGGACGGCGGACAGGATCGTCGTGGCCACTTTTCGCCAGCTG
GATCTGTTGCAGGCAAGCAAGCCGTGCGGCCCGTGTGGTTCTGCTATTTG
TTTTCCGTTTCATTTTGTCGTCCCCCATCTCTCAAAATATATTATTAATA
GGGTGATGCTCTCTCGTCAACATCTCGGCTTTGGATTGCCCCCTATAAAT
TACAAAATACGTGAAAGCTTATTGAACGCTGACATTTTGTGCAGCGGACT
TTTATATATCTGACTTGATTTTTAGAGCGTGTAGCTTACGCAGCACCCTT
TTTTTGCTGCTGATTCGCCGAGATTTTTGTCGAAATTGACAAAACCAGGT
ACATTTTTTACTCCCAATGCAAGGAACATGCACAATGGGTTATTTGTTTG
TTTCGACGGTGCCTATCGCGCTACTTCATGTATAGCTACCTATCTCTTAC
AACAGCAGTACCAGCTAAGCACTACATTGCCCCCCCCCCCTCTGGCTCGC
GATAAATACCCCCGATGTATATGCTAATCGCGGTGAAATCCTTTTGTCTC
CTGTGATAGAATCGGGTATAGAAGGATCAAATTGGTGAAGCGATTGGGTA
CGTCCCTTTTTTGTTTCCTCTGTGGGCTAGTACAGTAGTTAACCCCGATT
CGTAATTACGCGCGAAGCGAGTTTCTAGTTTCCGCCGGCACCAAAAAAAC
ACGGACTCCATTGCTACAGAGGTGTGATTCACTATCTGTAACCGGTGTAC
GACCGGAATCTCTCACAAAATAGAACAAACCGAGTCGGTGGTCTATAGTA
GTTAAGCCCGATTCCTAAAACTACTTTTTTTTCTGACACACACACCTTTC
GTCGCAAAACTTACGGGGACAAAAAAAAACAGGTGAACGCTTTCAGGCAG
GCAATCCCCGAGTTGTCGAGACTCCGCACAGCGTGCATCATGGACGGCGG
GCCTCTCACCCTCGCAAGGGACTTCAAAGCCCTGGAAGTGAACATCCTCA
GCACCGGCAAGGATCACGTCAGCCCCGATCTCGTCGCCGACTGCCAGAGA
CGCGGCATTCAAGTCTGGGTGTGGACAGTCAACAGCGTTCATTTTATGGA
ACGCCTCTTGGTGAGAAGTGGAAACCTGCGCTTGACGTTGGGGGGGGGGG
GGGGGGGGATTTGTGTGATACAAAGTTATTATTAATATTAGAAGCCGTCC
GTGCCAACATGAAAGTGAACAATTCTATCATCCCGAATGTGGATGTTGCC
TTAACGGTCGGTGCTTTTTGCCCTGTTTAACCGTTTCCCCTCCCTCGTCG
GTTCATGTTTTGTTGCTTTGCTCGGCTCCGAAAACGCCCCCCCTCCCCCG
AATGCGCTTAGAAAATGGGTGTGGATGGTCTTTGCTCGGACTACCCCGAG
CGCGTCCACGAGGCAAATAAAAAGTTCCGCCCCCAGGCGACGCAAACTGA
CGCGGCCACCTTCCCCTTCCCTCAAGGACCGGACTCTTCCGCCGACGTCG
ACCTCCGCGGCCTGGTCGCTTCCGATTCCGAATCCATAACCGATTCCGGT
ACGGAGGAATGGCAAGCCTTCGAGATGGGTCTTGAAATCGGTAACTCTGG
GTCCGGCAAGGCCGCCGCTGCCGAAGGTGCGACGGATTCCACAGCGCTGG
GTGGTTGGTTCAGTCGGTGCGACACGTGCGAAAAATCGGCGGAAAATTCC
GAGCAACAACGGTTGATGGCGGCGCTCTACGGAGACCTGGCAGGCGTTCG
GGATTTCGCGGTCGGGGCGGTGGAGGAGTCGAAGATGCTGGCGAAGGCGG
CCTCTAAGGCTGTCGCGGTGAAGGCGTTTTTGGATGGAGACGCGATGAAG
GGGACGCCGGCGAGCTCGGAGCTGAAGGCGGTGTTGGCCCTGTGTAAGGA
GGCCGAGTCGGAGGCTGAACTGGCGCTGAGGCCGTTCGTGTCTTCCGCGG
AGACGTTCCGGTGGTCCGTAGACCTTATCTCCACGGGAAAGGTGCGCGGT
GGGGTGGCCTCATTTCATGCATTGCCGTAGTTGTATAACCGTAGACCCTC
CAGGGGACGGGGGGGGGGCGTACTGGTTTGTTGCTTGCCTTCAGTCATTT
ACCATTCATCACGCATCGCTTTCGAGACGGAGCATCTTTCCTACACACTT
AATTGAGACGCCTCCAACATTTGGGCGCTCCTTACACTTCTGCTATATAT
CTCTTTTGGCATAAAATCCTTTTGCTTGTCTCAACGGGTGGAATTTCCAT
GTTTTCGTTTTTCGTGTTTTGGAAAGATCCATTGTGTGCTGTAGGTCCAC
CACGTTTGTTATATGTTGCGTGCCTTGCGATTCCCAACATTATGGTGAGA
CGCTTTTTTTTTTTTTCGTTTTTGGGTCCCCACTTTTTTGCCTTCGCCGT
TGCTTCCCGCTGCGTGCAATCTGGGTGCAGGGTCGCGAGTTCATGGCTAA
GCTACAGAGCAGCATGGAGCAAGACGAACCGCAGCCGATGCTCCCTTTCG
AGACGGCTTTCGTGTACGACCTGTTGGGGATGGCGTCCAACTAACTACAG
GCACATTATTCTGTTTTCTTGTACGAATGAGCCCGAGACGTCGTAGTGAA
CGTTGTGCCCATTATTTGTGCGCGAGATTGTCTTGTCTTTTGGAGGTGGG
GTGTCCATCAAGCCAAAGGGACGCGGTGGGAAAAGCAATTGGCGTGCTAT
GATACTACTATTACGTTTGAATTTCATTAAATTGTAGCTTGATACGTGGT
ATTAAATGTATTTTTTTGTTTTTTTAAACCTTGTGAGCTTTTGGTGTTTG
GTGAAAGTTGGATGGATTTTTTTAGTACGTCACGCGCGCAAGAATGGAGC
AACAGATGGACGACTTACCGTCGTTGTGAGCATCAACGCCAGCCACTACG
TGGGTCACTGGTGTTGTAGTTGAATAGTAGC
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10515:1094..6074+

>mRNA_D-dudresnayi_contig10515.563.1 ID=mRNA_D-dudresnayi_contig10515.563.1|Name=mRNA_D-dudresnayi_contig10515.563.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2664bp|location=Sequence derived from alignment at D-dudresnayi_contig10515:1094..6074+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGCGTCTTTCCTCGAGGCCGTCAAGCTTGGCGTGGACACGATCGAGTT
CGACGTCCTGACCACCCAGGATGGTGTCGTGATCTGTCACCACGACCCCC
TTATCGAAGAAACTGATGGCGTCTTTCCTCGAGGCCGTCAAGCTTGGCGT
GGACACGATCGAGTTCGACGTCCTGACCACCCAGGATGGTGTCGTGATCT
GTCACCACGACCCCCTTATCGAAGAAACTGGTGCGTGGATCGAGAACCTC
ACCCTCTCGGAGACGCGCAAGAGTCTAAACCACCACGTTCTGACCTTCGA
GGAGATGCTGCAGGAGAAGGGGCTATCGGAGTCCAACGTTCACCTGTACG
TGGACATGAAGCACACGGAGATCGTTAGGCCCGTGCTGCACGCGGTCAGG
CAAGCCGTGGACCGCTGGGGCTGGACGGCGGACAGGATCGTCGTGGCCAC
TTTTCGCCAGCTGGATCTGTTGCAGGTGCGTGGATCGAGAACCTCACCCT
CTCGGAGACGCGCAAGAGTCTAAACCACCACGTTCTGACCTTCGAGGAGA
TGCTGCAGGAGAAGGGGCTATCGGAGTCCAACGTTCACCTGTACGTGGAC
ATGAAGCACACGGAGATCGTTAGGCCCGTGCTGCACGCGGTCAGGCAAGC
CGTGGACCGCTGGGGCTGGACGGCGGACAGGATCGTCGTGGCCACTTTTC
GCCAGCTGGATCTGTTGCAGGTGAACGCTTTCAGGCAGGCAATCCCCGAG
TTGTCGAGACTCCGCACAGCGTGCATCATGGACGGCGGGCCTCTCACCCT
CGCAAGGGACTTCAAAGCCCTGGAAGTGAACATCCTCAGCACCGGCAAGG
ATCACGTCAGCCCCGATCTCGTCGCCGACTGCCAGAGACGCGGCATTCAA
GTCTGGGTGTGGACAGTCAACAGCGTTCATTTTATGGAACGCCTCTTGGT
GAACGCTTTCAGGCAGGCAATCCCCGAGTTGTCGAGACTCCGCACAGCGT
GCATCATGGACGGCGGGCCTCTCACCCTCGCAAGGGACTTCAAAGCCCTG
GAAGTGAACATCCTCAGCACCGGCAAGGATCACGTCAGCCCCGATCTCGT
CGCCGACTGCCAGAGACGCGGCATTCAAGTCTGGGTGTGGACAGTCAACA
GCGTTCATTTTATGGAACGCCTCTTGAAAATGGGTGTGGATGGTCTTTGC
TCGGACTACCCCGAGCGCGTCCACGAGGCAAATAAAAAGTTCCGCCCCCA
GGCGACGCAAACTGACGCGGCCACCTTCCCCTTCCCTCAAGGACCGGACT
CTTCCGCCGACGTCGACCTCCGCGGCCTGGTCGCTTCCGATTCCGAATCC
ATAACCGATTCCGGTACGGAGGAATGGCAAGCCTTCGAGATGGGTCTTGA
AATCGGTAACTCTGGGTCCGGCAAGGCCGCCGCTGCCGAAGGTGCGACGG
ATTCCACAGCGCTGGGTGGTTGGTTCAGTCGGTGCGACACGTGCGAAAAA
TCGGCGGAAAATTCCGAGCAACAACGGTTGATGGCGGCGCTCTACGGAGA
CCTGGCAGGCGTTCGGGATTTCGCGGTCGGGGCGGTGGAGGAGTCGAAGA
TGCTGGCGAAGGCGGCCTCTAAGGCTGTCGCGGTGAAGGCGTTTTTGGAT
GGAGACGCGATGAAGGGGACGCCGGCGAGCTCGGAGCTGAAGGCGGTGTT
GGCCCTGTGTAAGGAGGCCGAGTCGGAGGCTGAACTGGCGCTGAGGCCGT
TCGTGTCTTCCGCGGAGACGTTCCGGTGGTCCGTAGACCTTATCTCCACG
GGAAAGAAAATGGGTGTGGATGGTCTTTGCTCGGACTACCCCGAGCGCGT
CCACGAGGCAAATAAAAAGTTCCGCCCCCAGGCGACGCAAACTGACGCGG
CCACCTTCCCCTTCCCTCAAGGACCGGACTCTTCCGCCGACGTCGACCTC
CGCGGCCTGGTCGCTTCCGATTCCGAATCCATAACCGATTCCGGTACGGA
GGAATGGCAAGCCTTCGAGATGGGTCTTGAAATCGGTAACTCTGGGTCCG
GCAAGGCCGCCGCTGCCGAAGGTGCGACGGATTCCACAGCGCTGGGTGGT
TGGTTCAGTCGGTGCGACACGTGCGAAAAATCGGCGGAAAATTCCGAGCA
ACAACGGTTGATGGCGGCGCTCTACGGAGACCTGGCAGGCGTTCGGGATT
TCGCGGTCGGGGCGGTGGAGGAGTCGAAGATGCTGGCGAAGGCGGCCTCT
AAGGCTGTCGCGGTGAAGGCGTTTTTGGATGGAGACGCGATGAAGGGGAC
GCCGGCGAGCTCGGAGCTGAAGGCGGTGTTGGCCCTGTGTAAGGAGGCCG
AGTCGGAGGCTGAACTGGCGCTGAGGCCGTTCGTGTCTTCCGCGGAGACG
TTCCGGTGGTCCGTAGACCTTATCTCCACGGGAAAGGGTCGCGAGTTCAT
GGCTAAGCTACAGAGCAGCATGGAGCAAGACGAACCGCAGCCGATGCTCC
CTTTCGAGACGGCTTTCGTGTACGACCTGTTGGGGATGGCGTCCAACTAA
GGTCGCGAGTTCATGGCTAAGCTACAGAGCAGCATGGAGCAAGACGAACC
GCAGCCGATGCTCCCTTTCGAGACGGCTTTCGTGTACGACCTGTTGGGGA
TGGCGTCCAACTAA
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