mRNA_D-dudresnayi_contig10511.561.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10511.561.1 vs. uniprot
Match: D8LF09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF09_ECTSI) HSP 1 Score: 436 bits (1121), Expect = 3.340e-143 Identity = 251/493 (50.91%), Postives = 318/493 (64.50%), Query Frame = 3 Query: 288 VAFNGSRIDATALAKSTPSGGKTTAVGPRQIKRPRWYNKAEATIIVLLVQRLRLLDVRGVEHMLEATEDFRKEEPRDVLHRALFLMRVAPGANFRTVIQRHPRTLLVPVQKMKRVCKLINDNYPGVNMARIVERVPSIFSRNTTRLERNIDGLKKYVPEVDSTIFQAAPSMMFLPPLTVKQKVEALRWHLPGMNLHLFLKGMPTALARSKETVPRGLVELRKRFPKSSNKELVRLVESAPALMRMSGANGTLDIKVDALMTLLPGVNMTNIFANAPGVLIRNSKSLPAXXXXXXXXXXXXXXXXXXXXXXXXLYLDIDRTVKPKALWIRQAVGLEQEGLDQLIEQGPWLLKAGWGPLARLEFAVESGIARIDRPAGFVGLVRRSRAAFAATHHPAYAEFLQRCLADEEVEEAS------WPQGEDVP-PNAWGSAS----------ARGPKPKRPESREEASSRVVGT-TIKLKNAAVTEGVVIM--DSSDED 1706 +A N S AT+LA + S + QI RPRWYNKAE IIVLL QRLR++D++GVEHML+A F KE+PRDV RAL+L + APGANFRTVIQRHPRTLLVPV KM+ V L+ NTTRLE NI GLKKY PEV+S IFQAAPSM++LP TV++KV ALR LPG++L+ FLKGMPTALARSK+TVPRG+ +LR+RFP +SN+ELVR+VESAP+L+RMSGANG+L IKV L L P N+T + + PG++ YLD+DRTV+ KA+WI+QAVGL+QEGLD+L+EQGPWLLKAGWGPLARLEFA+E+G+A +DRP+ LVRRSR AFA HH +Y FL++ L +E +E +G D+ P AW +A+ +R PK+ + AS+ + G T +L+NA T GVV+ D +ED Sbjct: 1 MALNASSDAATSLAVAPTSN----SASGYQITRPRWYNKAEVAIIVLLCQRLRMIDLKGVEHMLDAAPKFAKEDPRDVWQRALYLSKAAPGANFRTVIQRHPRTLLVPVHKMQHVLSLLXXXXXXXXXXXXXXXXXXXXXXNTTRLEDNIAGLKKYAPEVNSAIFQAAPSMVYLPAHTVEEKVAALRACLPGIDLYNFLKGMPTALARSKQTVPRGMDQLRERFPSASNRELVRIVESAPSLVRMSGANGSLSIKVTKLQELFPSANVTKMVSRTPGIM----------------------------------YLDVDRTVRSKAMWIQQAVGLDQEGLDRLVEQGPWLLKAGWGPLARLEFAIEAGVATVDRPSTIFSLVRRSRLAFARAHHESYGSFLRKKLEEEAIELGGREGXXXXXEGGDLHHPLAWRAAAGNAVDGGRRVSRPVSPKKGSGPKAASATLGGKRTARLENAGATPGVVLESGDGKEED 455
BLAST of mRNA_D-dudresnayi_contig10511.561.1 vs. uniprot
Match: A0A6H5K0X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0X3_9PHAE) HSP 1 Score: 271 bits (692), Expect = 1.770e-80 Identity = 163/358 (45.53%), Postives = 214/358 (59.78%), Query Frame = 3 Query: 798 MMFLPPLTVKQKVEALRWHLPGMNLHLFLKGMPTALARSKETVPRGLVELRKRFPKSSNKELVRLVESAPALMRMSGANGTLDIK-------------VDALMTLLPGVNMTNIFANAPGVLIRNSKSLPAXXXXXXXXXXXXXXXXXXXXXXXXL----------------------------------YLDIDRTVKPKALWIRQAVGLEQEGLDQLIEQGPWLLKAGWGPLARLEFAVESGIARIDRPAGFVGLVRRSRAAFAATHHPAYAEFLQRCLADEEVEEASWPQGEDVP----PNAWGSAS----------ARGPKPKRPESREEASSRVVGT-TIKLKNAAVTEGVVI 1685 M++LP TV++KV ALR LPG++L+ FLKGMPTALARSK+TVPRG+ +LR+RFP +SN+ELVR+VESAP+L+RMSGANG+L IK VD LM+LLPGVN+TN+ +NAPGVLIR SLP + YLD+DRTV+ KA+WI+QAVGL+QEGLD+L+EQGPWLLKAGWGPLARLEFA+E+G+A +DRP+ LVRRSR AFA +H +Y FL++ + +E +E+ P AW +A+ +R PK+ AS+ + G T KL++A T GVV+ Sbjct: 1 MVYLPAHTVEEKVAALRACLPGIDLYNFLKGMPTALARSKQTVPRGMDQLRERFPSASNRELVRIVESAPSLVRMSGANGSLSIKASAERHFFVSVPTVDNLMSLLPGVNVTNVISNAPGVLIRGVTSLPTKDGAILSEQPPASFLCDHAFKTMTMVSQPRSHAGQVTKLQELFPSANVTKMVSRTPGIMYLDVDRTVRSKAMWIQQAVGLDQEGLDRLVEQGPWLLKAGWGPLARLEFAIEAGVATVDRPSTIFSLVRRSRLAFARAYHESYGSFLRKKIEEEAIEQGXXXXXXXXXDLRHPLAWRAAAGNDVEGGRRVSRPVSPKKGSGPTAASATLDGKRTAKLEHAGATAGVVL 358
BLAST of mRNA_D-dudresnayi_contig10511.561.1 vs. uniprot
Match: A0A6H5K0J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0J9_9PHAE) HSP 1 Score: 110 bits (275), Expect = 5.780e-25 Identity = 63/114 (55.26%), Postives = 76/114 (66.67%), Query Frame = 3 Query: 288 VAFNGSRIDATALAKSTPSGGKTTAVGPRQIKRPRWYNKAEATIIVLLVQRLRLLDVRGVEHMLEATEDFRKEEP-----------RDVLHRALFLMRVAPGANFRTVIQRHPR 596 +A N S AT+LA + P+ +A QI RPRWYNKAE IIVLL QRLR++D++GVEHML+A F KE+P RDV RAL+L + APGANFRTVIQRHPR Sbjct: 1 MALNASSDAATSLAVA-PASNSASAY---QITRPRWYNKAEVAIIVLLCQRLRMIDLKGVEHMLDAAPKFAKEDPVREPVRSLKLQRDVWQRALYLSKAAPGANFRTVIQRHPR 110 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10511.561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10511.561.1 >prot_D-dudresnayi_contig10511.561.1 ID=prot_D-dudresnayi_contig10511.561.1|Name=mRNA_D-dudresnayi_contig10511.561.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=637bp MAGGYHANDMNILLLLLLVVLLVAASQGFVVSSHTTCRALLAQQHATGKTback to top mRNA from alignment at D-dudresnayi_contig10511:4289..9979- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10511.561.1 ID=mRNA_D-dudresnayi_contig10511.561.1|Name=mRNA_D-dudresnayi_contig10511.561.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=5691bp|location=Sequence derived from alignment at D-dudresnayi_contig10511:4289..9979- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10511:4289..9979- >mRNA_D-dudresnayi_contig10511.561.1 ID=mRNA_D-dudresnayi_contig10511.561.1|Name=mRNA_D-dudresnayi_contig10511.561.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=3822bp|location=Sequence derived from alignment at D-dudresnayi_contig10511:4289..9979- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |