mRNA_D-dudresnayi_contig10511.560.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10511.560.1
Unique NamemRNA_D-dudresnayi_contig10511.560.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10511.560.1 vs. uniprot
Match: D8LF08_ECTSI (Diphthine methyl ester synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF08_ECTSI)

HSP 1 Score: 410 bits (1055), Expect = 2.260e-135
Identity = 202/241 (83.82%), Postives = 215/241 (89.21%), Query Frame = 2
Query:    2 EAFYGKEVLLADRNVVESEADSIYASAKDDDVSFLVVGDPLCATTHTDLIIRARELGVKVEVIHNASVMGAVASCGLQLYNFGQTVSIPLWNEKWEPDSFHEKIRVNKANGMHTLCLLDIKVKEPDFEKMARGKIAYLPPRYMTVGTALEQLLEVEARKGEGVYGPDSLCVGLARLGQPTQTIAAGTMSELLEVDFGGPLHCLVICGTTHPLEDELLKWHRADHQPPAEGVPTEVEIESAK 724
            EAFYGK+++LADRNVVESEADSIYA+AKD+DVSFLVVGDPLCATTHTDLIIRARELGVKVEVIHNASVMGAVASCGLQLYNFGQTVSIPLWNE WEPDSF+EKIRVNK NGMHTLCLLDIKVKEPDF KMARGK++YLPPR+M+VGTALEQLLEVEAR+GEGVYGPDS CVGLARLGQPTQ I AGTMSELL VDFG PLH ++I GTTHPLEDELLKWHR           T V  E  K
Sbjct:   47 EAFYGKDIVLADRNVVESEADSIYATAKDEDVSFLVVGDPLCATTHTDLIIRARELGVKVEVIHNASVMGAVASCGLQLYNFGQTVSIPLWNENWEPDSFYEKIRVNKMNGMHTLCLLDIKVKEPDFAKMARGKVSYLPPRFMSVGTALEQLLEVEARRGEGVYGPDSQCVGLARLGQPTQQIVAGTMSELLGVDFGEPLHSVIINGTTHPLEDELLKWHRVTDSAGTAVEGTTVAAEGGK 287          
BLAST of mRNA_D-dudresnayi_contig10511.560.1 vs. uniprot
Match: K3W961_GLOUD (Diphthine methyl ester synthase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W961_GLOUD)

HSP 1 Score: 330 bits (845), Expect = 1.200e-104
Identity = 160/222 (72.07%), Postives = 180/222 (81.08%), Query Frame = 2
Query:    8 FYGKEVLLADRNVVESEADSIYASAKDDDVSFLVVGDPLCATTHTDLIIRARELGVKVEVIHNASVMGAVASCGLQLYNFGQTVSIPLWNEKWEPDSFHEKIRVNKANGMHTLCLLDIKVKEPDFEKMARGKIAYLPPRYMTVGTALEQLLEVEARKGEGVYGPDSLCVGLARLGQPTQTIAAGTMSELLEVDFGGPLHCLVICGTTHPLEDELLKWHRADH 673
            FY +EV+LADR+ VE+ AD I   AKD DVSFLVVGDPLCATTH+DLIIRA+EL +KVEVIHNASVMGA  SCGLQLY+FGQT+SIP + E+W PDSF+EKI  NK  GMHTLCLLDIKVKEPDFE M RGKI YLPPR+MTV  A+EQL+EVE ++ EG Y  DSLCVG+ARLGQ  QTI AGTM ELL  DFG PLHCLVI G  HPLE+E+LK  R  H
Sbjct:   49 FYEREVVLADRDCVETGADQILEDAKDHDVSFLVVGDPLCATTHSDLIIRAQELDIKVEVIHNASVMGAAGSCGLQLYSFGQTISIPFFREEWRPDSFYEKILYNKKGGMHTLCLLDIKVKEPDFEAMCRGKIVYLPPRFMTVNQAVEQLIEVEEKRQEGAYTRDSLCVGMARLGQKDQTIIAGTMEELLTADFGAPLHCLVIAGDVHPLEEEMLKQFRIKH 270          
BLAST of mRNA_D-dudresnayi_contig10511.560.1 vs. uniprot
Match: A0A2D4BDS7_PYTIN (Diphthine methyl ester synthase n=3 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDS7_PYTIN)

HSP 1 Score: 325 bits (833), Expect = 7.600e-103
Identity = 156/219 (71.23%), Postives = 180/219 (82.19%), Query Frame = 2
Query:    8 FYGKEVLLADRNVVESEADSIYASAKDDDVSFLVVGDPLCATTHTDLIIRARELGVKVEVIHNASVMGAVASCGLQLYNFGQTVSIPLWNEKWEPDSFHEKIRVNKANGMHTLCLLDIKVKEPDFEKMARGKIAYLPPRYMTVGTALEQLLEVEARKGEGVYGPDSLCVGLARLGQPTQTIAAGTMSELLEVDFGGPLHCLVICGTTHPLEDELLKWHR 664
            FYG+EV+LADR+ VE+ AD I   AKD +V+FLVVGDPLCATTHTDLIIRAREL + VEV+HNASVMGA ASCGLQLY+FGQTVSIP + E+W PDSF++KI  N+  GMHTLCLLDIKVKEPDFE MARG+I YLPPR+MTV  ALEQL+EVE R+ EG Y  D++CVG+ARLGQ  QTI AGTM EL   DFGGPLHCLVI G  H +E+E+LK  R
Sbjct:   49 FYGREVVLADRDCVETGADQILDGAKDGEVAFLVVGDPLCATTHTDLIIRARELEIPVEVVHNASVMGAAASCGLQLYSFGQTVSIPFFTEEWRPDSFYDKIMYNRKGGMHTLCLLDIKVKEPDFEAMARGRIVYLPPRFMTVNQALEQLIEVEERRQEGAYSKDTMCVGMARLGQKDQTIIAGTMDELRSADFGGPLHCLVIAGDVHLMEEEMLKQFR 267          
BLAST of mRNA_D-dudresnayi_contig10511.560.1 vs. uniprot
Match: A0A8K1CB37_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CB37_PYTOL)

HSP 1 Score: 322 bits (826), Expect = 8.360e-102
Identity = 155/223 (69.51%), Postives = 180/223 (80.72%), Query Frame = 2
Query:    8 FYGKEVLLADRNVVESEADSIYASAKDDDVSFLVVGDPLCATTHTDLIIRARELGVKVEVIHNASVMGAVASCGLQLYNFGQTVSIPLWNEKWEPDSFHEKIRVNKANGMHTLCLLDIKVKEPDFEKMARGKIAYLPPRYMTVGTALEQLLEVEARKGEGVYGPDSLCVGLARLGQPTQTIAAGTMSELLEVDFGGPLHCLVICGTTHPLEDELLKWHRADHQ 676
            FYG+EV+LADR+ VE+ AD I   AKD+DV+FLVVGDPLCATTHTDLIIRAREL + V+VIHNASVMGA ASCGLQLY+FGQTVSIP + E+W PDSF+EKI  NK  GMHTL LLDIKVKEPDF+ MARG+I YLPPR+MTV  A+EQL+E+E ++ EG Y  D+LCVG+ARLGQ  Q I AGTM EL  VDFG PLHCLVI G  H +E+E+LK  R   Q
Sbjct:   49 FYGREVILADRDCVETGADQILDGAKDEDVAFLVVGDPLCATTHTDLIIRARELDIPVQVIHNASVMGAAASCGLQLYSFGQTVSIPFFTEEWRPDSFYEKILYNKKGGMHTLALLDIKVKEPDFDAMARGRIVYLPPRFMTVNQAVEQLIEIEEKRQEGAYSKDTLCVGMARLGQSDQKIVAGTMEELRHVDFGAPLHCLVIAGDVHLMEEEMLKQFRVSEQ 271          
BLAST of mRNA_D-dudresnayi_contig10511.560.1 vs. uniprot
Match: H3GB03_PHYRM (Diphthine methyl ester synthase n=24 Tax=Phytophthora TaxID=4783 RepID=H3GB03_PHYRM)

HSP 1 Score: 320 bits (820), Expect = 6.990e-101
Identity = 147/218 (67.43%), Postives = 181/218 (83.03%), Query Frame = 2
Query:    8 FYGKEVLLADRNVVESEADSIYASAKDDDVSFLVVGDPLCATTHTDLIIRARELGVKVEVIHNASVMGAVASCGLQLYNFGQTVSIPLWNEKWEPDSFHEKIRVNKANGMHTLCLLDIKVKEPDFEKMARGKIAYLPPRYMTVGTALEQLLEVEARKGEGVYGPDSLCVGLARLGQPTQTIAAGTMSELLEVDFGGPLHCLVICGTTHPLEDELLKWH 661
            FYG+EV+LADR+ VE+ AD I+A AKDDDV+FLVVGDPLCATTH+DLI+RA+EL ++VEVIHNASVMGA  +CGLQLY+FGQTVSIP + ++W PDSF+EKI+ N+  GMHTLCLLDIKVKEPDFE M RG+  +LPPR+MTV  A+EQL+E+E ++ EG Y  D++CVG+ARLGQ  QTI AGTM ELL  DFG PLHCL I G  HPLE+E+ + +
Sbjct:   49 FYGREVILADRDCVETGADQIFADAKDDDVAFLVVGDPLCATTHSDLILRAKELDIRVEVIHNASVMGAAGACGLQLYSFGQTVSIPFFRDEWRPDSFYEKIQYNRRGGMHTLCLLDIKVKEPDFEAMCRGRTVFLPPRFMTVNQAIEQLIEIEEKRQEGAYSKDTVCVGMARLGQKDQTIIAGTMEELLTADFGAPLHCLAITGEVHPLEEEVSRLY 266          
BLAST of mRNA_D-dudresnayi_contig10511.560.1 vs. uniprot
Match: T0PY96_SAPDV (Diphthine methyl ester synthase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0PY96_SAPDV)

HSP 1 Score: 317 bits (812), Expect = 1.370e-99
Identity = 148/215 (68.84%), Postives = 176/215 (81.86%), Query Frame = 2
Query:    8 FYGKEVLLADRNVVESEADSIYASAKDDDVSFLVVGDPLCATTHTDLIIRARELGVKVEVIHNASVMGAVASCGLQLYNFGQTVSIPLWNEKWEPDSFHEKIRVNKANGMHTLCLLDIKVKEPDFEKMARGKIAYLPPRYMTVGTALEQLLEVEARKGEGVYGPDSLCVGLARLGQPTQTIAAGTMSELLEVDFGGPLHCLVICGTTHPLEDELL 652
            +YG+EV+LADR  VES A+ IY  AKD +++FLVVGDP CATTHTDLI+RA+E+G +VEVIHNASVMGA  +CGLQLY++GQTVSIP + E W PDSF++K+  N+  G+HTLCLLDIKVKEPDFE MARG+  YLPPR+MTV  ALEQLLE+E R+ E VY  D++CVG+ARLGQPTQ I AGTM ELL VDFGGPLHCL I G  H LE E+L
Sbjct:   49 YYGREVILADRECVESGAEVIYEQAKDKNIAFLVVGDPFCATTHTDLILRAQEIGARVEVIHNASVMGAAGACGLQLYHYGQTVSIPFFTEGWRPDSFYDKVAFNRKGGLHTLCLLDIKVKEPDFEAMARGRTVYLPPRFMTVNEALEQLLEIEDRRQENVYSRDTMCVGMARLGQPTQCIVAGTMQELLTVDFGGPLHCLAIAGDVHILEQEML 263          
BLAST of mRNA_D-dudresnayi_contig10511.560.1 vs. uniprot
Match: A0A3R7YWX3_9STRA (Diphthine methyl ester synthase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7YWX3_9STRA)

HSP 1 Score: 315 bits (808), Expect = 3.830e-99
Identity = 146/216 (67.59%), Postives = 178/216 (82.41%), Query Frame = 2
Query:    8 FYGKEVLLADRNVVESEADSIYASAKDDDVSFLVVGDPLCATTHTDLIIRARELGVKVEVIHNASVMGAVASCGLQLYNFGQTVSIPLWNEKWEPDSFHEKIRVNKANGMHTLCLLDIKVKEPDFEKMARGKIAYLPPRYMTVGTALEQLLEVEARKGEGVYGPDSLCVGLARLGQPTQTIAAGTMSELLEVDFGGPLHCLVICGTTHPLEDELLK 655
            FYG+EV+L DR++VE+ AD I+A AKD+DV+FLVVGDPLCATTH+DLI+RA EL +KVEVIHNASVMGA  +CGLQLY+FGQTVSIP + ++W PDSF++KI  N+  GMHTLCLLDIKVKEPDFE M  G+  +LPPR+MTV  ALEQL+E+E ++ +G Y  D++CVG+ARLGQ  Q I AGTM ELL VDFG PLHCL I G  HPLE+E+LK
Sbjct:   49 FYGREVILTDRDLVETGADQIFADAKDNDVAFLVVGDPLCATTHSDLILRAVELDIKVEVIHNASVMGAAGACGLQLYSFGQTVSIPFFRDEWRPDSFYDKIHYNRRGGMHTLCLLDIKVKEPDFEAMCHGRTVFLPPRFMTVNQALEQLIEIEEKRQDGAYTKDTMCVGMARLGQKDQMIIAGTMEELLSVDFGAPLHCLAITGEVHPLEEEMLK 264          
BLAST of mRNA_D-dudresnayi_contig10511.560.1 vs. uniprot
Match: A0A484DUV5_BRELC (Diphthine methyl ester synthase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DUV5_BRELC)

HSP 1 Score: 314 bits (805), Expect = 1.720e-98
Identity = 147/216 (68.06%), Postives = 179/216 (82.87%), Query Frame = 2
Query:    8 FYGKEVLLADRNVVESEADSIYASAKDDDVSFLVVGDPLCATTHTDLIIRARELGVKVEVIHNASVMGAVASCGLQLYNFGQTVSIPLWNEKWEPDSFHEKIRVNKANGMHTLCLLDIKVKEPDFEKMARGKIAYLPPRYMTVGTALEQLLEVEARKGEGVYGPDSLCVGLARLGQPTQTIAAGTMSELLEVDFGGPLHCLVICGTTHPLEDELLK 655
            FYG+E++LADR+ VE+ AD I+A AK++DV+FLVVGDPLCATTH DLI+RA++LG++VEVIHNASVMGA ASCGLQLY+FGQTVSIP + ++W PDSF+EKI+ N+  GMHTLCLLDIKVKEPDFE M RG+  +LPPR+MTV  A+EQLLE+EA++ E  Y   +LCVG+ARLGQ  QTI AGTM ELL  +FG PLHCL I G  HPLE E+ K
Sbjct:   49 FYGREIILADRDCVETGADEIFADAKNNDVAFLVVGDPLCATTHADLILRAKKLGIQVEVIHNASVMGAAASCGLQLYSFGQTVSIPFFRDEWRPDSFYEKIKYNRLGGMHTLCLLDIKVKEPDFEAMCRGRTVFLPPRFMTVNQAIEQLLEIEAKRQEEAYTKSTLCVGMARLGQKDQTIIAGTMEELLIQEFGAPLHCLAIAGDVHPLEQEVRK 264          
BLAST of mRNA_D-dudresnayi_contig10511.560.1 vs. uniprot
Match: A0A024TAC1_9STRA (Diphthine methyl ester synthase n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TAC1_9STRA)

HSP 1 Score: 314 bits (804), Expect = 2.500e-98
Identity = 152/234 (64.96%), Postives = 183/234 (78.21%), Query Frame = 2
Query:    8 FYGKEVLLADRNVVESEADSIYASAKDDDVSFLVVGDPLCATTHTDLIIRARELGVKVEVIHNASVMGAVASCGLQLYNFGQTVSIPLWNEKWEPDSFHEKIRVNKANGMHTLCLLDIKVKEPDFEKMARGKIAYLPPRYMTVGTALEQLLEVEARKGEGVYGPDSLCVGLARLGQPTQTIAAGTMSELLEVDFGGPLHCLVICGTTHPLEDELLKWHRADHQPPAEGVPTEVE 709
            FYG+EV+LADR+ VE+ A+ IYA+AKD +++FLVVGDP CATTH+DLI+RA+E+G KVEVIHNASVMGA  +CGLQLY++GQTVSIP +N+ W PDSF++KI  N+  G+HTLCLLDIKVKEPDFE MARG+  +LPPR+MTV  A+EQLLEVE ++ EGVY  D+LCVGLARLGQ  Q I AGTM+ELL VDFG PLH LVI G  H LE E+L         PA     E E
Sbjct:   49 FYGREVILADRDCVETGAEVIYANAKDQNIAFLVVGDPFCATTHSDLILRAQEIGAKVEVIHNASVMGAAGACGLQLYHYGQTVSIPFFNDNWRPDSFYDKIAFNRKGGLHTLCLLDIKVKEPDFEAMARGRTVFLPPRFMTVNQAVEQLLEVEDKRQEGVYSRDTLCVGLARLGQTDQKIVAGTMAELLTVDFGAPLHSLVIAGDVHVLEQEMLAQFSVKLLQPAAAKAVEEE 282          
BLAST of mRNA_D-dudresnayi_contig10511.560.1 vs. uniprot
Match: A0A835ZI35_9STRA (Diphthine methyl ester synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI35_9STRA)

HSP 1 Score: 311 bits (796), Expect = 5.390e-97
Identity = 147/236 (62.29%), Postives = 184/236 (77.97%), Query Frame = 2
Query:    2 EAFYGKEVLLADRNVVESEADSIYASAKDDDVSFLVVGDPLCATTHTDLIIRARELGVKVEVIHNASVMGAVASCGLQLYNFGQTVSIPLWNEK--WEPDSFHEKIRVNKANGMHTLCLLDIKVKEPDFEKMARGKIAYLPPRYMTVGTALEQLLEVEARKGEGVYGPDSLCVGLARLGQPTQTIAAGTMSELLEVDFGGPLHCLVICGTTHPLEDELLKWHRADHQPPAEGVPTE 703
            EAFYG+ ++ ADR  VESEA+SIY SA  +DV+FLVVGDP CATTHTDL++RA +LG+KVEV+HNASVMGA ASCGLQLYNFG TVS+ LW+++  W P SF+EK+  N+  GMHTLCLLDIKVKEPDF +MA+G++ YLPPR+MT+  A+EQLLEVE  +  G Y  D++ VGLARLGQP+Q I +GT+ EL+ VDFG PLH LVI G THP+E+E+L  +      P    P+E
Sbjct:   47 EAFYGRPIIYADRETVESEAESIYESAATEDVAFLVVGDPFCATTHTDLMMRAHKLGIKVEVVHNASVMGAAASCGLQLYNFGHTVSLCLWDKEMDWTPSSFYEKVLYNRKGGMHTLCLLDIKVKEPDFAEMAKGRVRYLPPRFMTIAQAVEQLLEVETERKAGAYTKDTMAVGLARLGQPSQLIVSGTLDELITVDFGAPLHSLVIAGETHPIEEEVLAMYAITADTPRAAPPSE 282          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10511.560.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF08_ECTSI2.260e-13583.82Diphthine methyl ester synthase n=2 Tax=Ectocarpus... [more]
K3W961_GLOUD1.200e-10472.07Diphthine methyl ester synthase n=1 Tax=Globispora... [more]
A0A2D4BDS7_PYTIN7.600e-10371.23Diphthine methyl ester synthase n=3 Tax=Pythium in... [more]
A0A8K1CB37_PYTOL8.360e-10269.51Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3GB03_PHYRM6.990e-10167.43Diphthine methyl ester synthase n=24 Tax=Phytophth... [more]
T0PY96_SAPDV1.370e-9968.84Diphthine methyl ester synthase n=3 Tax=Saprolegni... [more]
A0A3R7YWX3_9STRA3.830e-9967.59Diphthine methyl ester synthase n=1 Tax=Peronospor... [more]
A0A484DUV5_BRELC1.720e-9868.06Diphthine methyl ester synthase n=1 Tax=Bremia lac... [more]
A0A024TAC1_9STRA2.500e-9864.96Diphthine methyl ester synthase n=3 Tax=Aphanomyce... [more]
A0A835ZI35_9STRA5.390e-9762.29Diphthine methyl ester synthase n=1 Tax=Tribonema ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10511contigD-dudresnayi_contig10511:575..4490 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score287.3
Seed ortholog evalue4.8e-75
Seed eggNOG ortholog2880.D8LF08
Preferred nameDPH5
KEGG rclassRC00003,RC03382
KEGG koko:K00586,ko:K07870,ko:K17081
KEGG ReactionR11165
KEGG Pathwayko04137,ko04214,map04137,map04214
GOsGO:0003674,GO:0003824,GO:0004164,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006417,GO:0006448,GO:0006464,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009056,GO:0009058,GO:0009109,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010608,GO:0016740,GO:0016741,GO:0017144,GO:0017182,GO:0017183,GO:0018193,GO:0018202,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0032259,GO:0032268,GO:0034248,GO:0036211,GO:0042737,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044273,GO:0044424,GO:0044444,GO:0044464,GO:0046500,GO:0050789,GO:0050794,GO:0050843,GO:0051171,GO:0051186,GO:0051187,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1900247,GO:1901564,GO:1901575,GO:2000112,GO:2000765
EggNOG free text desc.diphthine synthase activity
EggNOG OGsCOG1798@1,KOG3123@2759
EC2.1.1.314
COG Functional cat.J
BiGG ReactioniMM904.YLR172C,iND750.YLR172C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03012,ko03029,ko04031,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDiphthine synthase, putative
Ec32 orthologEc-21_006260.1
Exons5
Model size2190
Cds size537
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927553.6484172-UTR-D-dudresnayi_contig10511:574..7521622927553.6484172-UTR-D-dudresnayi_contig10511:574..752Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10511 575..752 +
1690556804.780677-UTR-D-dudresnayi_contig10511:574..7521690556804.780677-UTR-D-dudresnayi_contig10511:574..752Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10511 575..752 +
1622927553.6737525-UTR-D-dudresnayi_contig10511:1252..12791622927553.6737525-UTR-D-dudresnayi_contig10511:1252..1279Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10511 1253..1279 +
1690556804.8058267-UTR-D-dudresnayi_contig10511:1252..12791690556804.8058267-UTR-D-dudresnayi_contig10511:1252..1279Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10511 1253..1279 +
1622927553.7461994-UTR-D-dudresnayi_contig10511:3042..44901622927553.7461994-UTR-D-dudresnayi_contig10511:3042..4490Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10511 3043..4490 +
1690556804.8619893-UTR-D-dudresnayi_contig10511:3042..44901690556804.8619893-UTR-D-dudresnayi_contig10511:3042..4490Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10511 3043..4490 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927553.6942542-CDS-D-dudresnayi_contig10511:1279..14021622927553.6942542-CDS-D-dudresnayi_contig10511:1279..1402Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10511 1280..1402 +
1690556804.8233418-CDS-D-dudresnayi_contig10511:1279..14021690556804.8233418-CDS-D-dudresnayi_contig10511:1279..1402Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10511 1280..1402 +
1622927553.7102816-CDS-D-dudresnayi_contig10511:1850..19551622927553.7102816-CDS-D-dudresnayi_contig10511:1850..1955Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10511 1851..1955 +
1690556804.8337946-CDS-D-dudresnayi_contig10511:1850..19551690556804.8337946-CDS-D-dudresnayi_contig10511:1850..1955Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10511 1851..1955 +
1622927553.721948-CDS-D-dudresnayi_contig10511:2442..25761622927553.721948-CDS-D-dudresnayi_contig10511:2442..2576Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10511 2443..2576 +
1690556804.8434527-CDS-D-dudresnayi_contig10511:2442..25761690556804.8434527-CDS-D-dudresnayi_contig10511:2442..2576Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10511 2443..2576 +
1622927553.734279-CDS-D-dudresnayi_contig10511:2867..30421622927553.734279-CDS-D-dudresnayi_contig10511:2867..3042Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10511 2868..3042 +
1690556804.8530385-CDS-D-dudresnayi_contig10511:2867..30421690556804.8530385-CDS-D-dudresnayi_contig10511:2867..3042Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10511 2868..3042 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10511.560.1prot_D-dudresnayi_contig10511.560.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10511 1280..3042 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10511.560.1

>prot_D-dudresnayi_contig10511.560.1 ID=prot_D-dudresnayi_contig10511.560.1|Name=mRNA_D-dudresnayi_contig10511.560.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=179bp
MGAVASCGLQLYNFGQTVSIPLWNEKWEPDSFHEKIRVNKANGMHTLCLL
DIKVKEPDFEKMARGKIAYLPPRYMTVGTALEQLLEVEARKGEGVYGPDS
LCVGLARLGQPTQTIAAGTMSELLEVDFGGPLHCLVICGTTHPLEDELLK
WHRADHQPPAEGVPTEVEIESAKEETPR*
back to top

mRNA from alignment at D-dudresnayi_contig10511:575..4490+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10511.560.1 ID=mRNA_D-dudresnayi_contig10511.560.1|Name=mRNA_D-dudresnayi_contig10511.560.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=3916bp|location=Sequence derived from alignment at D-dudresnayi_contig10511:575..4490+ (Desmarestia dudresnayi DdudBR16 monoicous)
GGAAGCTTTTTACGGTAAGGAGGTGCTGCTGGCCGATCGCAACGTGGTGG AATCAGAGGCGGACAGCATCTACGCCAGCGCAAAGGACGATGACGTGTCT TTCCTCGTGGTCGGAGACCCGCTTTGTGCCACGACCCACACGGACCTCAT CATTAGGGCCAGGGAACTGGGGGTTAAGGTGAATTGATTTATTCCCTTAT TGTGTACGTTTTCCGCCTCTTGCTCTACTGCTGCTACTGTCTCTGACATC GACACGCGCGTTAGTCGGGTTGATGATCGATATTACGCACTTCCTTTGTG TGCAGAGCTATTCGAAGAATTTTCCACGAGAAGATGCGCGAACGCCGAAG CGAAGTGGTGGTTTCCTGGCTAGTATAGCATACTGTCATGGATGAATGCT GCGATATTGGAAGACTTTTGCGGTGTGAGGTGAAGTTTGTTGGCCCAAAA CAGCAATAGATGCGGGGAAGAAAAAACACGAGATCGTGCATGGTATGGTA TAAAGTTTCAACCCTTGCTGCGCGCTGGAGTCGGGGCCTATTTACACGAC GTAGCGCACCCACCCCGCCCCTCACCCCCCTAATTTTCTAATTTTGACGT CGCGTTCGCTTTGTGCTGACTGACGGGTGCCTGGTTGATACCAATGCTTG GATGTTGCCGGTCCATTCCCGTACGAAGGTGGAGGTAATCCACAACGCTT CTGTGATGGGTGCCGTGGCATCTTGCGGGCTGCAGCTTTACAATTTCGGG CAGACGGTGTCCATCCCTCTGTGGAATGAAAAGTGGGAGCCGGACAGCTT CCACGAGAAAATCAGGGTCAACAAGGCGGTAAGGAGCTGCAATCAAGGCC TTATTTTCCCACCGTATCTCTGACCGCAGTTCTGTGTACTGCCGACGTAG TGTGCTGCGCTTGGAACACGGCACTACATGCAGGTGGCTTTTACGTGGTA CCGATGCGCAATGGGAGATGTTTCATACTGTTGACAGGGCACACATACGG GCGTCGTCCGTGTATGTACGCTAATTTCACACACACTCGTACGTCACGGC CCACGCCGAAATCTTGGCACAGTTTTATAACATTTAGAAGGACTTCGAAC AGGCGCCACGGCGAGACATTTCGTAGCAGTCCCTCCCTCGCTCGTCACCG CGACGTGCCATACCGTTCTTGTGCCCACGACCGGCAAAGCAAGCTTGTCG GTACCGGGGTGGGCCGTGCTGAGCGCGCTCTTTGTGTTTGACGGTTGTAC TTGGCTCTTCCGTGCGCCCCCCACAGAACGGCATGCACACCTTGTGCTTG TTGGACATCAAAGTCAAGGAGCCAGACTTCGAGAAGATGGCCAGGGGAAA GATCGCGTACCTGCCACCACGGTACATGACGGTCAGTAGTGATACAGTGT GTTACTATAGTTTCAGTTTCCCTGACAGTACCTTGGTACCGCCATTTTAT ATTGGCGACGGACGGACGTTGTACGCCTCGATGGTGACTTTCTGTGTTGC CATGTTCTGAATAGTTGCCACCCTCCAAATATTCGTGGGGTACGGCGTTG TGTCCTTTGCGTCTCTTCGCACTGTATATAGTGGTAGTGTATACCACAGT ATATTTCATACTTCAATACGTTCGCCGAGAAGACGATCTTAGACAGTCGA GCGCCATCACAGACAGTGCAATGCTGTCCATAGTAGGGAGTGAAGGTAAG GTGTGTATGCGTAGACGCAATTTTACATTTGGCGCGGCTAAAACGTGTTT GCTGTGTTGTTGCTGATTGAATCATCGCGCTGGCACGCTCGTATCGCCAA GCCACCGCGCCACCTATTCACCTTTGTGCACGGTCTCACGTCGTGGGTCT CCGCTGTCGCTCGGAAAGGTGGGCACGGCATTAGAACAGCTGCTGGAGGT AGAAGCGAGGAAAGGTGAAGGGGTGTACGGGCCGGACTCGTTGTGCGTGG GGCTCGCTAGACTGGGGCAACCGACACAAACAATCGCGGCGGGAACAATG AGGTGAGAAGGGGACAGGGTCGAGGCCTTGCTAATGGGAATAAAATGTTC GTGTGGAAGAGTTGTTGGACATGGAGCGATCCTAATGTGAGCAGCTGTTG TATAGAGCGTTCGGATGTCCGTGGCACTCATTCCTCGCTTTTTGTGAGAC AAACCCATTCTCCGTTGAATGACCGAGCCCGAACATGTAGACGAATCTCT GCCTTGCCAACATCCCGTGAGCGAGATGTAAACGCGTGTCAACGTGTGAC GTGCCGACGCTTGCCGTGTTCCGGTGCTGCACTCTTTTTACAGCGAGTTG CTAGAGGTGGATTTTGGCGGTCCCTTGCATTGCCTCGTCATATGCGGCAC GACTCATCCTTTGGAAGACGAACTGCTCAAGTGGCACAGGGCGGACCATC AGCCGCCGGCGGAGGGGGTGCCTACAGAAGTAGAAATAGAGAGCGCCAAG GAAGAAACGCCTCGGTGACGGTATCTAGCGCCGGCGCGTTTCTGCTGCAT CTCGAACCTTTGGTCGGTGTAGAGCAGTACTATGATTTCAGTACTATTTT TGCACCCTTCGTGGGAGCCGATAGATTTGGTGTTGTGTGCGGCGTGTCCT TGTTCCCTGGGCTACGGGTAACCAATTGGTAATGCTTTAGTGGCATTTTT AACGGTGAGGTTGTGACTTCGACCGAGGGATCGAGTAGAAGAGCGCAACG GAAGCACCGCCGCGAATATTGCATGTTGACGTCGACAGAGACGAGTTTTC CCTGTTTCTTGGCGAGTTGACCAATCTCTGCCGTGATTGATGCTTCTGGG ACAAACTGTATAACGCCATCAAATCCACGTCAGCATCAGGAGTGTCACGT CGCGGTCGGCAATATTTACCTACTGTATAATAGGCCACTTTGCTTTAGTT CCGATGAGGTCTACATAATATGTTTGGATTCCCCACGAAACTAATCTTTT GGGATACCTTGTCAGAGGTGCTGCAAACGCGACACGCACGTGTTGGGTCA CAACGGTCTTGTGCGATATATTTCTCCGTTCGGGCGCGAGTATGATCCAC TCAATGTGAGCATCGTGCGACAACGAGCGACAACGCACGCAATTCTTAAC AGTAAAAGTCAAGTATTGGCCAGTCGGTCCTTGCGCCAGTCGAGGCGCGA GGTCGGATTACACCTTTATAGACGGGATTTTTGGGTAGCGTAGTGGGCTG TTCGCTTTGCACGAACAAATAACGGGCTACAACGAATGCGTGCGTTTGGA GAGGGGCGTAGCGTCGACCGTAACTCTACCCCAAGCCCCAACCAGCGCCC AAATCGTCCCGGAATCGCCCGAACCGGTCTCTGTCGTGTTTTTGGTTTTA TATTTTTAGTTATTTTCCCAAAAACATGTGGATCACGTGTATAGCACGTG TATACATGGCCATGTGTGGTAGCAGACGTCACAACAGGGTGGGACGGTCG TGAAATGGCCAATCAGAAATGATGAAACAACCTACTGAAGATCGCGTCTA CAAAAGGGCAATCCTTACCGAGATGCCCCTGTTTCGTTGTTTTCTCTTAA CATGTCTTGTGTTTTATGGATTTTTTCGCAGCCTTAACAATAAACTTAAC AACTACCGTATATTCATAGACTAGAGCTATAACAATACTATCTCAGCGAC GGAAACATAAAAAATGTATGGTGTCCGCTTCTATCAACACGGTGGGTGTC CCAACCTCTACAAACTATGGACCAAGCTGGGGGTTAAGACGAACTATTTT TCCTGCGCCTGGGTCCAATAACGCGTCACCGCCTTCGGGACCGCTGCGTA ACGGTGCTAAACGCGATTGGCCAAGACTTGGCGGTCGGTCTTTCACGCCC CCCATTCGAGACTTACGCACGCGCCCAAGCCTATCCTCGAGGCGCCCCGC TTCCGCGGCGGTCTCG
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig10511:575..4490+

>mRNA_D-dudresnayi_contig10511.560.1 ID=mRNA_D-dudresnayi_contig10511.560.1|Name=mRNA_D-dudresnayi_contig10511.560.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1074bp|location=Sequence derived from alignment at D-dudresnayi_contig10511:575..4490+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGGTGCCGTGGCATCTTGCGGGCTGCAGCTTTACAATTTCGGGCAGAC
GGTGTCCATCCCTCTGTGGAATGAAAAGTGGGAGCCGGACAGCTTCCACG
AGAAAATCAGGGTCAACAAGGCGATGGGTGCCGTGGCATCTTGCGGGCTG
CAGCTTTACAATTTCGGGCAGACGGTGTCCATCCCTCTGTGGAATGAAAA
GTGGGAGCCGGACAGCTTCCACGAGAAAATCAGGGTCAACAAGGCGAACG
GCATGCACACCTTGTGCTTGTTGGACATCAAAGTCAAGGAGCCAGACTTC
GAGAAGATGGCCAGGGGAAAGATCGCGTACCTGCCACCACGGTACATGAC
GAACGGCATGCACACCTTGTGCTTGTTGGACATCAAAGTCAAGGAGCCAG
ACTTCGAGAAGATGGCCAGGGGAAAGATCGCGTACCTGCCACCACGGTAC
ATGACGGTGGGCACGGCATTAGAACAGCTGCTGGAGGTAGAAGCGAGGAA
AGGTGAAGGGGTGTACGGGCCGGACTCGTTGTGCGTGGGGCTCGCTAGAC
TGGGGCAACCGACACAAACAATCGCGGCGGGAACAATGAGGTGGGCACGG
CATTAGAACAGCTGCTGGAGGTAGAAGCGAGGAAAGGTGAAGGGGTGTAC
GGGCCGGACTCGTTGTGCGTGGGGCTCGCTAGACTGGGGCAACCGACACA
AACAATCGCGGCGGGAACAATGAGCGAGTTGCTAGAGGTGGATTTTGGCG
GTCCCTTGCATTGCCTCGTCATATGCGGCACGACTCATCCTTTGGAAGAC
GAACTGCTCAAGTGGCACAGGGCGGACCATCAGCCGCCGGCGGAGGGGGT
GCCTACAGAAGTAGAAATAGAGAGCGCCAAGGAAGAAACGCCTCGGTGAC
GAGTTGCTAGAGGTGGATTTTGGCGGTCCCTTGCATTGCCTCGTCATATG
CGGCACGACTCATCCTTTGGAAGACGAACTGCTCAAGTGGCACAGGGCGG
ACCATCAGCCGCCGGCGGAGGGGGTGCCTACAGAAGTAGAAATAGAGAGC
GCCAAGGAAGAAACGCCTCGGTGA
back to top