mRNA_D-dudresnayi_contig1051.557.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig1051.557.1
Unique NamemRNA_D-dudresnayi_contig1051.557.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig1051.557.1 vs. uniprot
Match: D8LD99_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD99_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 4.060e-69
Identity = 181/439 (41.23%), Postives = 207/439 (47.15%), Query Frame = 2
Query:   38 MNVTEELSALDRELSMFPVRAFNFKNAGTVVIEQDVADVGSIVWDAEVLLAHYLDLAYGFRLRGVRVLELGAGTGLAGIVAVRLGASVVLTDQSKLLPTLIKNARANAPKLELLTPPENRLDVVTVGKKCFGDTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASAESTLVAELPPAVTAGSSNNNKTTRRDGEHEDIDASGRDTRRRV-------------------------DDRN----NCCRQAGS----WRVAVLLFSDREADLRGFVDAVVGGGR--GCRRPESDGGVVEHPRTGSFDLVFAADVVYLTNLWNALAFTIKTLLKPTGDALMTFEQRRGNVDSFFGPPRFGD----ACDGNGTNGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEVDM--GQDAGEGLRKAAATAQVRMFRMRR 1231
            M + +ELS L+RELSMFP RAF F  AG VVIEQDVADVGSIVWDAE+LLAHYLD AYG RL G+RVLELGAGTGLAG+              SKLLPTLI NARANA  LE    P       T G +    T                               P  +++T      P++              G+ ED+    +  RRR                          DDR      CC   G     WRV  LLFS+ E  L  +     GGG   G  R   +G        G FDLV AADVVYL +LW+A+AFTIK L KP+G+ALMTFEQRRGNVD FFGPPRFG      C G+G                                      EEVD   G DAGE LR AA  A+VRM+RMRR
Sbjct:    1 MAIEDELSGLNRELSMFPERAFEFSKAGEVVIEQDVADVGSIVWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGL--------------SKLLPTLIANARANAQDLEYSRQPPT-----TPGSRDGTST-------------------LPCDEPADVLSTPPESDNTCSVTTTPSIAKDG----------GKAEDVPVCRKSARRRKGGDDEGLNQVDAPKDSTVNVAASKPDDRELSTTMCCLDGGGIKGCWRVVELLFSESEEKLLRWRRMADGGGTTGGPLRAVPEGDPEGDSHDGLFDLVVAADVVYLNDLWDAMAFTIKALTKPSGEALMTFEQRRGNVDGFFGPPRFGGEETGCCWGHG--------------------------------------EEVDFAEGVDAGEVLRDAAKAARVRMYRMRR 353          
BLAST of mRNA_D-dudresnayi_contig1051.557.1 vs. uniprot
Match: A0A836CAM0_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAM0_9STRA)

HSP 1 Score: 137 bits (344), Expect = 2.840e-32
Identity = 73/109 (66.97%), Postives = 85/109 (77.98%), Query Frame = 2
Query:   32 AKMNVTEELSALDRELSMFPVRAFNFKNAGTVVIEQDVADVGSIVWDAEVLLAHYLDLAYGFRLRGVRVLELGAGTGLAGIVAVRLGASVVLTDQSKLLPTLIKNARAN 358
            A ++   ELSA D +L+ FP RAF F +AGTV+I+QD  DVGSIVWDAEV+LAH+LD      LRG+ VLELGAGTGLAGIVA RLGA VVLTDQ+KLLP L +NA AN
Sbjct:   23 ALLSYAIELSANDHDLARFPQRAFEFTHAGTVLIDQDFGDVGSIVWDAEVVLAHHLDATVSKSLRGMSVLELGAGTGLAGIVAARLGAHVVLTDQAKLLPQLQRNADAN 131          
BLAST of mRNA_D-dudresnayi_contig1051.557.1 vs. uniprot
Match: A0A1V9YJ95_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJ95_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.420e-19
Identity = 52/101 (51.49%), Postives = 64/101 (63.37%), Query Frame = 2
Query:   38 MNVTEELSALDRELSMFPVRAFNFKNAGTVVIEQDVADVGSIVWDAEVLLAHYLDLAYGFRLRGVRVLELGAGTGLAGIVAVRLGASVVLTDQSKLLPTLI 340
            M    ELS +DR L+    R F +  AG V I+QD+A VG  VWDA V+L+HYLD      L+G R++ELGAGT L  IV+ RLGA VV TD S +LP  I
Sbjct:    1 MQALRELSTVDRSLTYAQTRRFVYAAAGVVTIDQDIAHVGGTVWDAGVVLSHYLDSLGSAALQGKRIIELGAGTALPSIVSARLGAVVVATDMSDVLPYTI 101          
BLAST of mRNA_D-dudresnayi_contig1051.557.1 vs. uniprot
Match: T0QEG4_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QEG4_SAPDV)

HSP 1 Score: 97.1 bits (240), Expect = 2.470e-19
Identity = 52/98 (53.06%), Postives = 64/98 (65.31%), Query Frame = 2
Query:   38 MNVTEELSALDRELSMFPVRAFNFKNAGTVVIEQDVADVGSIVWDAEVLLAHYLDLAYGFRLRGVRVLELGAGTGLAGIVAVRLGASVVLTDQSKLLP 331
            M    ELS LD  L+    R F+F  AG+VVI QD+A VG  VWDA V+L+HYLD      ++G R++ELGAGT L  I+A RLGA VV TD S +LP
Sbjct:    1 MPALHELSTLDPSLTYARERRFHFAAAGSVVILQDIAHVGGTVWDAGVVLSHYLDTLGSIAMKGKRLVELGAGTALPSIIAARLGADVVATDMSDVLP 98          
BLAST of mRNA_D-dudresnayi_contig1051.557.1 vs. uniprot
Match: A0A024U606_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U606_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.650e-17
Identity = 52/110 (47.27%), Postives = 66/110 (60.00%), Query Frame = 2
Query:   41 NVTEELSALDRELSMFPVRAFNFKNAGTVVIEQDVADVGSIVWDAEVLLAHYLDLAYGFRLRGVRVLELGAGTGLAGIVAVRLGASVVLTDQSKLLPTLIKNARANAPKL 370
            N+  ELS LDR L+    R F + NAG V I QD+ADVG  VWDA ++L+HYLD      L+G  ++ELGAGT +  IVA RLGA  V TD  ++L       R N  +L
Sbjct:    3 NIRSELSFLDRNLTYAKERGFVYPNAGRVTILQDIADVGGTVWDASIVLSHYLDSLGTTVLQGKSLVELGAGTAVPSIVASRLGARAVATDMKQVLLYTEMAIRGNCDQL 112          
BLAST of mRNA_D-dudresnayi_contig1051.557.1 vs. uniprot
Match: A0A1V9ZGK2_9STRA (Methyltransferase 21A-like isoform 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZGK2_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.070e-14
Identity = 47/102 (46.08%), Postives = 59/102 (57.84%), Query Frame = 2
Query:   53 ELSALDRELSMFPVRAFNFKNAGTVVIEQDVADVGSIVWDAEVLLAHYLDLAYGFRLRGVRVLELGAGTGLAGIVAVRLGASVVLTDQSKLLPTLIKNARAN 358
            ELS++ REL+    R FNF  AG V I QD+  V   VWDA ++L+HYLD      L G  +LE+GAGT L  IV  RLGA V+ TD  + L    +   AN
Sbjct:    2 ELSSIKRELTYAKERHFNFAIAGYVKIIQDITQVSGTVWDASIVLSHYLDSLGTITLEGKTILEIGAGTALPSIVGARLGAIVIATDLIEALEYTNRAIEAN 103          
BLAST of mRNA_D-dudresnayi_contig1051.557.1 vs. uniprot
Match: A0A485KZD0_9STRA (Aste57867_13708 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZD0_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 3.150e-14
Identity = 44/92 (47.83%), Postives = 58/92 (63.04%), Query Frame = 2
Query:   53 ELSALDRELSMFPVRAFNFKNAGTVVIEQDVADVGSIVWDAEVLLAHYLDLAYGFRLRGVRVLELGAGTGLAGIVAVRLGASVVLTDQSKLL 328
            ELS +DR+L+    R FNF++ G V I QD++ VG  +WDA V+L+HYLD      L G  ++E+GAGT L  IV  RLG  VV TD   +L
Sbjct:    8 ELSYVDRDLTYAKERHFNFEHGGHVSILQDISHVGGTIWDASVVLSHYLDSLGPATLSGKSMVEIGAGTALPSIVGARLGMDVVATDMQDVL 99          
BLAST of mRNA_D-dudresnayi_contig1051.557.1 vs. uniprot
Match: MT21A_MOUSE (Protein N-lysine methyltransferase METTL21A n=4 Tax=Boreoeutheria TaxID=1437010 RepID=MT21A_MOUSE)

HSP 1 Score: 74.7 bits (182), Expect = 1.230e-11
Identity = 47/107 (43.93%), Postives = 63/107 (58.88%), Query Frame = 2
Query:   50 EELSALDRELSMFPVRAFNFKNAGTVVIEQDVADVG--SIVWDAEVLLAHYLDLAYGFRLRGVRVLELGAGTGLAGIVAVRLGASVVLTDQSKLLPTLIKNARANAP 364
            EE +A+  +    P+  F+F N  T+ I QD   +G  ++VWDA V+L+ YL++     LRG   +ELGAGTGL GIVA  LGA V +TD+   L  L  N  AN P
Sbjct:    7 EESAAIGLQKFHKPLATFSFANH-TIQIRQDWRQLGVAAVVWDAAVVLSMYLEMG-AVELRGCSAVELGAGTGLVGIVAALLGAQVTITDRKVALEFLKSNVEANLP 111          
BLAST of mRNA_D-dudresnayi_contig1051.557.1 vs. uniprot
Match: UPI001E1E1615 (protein N-lysine methyltransferase METTL21A n=1 Tax=Echinops telfairi TaxID=9371 RepID=UPI001E1E1615)

HSP 1 Score: 74.3 bits (181), Expect = 1.800e-11
Identity = 45/94 (47.87%), Postives = 59/94 (62.77%), Query Frame = 2
Query:   89 PVRAFNFKNAGTVVIEQDVADVG--SIVWDAEVLLAHYLDLAYGFRLRGVRVLELGAGTGLAGIVAVRLGASVVLTDQSKLLPTLIKNARANAP 364
            P+  F+F N+ T+ I QD   +G  ++VWDA V+L+ YL+L     LRG   +ELGAGTGL GIVA  LGA V +TD+   L  L  N +AN P
Sbjct:   24 PLATFSFANS-TIQIRQDWRQLGVAAVVWDAAVVLSTYLELG-AVELRGCSAVELGAGTGLVGIVASLLGAHVTITDRKAALEFLKSNVQANLP 115          
BLAST of mRNA_D-dudresnayi_contig1051.557.1 vs. uniprot
Match: A0A7S2SQV4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQV4_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.880e-11
Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 2
Query:  164 VWDAEVLLAHYLDLAYGFRLRGVRVLELGAGTGLAGIVAVRLGASVVLTDQSKLLPTLIKNARAN 358
            VWDAE +L H+L   YG  L+G RVLELGAGTGL+GIVA RLGA V LT+  + +P L +N   N
Sbjct:    6 VWDAETILTHHLVEEYGMALQGCRVLELGAGTGLSGIVAARLGADVTLTEVEEAVPLLERNRTRN 70          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1051.557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD99_ECTSI4.060e-6941.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAM0_9STRA2.840e-3266.97Putative methyltransferase-domain-containing prote... [more]
A0A1V9YJ95_9STRA2.420e-1951.49Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
T0QEG4_SAPDV2.470e-1953.06Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A024U606_9STRA1.650e-1747.27Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A1V9ZGK2_9STRA2.070e-1446.08Methyltransferase 21A-like isoform 1 n=1 Tax=Thrau... [more]
A0A485KZD0_9STRA3.150e-1447.83Aste57867_13708 protein n=1 Tax=Aphanomyces stella... [more]
MT21A_MOUSE1.230e-1143.93Protein N-lysine methyltransferase METTL21A n=4 Ta... [more]
UPI001E1E16151.800e-1147.87protein N-lysine methyltransferase METTL21A n=1 Ta... [more]
A0A7S2SQV4_9STRA1.880e-1158.46Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig1051contigD-dudresnayi_contig1051:15236..21092 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score95.9
Seed ortholog evalue4.6e-17
Seed eggNOG ortholog112098.XP_008610405.1
KEGG koko:K21804
EggNOG free text desc.lysine N-methyltransferase activity
EggNOG OGsKOG2793@1,KOG2793@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03110
Hectar predicted targeting categoryother localisation
Exons4
Model size1538
Cds size1212
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig1051.557.1prot_D-dudresnayi_contig1051.557.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig1051 15273..20803 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927553.1763148-UTR-D-dudresnayi_contig1051:15235..152721622927553.1763148-UTR-D-dudresnayi_contig1051:15235..15272Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1051 15236..15272 +
1690556804.4549341-UTR-D-dudresnayi_contig1051:15235..152721690556804.4549341-UTR-D-dudresnayi_contig1051:15235..15272Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1051 15236..15272 +
1622927553.240629-UTR-D-dudresnayi_contig1051:20803..210921622927553.240629-UTR-D-dudresnayi_contig1051:20803..21092Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1051 20804..21092 +
1690556804.530837-UTR-D-dudresnayi_contig1051:20803..210921690556804.530837-UTR-D-dudresnayi_contig1051:20803..21092Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1051 20804..21092 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927553.1897528-CDS-D-dudresnayi_contig1051:15272..153741622927553.1897528-CDS-D-dudresnayi_contig1051:15272..15374Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1051 15273..15374 +
1690556804.4659514-CDS-D-dudresnayi_contig1051:15272..153741690556804.4659514-CDS-D-dudresnayi_contig1051:15272..15374Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1051 15273..15374 +
1622927553.2006261-CDS-D-dudresnayi_contig1051:16818..169531622927553.2006261-CDS-D-dudresnayi_contig1051:16818..16953Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1051 16819..16953 +
1690556804.4759817-CDS-D-dudresnayi_contig1051:16818..169531690556804.4759817-CDS-D-dudresnayi_contig1051:16818..16953Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1051 16819..16953 +
1622927553.2139392-CDS-D-dudresnayi_contig1051:17272..179171622927553.2139392-CDS-D-dudresnayi_contig1051:17272..17917Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1051 17273..17917 +
1690556804.4930937-CDS-D-dudresnayi_contig1051:17272..179171690556804.4930937-CDS-D-dudresnayi_contig1051:17272..17917Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1051 17273..17917 +
1622927553.2262416-CDS-D-dudresnayi_contig1051:20473..208031622927553.2262416-CDS-D-dudresnayi_contig1051:20473..20803Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1051 20474..20803 +
1690556804.5033326-CDS-D-dudresnayi_contig1051:20473..208031690556804.5033326-CDS-D-dudresnayi_contig1051:20473..20803Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1051 20474..20803 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig1051.557.1

>prot_D-dudresnayi_contig1051.557.1 ID=prot_D-dudresnayi_contig1051.557.1|Name=mRNA_D-dudresnayi_contig1051.557.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=404bp
MNVTEELSALDRELSMFPVRAFNFKNAGTVVIEQDVADVGSIVWDAEVLL
AHYLDLAYGFRLRGVRVLELGAGTGLAGIVAVRLGASVVLTDQSKLLPTL
IKNARANAPKLELLTPPENRLDVVTVGKKCFGDTDADADVDADADADADA
DADADADTDADADAAPASAESTLVAELPPAVTAGSSNNNKTTRRDGEHED
IDASGRDTRRRVDDRNNCCRQAGSWRVAVLLFSDREADLRGFVDAVVGGG
RGCRRPESDGGVVEHPRTGSFDLVFAADVVYLTNLWNALAFTIKTLLKPT
GDALMTFEQRRGNVDSFFGPPRFGDACDGNGTNGDGNGDGNVLNGEGIGN
GIGDGYGIGNGDGNGWERGEEVDMGQDAGEGLRKAAATAQVRMFRMRRGV
RRL*
back to top

mRNA from alignment at D-dudresnayi_contig1051:15236..21092+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig1051.557.1 ID=mRNA_D-dudresnayi_contig1051.557.1|Name=mRNA_D-dudresnayi_contig1051.557.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=5857bp|location=Sequence derived from alignment at D-dudresnayi_contig1051:15236..21092+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATTCAGCCTGTCACTTACTCCTTTGGTGCTTGCCAAAATGAACGTCACGG AGGAGCTCTCAGCGTTAGATCGCGAGCTGTCCATGTTCCCTGTCCGAGCT TTTAATTTCAAGAACGCGGGAACTGTGGTAATCGAGCAGGTGATCACTGC TACCAGAACATGTTGCACACGTTTCATTACTCGTACAGCTCTGTTCTTTA CCAGATCTAACTGTTGGTGGTTGTTGAAAACAACAGCACCTAAGGCAAGG TAGTAGATCGTATCATATAGCAGCTGTTGTTGCTGTTCTCATTGGCTCAT TAGTCGCCATGTTCTAGCCCGTGGTCGCAAGACAGGGTCAACGTTCTGGA AGAAAAGCAGGAAAATAAAATCCATCGCTCGAAAAGCAGACAAAAATACT TTGTGCGAGTACACCTACATTAATATACCAGGTACACAACGACTGTACGC GAGTACGAGTAGACAACAGACTTATAATCTAACCCGGCAAGCACATCGGC CGAGAGTGCACGATGTTAAGGTCCACCCCCAACCCCCGCCTCCAGCCAAG GCGGGCTCTGACCATAACTTTGCATACGCGAAGGTTGAACTCCGCAGCCG CTTCGCCCCCAACAGGCCTGTGCGAAAGACGACAAAATACAGACCGTTTG ACAGACATCTCTGTTGAGGTCCGACGTCGACCGTCGCGGGCGTGTCATCG AGAGGATCAACTCTGACCTCACCGAGCGACCAGATCTGTTCTCCAACGTC TCTGAGCGGGTCGAGGCGTTCACCAACATCGTCCTAGAGGCAACAGAGGC AGATATTCAAACGCCGCCATGACGCCACCACGCGCGGGGATGGTGTAAGA CTGCAGAAACATTGGCCGCCGTCGCTCAGGCGTGGAAAGAGAGAGAGGAG GCCCGAAATGGCATGCGGGGCAACCCCAAAGATAGGGTAGCGTAGAAGAG ACTTCGGAACGCATGTGCGAAACTGCGAGGGGTGAAAGGTGTAGGGCTGT ATGTCCACTTTGAAGACTACGTCGCCGAACTTGAAGAATGCCTCGAGCGC AGATGGCACCGACAGAAGGACATAACAAGCAGAACAAGAAAGGACGGAAC CCAAACAAGAAAGGAAAAAGGAAGAGAACTACCGCGTTGCCCCCCCCCCT TTCCAGTTCCTGCTACTTAGGGCGTTTTTAACCTCTTTCGCGTGGCCTGC ACTACCCCCTGCCGCTTCCTCTCTGTGCCACGTCTCCATAAAAGTTTCAG CCCCCTCTAGGACCCCCTTATACCACATTCCCCGCTCGATGGCAGCTGTA GTCCATAGGGCGGTCTCTACTCCAAAAATTCATTGAGGCTTCTCTATTGA TTCCACGGCGGTGACGCGGTGAGGTCATTCAATATAAATTGCGCGCAGGT CTTGGCCGGCCTACCTCGTCCCGGGTTCTGCTAACCAGTGTCTCGGACAT CACCCGCTTAGGTAGCCGCCCACCGCGCTTTCTATCGACGGCCCCCGCGA AAAATGTACGGAGTATACTTCGAAGTATGTTAATTTGAGCAAAACGTAAC GAAAACGGCGCCCTTCCTTTCCCGTGCGCGCAGGACGTGGCCGATGTGGG ATCTATCGTGTGGGATGCAGAGGTGCTGCTGGCGCACTACCTTGATCTGG CGTACGGTTTTCGATTGCGCGGAGTGCGAGTACTGGAGCTTGGCGCGGGT ACTGGACTCGCTGGCATCGTGCGTGGACGGACATACATACAATGTCTCTC TCTGACACACCTCGCAAACGGCAAAAAAAAAAGAGCCGCAGAAGTTTGTG GAGAATTGTGTCCAGCACAAAGTCTAGGAGGAGGGTGTTAGCGAGCGATG TAAACCTCCATCATACTAGAGTCATGCCTGGCATGCATGTATGTCCTACA ATAGAACAGCATTATTGCACGCAGTCATTGTACCTTATCGCTTGACGCAC GCCCCACACCGCCCCGACCCGCCCCCGCCTTCACTGCTGGATGCCGTACC CCCTGTGGTAACGCCAAAAACAATATACAAAACTCAGGTAGCGGTGAGAC TTGGTGCCTCCGTCGTTCTTACGGACCAGTCGAAACTGTTGCCCACGCTC ATCAAGAACGCTCGAGCCAACGCGCCGAAGCTCGAGCTTCTCACGCCGCC CGAGAATCGTCTCGACGTTGTTACCGTCGGGAAGAAATGTTTCGGGGACA CGGACGCAGACGCTGACGTTGACGCTGACGCTGACGCTGACGCTGACGCT GACGCTGACGCTGACGCTGACACTGACGCTGACGCTGACGCTGCCCCCGC CTCTGCAGAATCGACTCTCGTGGCGGAACTCCCTCCTGCTGTGACGGCCG GCAGCAGCAATAACAACAAAACGACGCGTCGAGACGGCGAACATGAAGAC ATCGACGCTTCAGGGCGAGACACTCGCCGCCGTGTCGATGATAGGAATAA TTGTTGCCGCCAGGCAGGGAGTTGGCGAGTAGCGGTGCTGTTGTTTTCTG ACAGGGAGGCGGACTTGAGGGGCTTTGTGGATGCGGTGGTGGGGGGGGGG AGGGGTTGCCGCCGACCTGAAAGCGACGGCGGGGTGGTGGAGCATCCGCG AACGGGGTCGTTTGATCTAGTTTTCGCTGCCGATGTTGTCTACCTGACCA ATCTTTGGAACGCCTTGGCCTTCACGATAAAGGTGCGGCGGGACTGGTTC GTTTTGTTGTTTTTGCGGCCATGCTCTATATAGCAGGTTGTGACCACAGA TTTTGGAACTCCCTTAGGATAGGAAGAAACTGTTAGACTCTTGAGTACGC TGGTGGATGTCGCAGAGTAGAAAGGACGATTCTTATTTTTTTCAACCATT GTTATCCTCCGGCGGATGGGTAAAAATGAAGCTTGATCTTCATAAACTTC CACGATATTTCTTTATTAATTTTTTTTTGATGATTCTCCTGTTGTTTTTA CAGCTTTTTTGCCGCTTTATATTGCCGAATATCACTCTTGTTGTAGAACA CAACGTTGCGTTTTTTCAGCGCGAGAGCCTTTGAGGCCATAGGCCGTGAA GATAGCCGCCCGGAGGGACAACGTTGAACGTCGCCCCCCACGGCTAGTGC AGGATTTGCCGAAGCTCACCCACCAACAAAAACCCAGGCTAATACGCCTT GCCCCCCGGACTCGGTCCAGTTGGTGTCCACCCTACCCGCGCCGGTGTTG GTCCTCGCGTTGTTAGTGTGAAGACAACAACAGCAGCGTGTGATCTCGCC CTTCTGTCTGTCAAGGAGCCCGATCTTATGCTCTCGGCTGCAAAGCTGCT AACATAGGAGACGCGTCACAACCCCCTCGGTACGGGCTTTCTTGGCGTTA TTTTGTACCAGGTACTAGATTTAGTTGTAGTATGTGGCTTCTTCCTTATT GGATGGCAGTCCGTCAAGGGGGTGACACTGCCGTCCGCTTAATTTGCATA TTTGCTCGTCTGTGACTGTTGAATTTAGTCAATTAGGGTTACCATATAAT AGCTCAGGGTTAGCCCCAGCCTCGATCTAACCCCCCCCCCCCCTTTATAG TAGTACAGTAGTAACAGTATAGTAGTAGAGTTGTTGTTCAACAGTAGTAG TAGTAGTAGTAGTAGTAGTAGTATGATAGTAGTAGTAGCTCTGTAGTAGT GCAGTAGTACTACAACAAAAACAATGACGCAGGAATGCTCGGGGGGGATC GATCTCGCGAAATCGAGCTAAGAAGTTTAAGAGACTAACCACTAGACCAC CGGGGTAACGAAAATATTACTATTGTTGATGGCGCTGCTTGACATACACT CCATACGTAACATGATATTGTTATCTTCTGCCTGCACCAGCATGGACGGC AACCCCTTGCTACGAAAAAAACAGCAACCGCATACTGTGCCACAGGCATG CGCGTGTTGCGGTATCAATAGCGAAAGTGTACGAGTAGATACACGACGTA TGGCGTAATCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCACCCCAGCCGGGGACAAACAAAAAAAAAAAATAGACAAACGAAATCG AAAAAAAAAAAAAAAGCGCCAGANNNNNNNNNNGCGGGGTTTGGGGTCTC AAAACACAAAAGTTACGAAAAAAACACACCCATGTGGCCAAACCCCCCCC CCCCCCCCCCCCCCTGCCGCCCCTCATACCGTGACAGGAAGTGGGTAAGA AAAGCAAAACGTTTATATGCAAGATTTTGCAAAAACGTAGAAGAGCGCTC AAATGTTGGAGGTGTCTCTATTATGAGTAAGAATGGTGCTTCCTTCTCGA AAGGGGTGCGTGGTCAACGGTACAATTACTAAGGCAAGCAACAAATGAGT ACCCCCTCCCCCTTATACCGTAAACTTCATCAACCTGTAGGGTTCCAGTT TTATCTACCAGGGTGACTAATATCTAATACCCTATCCCTGTCGCGCCCGA TACTCCAGTGAGGGCCCCAGGGCGAGAGCCGACGTACTCGCGCTGTCGCA ACGGCAGCAATGTTGTGTGTCCTCCTGCGACAGAGTTAATTTGGCACAAA CTATACAACTTGTTGTCTGTGTGGGATTATTGATGTGATGAGTTTTTTAA GCGTTATTTTCTCCCATCCGCCGGAGGATGATTACGAGCGAAGCGAGATT ATAATTTCCGATGCCGCCAAAATTATAGGGTGCCCTATATCAATTCGCGT GCCCGAATCTCCGTGTCCGACCCGACAACCGGAAATCTCCCAAAGAGAAC AATCCGCGGAACGGTCGAACCTTCTTTTTTTTTGTTCCCACCAACGCACA TAGTTGACGATAGTTACAGACAAATATCCTCTGACGCGGGTTTTTCCTAG CGACAGCTACGCGTAATTCGTTTTTTTTATCGGGGAATCCAACATAATAC CGTTGTGCGTCACGACATATATATGGCGTCAAAGTGTGAGTCACAGTACC GTATTAGTAAACGGATAGAGCGCCTATGGCGTTACCTCGAGCACGCGTGC GCGCGCGAGAGAGTTCTGCGTGATATCCTGGCGAAAGTGAAGAGTTGTAC AAGCGACGCCCGCGTACATATATGTATGCGTGCATGTGTGCACCTCATCG CTTTTGAAAACAACACAGTAGTAGTAATTTCAAGCGAACTTGCTTTCAAC TTCTTTTTTGTTTACAAACCAACCGATCGGCTTGCGATTGACTGGCTTTT GACTCCTTGCGTCGTGGACGTACGTGTGTGTGTCACAGACGCTTTTGAAA CCAACCGGTGACGCACTGATGACGTTCGAGCAGCGACGCGGCAACGTGGA CTCCTTTTTCGGCCCCCCAAGATTCGGCGACGCCTGCGATGGTAACGGTA CTAATGGTGACGGTAACGGTGACGGTAACGTCTTAAACGGTGAAGGTATC GGTAACGGTATCGGTGACGGTTACGGTATCGGAAATGGTGACGGTAACGG TTGGGAACGGGGGGAGGAAGTTGACATGGGACAAGACGCCGGGGAGGGGC TACGCAAAGCCGCCGCGACGGCTCAGGTTCGCATGTTTCGCATGAGGCGG GGGGTGCGCAGGTTGTGACAACAGTAGTAGTAGTAGAATCACATGTAGTA AAGTCAGGAGTTATTCTAGATCTCTTTAGGGTTTAGTTCTCTATTTTGAC TACTCAAATTTTGACCGCGTTTTGTTTACCGCTGTTTTTCACACATGTGG TCTCAGTAGTGACACTGCCGAAATTTAACGTTCTTGCGTCAGTTGATGCA GAGCAAGTGGCCCCCATATAGCTATAGTCGGCACACAGACCTACCGCCTG CACCTATTGCCGTCTTCTGGGGTTCCTTGTGGCCTGCTCGCCAAGATTGG ACTAAAC
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig1051:15236..21092+

>mRNA_D-dudresnayi_contig1051.557.1 ID=mRNA_D-dudresnayi_contig1051.557.1|Name=mRNA_D-dudresnayi_contig1051.557.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2424bp|location=Sequence derived from alignment at D-dudresnayi_contig1051:15236..21092+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGAACGTCACGGAGGAGCTCTCAGCGTTAGATCGCGAGCTGTCCATGTT
CCCTGTCCGAGCTTTTAATTTCAAGAACGCGGGAACTGTGGTAATCGAGC
AGATGAACGTCACGGAGGAGCTCTCAGCGTTAGATCGCGAGCTGTCCATG
TTCCCTGTCCGAGCTTTTAATTTCAAGAACGCGGGAACTGTGGTAATCGA
GCAGGACGTGGCCGATGTGGGATCTATCGTGTGGGATGCAGAGGTGCTGC
TGGCGCACTACCTTGATCTGGCGTACGGTTTTCGATTGCGCGGAGTGCGA
GTACTGGAGCTTGGCGCGGGTACTGGACTCGCTGGCATCGACGTGGCCGA
TGTGGGATCTATCGTGTGGGATGCAGAGGTGCTGCTGGCGCACTACCTTG
ATCTGGCGTACGGTTTTCGATTGCGCGGAGTGCGAGTACTGGAGCTTGGC
GCGGGTACTGGACTCGCTGGCATCGTAGCGGTGAGACTTGGTGCCTCCGT
CGTTCTTACGGACCAGTCGAAACTGTTGCCCACGCTCATCAAGAACGCTC
GAGCCAACGCGCCGAAGCTCGAGCTTCTCACGCCGCCCGAGAATCGTCTC
GACGTTGTTACCGTCGGGAAGAAATGTTTCGGGGACACGGACGCAGACGC
TGACGTTGACGCTGACGCTGACGCTGACGCTGACGCTGACGCTGACGCTG
ACGCTGACACTGACGCTGACGCTGACGCTGCCCCCGCCTCTGCAGAATCG
ACTCTCGTGGCGGAACTCCCTCCTGCTGTGACGGCCGGCAGCAGCAATAA
CAACAAAACGACGCGTCGAGACGGCGAACATGAAGACATCGACGCTTCAG
GGCGAGACACTCGCCGCCGTGTCGATGATAGGAATAATTGTTGCCGCCAG
GCAGGGAGTTGGCGAGTAGCGGTGCTGTTGTTTTCTGACAGGGAGGCGGA
CTTGAGGGGCTTTGTGGATGCGGTGGTGGGGGGGGGGAGGGGTTGCCGCC
GACCTGAAAGCGACGGCGGGGTGGTGGAGCATCCGCGAACGGGGTCGTTT
GATCTAGTTTTCGCTGCCGATGTTGTCTACCTGACCAATCTTTGGAACGC
CTTGGCCTTCACGATAAAGGTAGCGGTGAGACTTGGTGCCTCCGTCGTTC
TTACGGACCAGTCGAAACTGTTGCCCACGCTCATCAAGAACGCTCGAGCC
AACGCGCCGAAGCTCGAGCTTCTCACGCCGCCCGAGAATCGTCTCGACGT
TGTTACCGTCGGGAAGAAATGTTTCGGGGACACGGACGCAGACGCTGACG
TTGACGCTGACGCTGACGCTGACGCTGACGCTGACGCTGACGCTGACGCT
GACACTGACGCTGACGCTGACGCTGCCCCCGCCTCTGCAGAATCGACTCT
CGTGGCGGAACTCCCTCCTGCTGTGACGGCCGGCAGCAGCAATAACAACA
AAACGACGCGTCGAGACGGCGAACATGAAGACATCGACGCTTCAGGGCGA
GACACTCGCCGCCGTGTCGATGATAGGAATAATTGTTGCCGCCAGGCAGG
GAGTTGGCGAGTAGCGGTGCTGTTGTTTTCTGACAGGGAGGCGGACTTGA
GGGGCTTTGTGGATGCGGTGGTGGGGGGGGGGAGGGGTTGCCGCCGACCT
GAAAGCGACGGCGGGGTGGTGGAGCATCCGCGAACGGGGTCGTTTGATCT
AGTTTTCGCTGCCGATGTTGTCTACCTGACCAATCTTTGGAACGCCTTGG
CCTTCACGATAAAGACGCTTTTGAAACCAACCGGTGACGCACTGATGACG
TTCGAGCAGCGACGCGGCAACGTGGACTCCTTTTTCGGCCCCCCAAGATT
CGGCGACGCCTGCGATGGTAACGGTACTAATGGTGACGGTAACGGTGACG
GTAACGTCTTAAACGGTGAAGGTATCGGTAACGGTATCGGTGACGGTTAC
GGTATCGGAAATGGTGACGGTAACGGTTGGGAACGGGGGGAGGAAGTTGA
CATGGGACAAGACGCCGGGGAGGGGCTACGCAAAGCCGCCGCGACGGCTC
AGGTTCGCATGTTTCGCATGAGGCGGGGGGTGCGCAGGTTGTGAACGCTT
TTGAAACCAACCGGTGACGCACTGATGACGTTCGAGCAGCGACGCGGCAA
CGTGGACTCCTTTTTCGGCCCCCCAAGATTCGGCGACGCCTGCGATGGTA
ACGGTACTAATGGTGACGGTAACGGTGACGGTAACGTCTTAAACGGTGAA
GGTATCGGTAACGGTATCGGTGACGGTTACGGTATCGGAAATGGTGACGG
TAACGGTTGGGAACGGGGGGAGGAAGTTGACATGGGACAAGACGCCGGGG
AGGGGCTACGCAAAGCCGCCGCGACGGCTCAGGTTCGCATGTTTCGCATG
AGGCGGGGGGTGCGCAGGTTGTGA
back to top