mRNA_D-dudresnayi_contig10503.553.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10503.553.1
Unique NamemRNA_D-dudresnayi_contig10503.553.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig10503.553.1 vs. uniprot
Match: D7FYP9_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP9_ECTSI)

HSP 1 Score: 653 bits (1684), Expect = 4.470e-226
Identity = 333/350 (95.14%), Postives = 343/350 (98.00%), Query Frame = 1 
Query:  430 DDDKKSFESLGVTGPLCEAMNQLGWTHATEIQRQALPLAFAGRDVIGLAETGSGKTGAFAIPILQALLKNPQRLFAVVMAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALALKPHVVIATPGRLVDHLENTKGFSLRTVKFLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLRDPIRVEVAHKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGERNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQ 1479
            +D K SFESLGVTGPLCEA  QLGWTHATEIQRQALPLAF G+DVIGLAETGSGKTGAFA+PILQALL+NPQRLFAV+MAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALALKPHVVIATPGRLVDHLENTKGFSLRT K+LVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASL++P RVEVA+KFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSG+RNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQ
Sbjct:  402 EDIKASFESLGVTGPLCEAAAQLGWTHATEIQRQALPLAFEGKDVIGLAETGSGKTGAFALPILQALLENPQRLFAVIMAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLKNPARVEVANKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQ 751
[Close]
BLAST of mRNA_D-dudresnayi_contig10503.553.1 vs. uniprot
Match: W7TSS5_9STRA (Dead deah box rna n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSS5_9STRA)

HSP 1 Score: 548 bits (1413), Expect = 3.280e-190
Identity = 271/352 (76.99%), Postives = 312/352 (88.64%), Query Frame = 1 
Query:  430 DDDKKSFESLGVTGPLCEAMNQLGWTHATEIQRQALPLAFAGRDVIGLAETGSGKTGAFAIPILQALLKNPQRLFAVVMAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALALKPHVVIATPGRLVDHLENTKGFSLRTVKFLVLDEADRMLGMDFEEEINKVLSVLP--RERRTFLFSATMTSKVAKLQRASLRDPIRVEVAHKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGERNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQ 1479
            +DD ++FE+LGV  PLCEA   +GWT  T IQ+QA+P A  GRDVIGLAETGSGKTGAFA+P+LQALL  PQRLFAVV+APTRELAFQI+EV EALG  IGLK+ C+VGG+DM  Q++ALA KPHVV+ATPGRLVDHLENTKGF +R  +FLVLDEADRML MDFEEEINK+L+++P  + RRT LFSATMTSKVAKLQRASL DP++VE + KF+TP+TLVQQYLFIPAK+KDCYLAY LNE AGQ+ +VFV+TCNNAQR+ALLLRNLGF A+CLHGQM QPKRLGAL KFKSG+R++LIATDVASRGLDIP+VDLV+N +IPSHGKDYIHRVGRTARAGRAGRSIA VTQ
Sbjct:   30 EDDVQTFEALGVVKPLCEACAAIGWTKPTGIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQRLFAVVLAPTRELAFQIHEVFEALGASIGLKSCCVVGGVDMMTQAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKVEASDKFTTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICLHGQMTQPKRLGALHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVTQ 381
[Close]
BLAST of mRNA_D-dudresnayi_contig10503.553.1 vs. uniprot
Match: A0A7S0SXP7_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXP7_9STRA)

HSP 1 Score: 545 bits (1405), Expect = 1.810e-189
Identity = 269/350 (76.86%), Postives = 309/350 (88.29%), Query Frame = 1 
Query:  430 DDDKKSFESLGVTGPLCEAMNQLGWTHATEIQRQALPLAFAGRDVIGLAETGSGKTGAFAIPILQALLKNPQRLFAVVMAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALALKPHVVIATPGRLVDHLENTKGFSLRTVKFLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLRDPIRVEVAHKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGERNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQ 1479
            D++ K+F+ LGV   LCEA+  +GW   T IQ  +LP A AGRD+IGLAETGSGKTGAFAIPILQALL NPQR FAVV+APTRELAFQI+EV EALG  I L++VCIVGGIDM  Q++ LA +PHV++ATPGRL DHL+NTKGFSLR +K+LVLDEADRML MDFEEEINK+L+V+PRER T+LFSATMTSKVAKLQ+ASL +P++VEV++KF TPKTL QQYLFIPAK KDCYL+Y+L+EF GQSTIVFV+TCNNA RVALLLRNLGF AVCLHGQM Q KRLGAL KFKSG+RN+L+ATDVASRGLDIP+VDLV N +IPSHGKDYIHRVGRTARAG+AGRSIAFVTQ
Sbjct:   15 DNENKTFKDLGVVDTLCEAIESVGWKFPTPIQLNSLPEALAGRDIIGLAETGSGKTGAFAIPILQALLANPQRFFAVVLAPTRELAFQIHEVFEALGSSIALQSVCIVGGIDMMTQAIVLAKRPHVIVATPGRLADHLQNTKGFSLRNLKYLVLDEADRMLSMDFEEEINKILAVIPRERNTYLFSATMTSKVAKLQKASLNNPVKVEVSNKFQTPKTLSQQYLFIPAKWKDCYLSYILDEFKGQSTIVFVATCNNALRVALLLRNLGFNAVCLHGQMNQAKRLGALNKFKSGQRNILVATDVASRGLDIPNVDLVCNYDIPSHGKDYIHRVGRTARAGKAGRSIAFVTQ 364
[Close]
BLAST of mRNA_D-dudresnayi_contig10503.553.1 vs. uniprot
Match: A0A812RT96_SYMMI (DDX47 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RT96_SYMMI)

HSP 1 Score: 544 bits (1401), Expect = 1.420e-188
Identity = 264/345 (76.52%), Postives = 311/345 (90.14%), Query Frame = 1 
Query:  445 SFESLGVTGPLCEAMNQLGWTHATEIQRQALPLAFAGRDVIGLAETGSGKTGAFAIPILQALLKNPQRLFAVVMAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALALKPHVVIATPGRLVDHLENTKGFSLRTVKFLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLRDPIRVEVAHKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGERNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQ 1479
            +F+SLGV   LC+A+N +GWT  TEIQ+ A+P A  GRD+IGLAETGSGKTGAFAIPILQALL+ PQRLFAV++APTRELAFQINEV EALG  I L++VC+VGGIDM  Q++ALA +PH+V+ATPGRLVDHL++TKGFSLRT+KFLV+DEADRML MDFEEE+N++L+V+PRER T+LFSATMT KVAKLQ+ASL DP++VEV++KF TPKTLVQQYLFIPAK KDCYLAYVL+EF GQSTI+FV+TC+NA RV ++LR LGF A+CLHGQ+ QPKRLGAL KFKSG RN+L+ATDVASRGLDIP+VD V+N +IPSHGKDYIHRVGRTARAGRAGRSIAFVTQ
Sbjct:   36 TFKSLGVLDSLCDAINGIGWTKPTEIQQNAIPEALKGRDIIGLAETGSGKTGAFAIPILQALLQRPQRLFAVILAPTRELAFQINEVFEALGSAIALRSVCVVGGIDMMTQAIALAKQPHIVVATPGRLVDHLQHTKGFSLRTLKFLVMDEADRMLSMDFEEELNQILAVIPRERATYLFSATMTQKVAKLQKASLTDPVKVEVSNKFQTPKTLVQQYLFIPAKWKDCYLAYVLDEFKGQSTIIFVATCSNALRVTMVLRALGFGAICLHGQLSQPKRLGALNKFKSGLRNILVATDVASRGLDIPNVDFVLNFDIPSHGKDYIHRVGRTARAGRAGRSIAFVTQ 380
[Close]
BLAST of mRNA_D-dudresnayi_contig10503.553.1 vs. uniprot
Match: A0A835YP34_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP34_9STRA)

HSP 1 Score: 554 bits (1428), Expect = 2.580e-187
Identity = 276/350 (78.86%), Postives = 313/350 (89.43%), Query Frame = 1 
Query:  430 DDDKKSFESLGVTGPLCEAMNQLGWTHATEIQRQALPLAFAGRDVIGLAETGSGKTGAFAIPILQALLKNPQRLFAVVMAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALALKPHVVIATPGRLVDHLENTKGFSLRTVKFLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLRDPIRVEVAHKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGERNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQ 1479
            D ++ +F SLGV  PLC+A+ +LGWTHATEIQRQ+LPLA AGRDVIGLAETGSGKT AFA+PILQALL  PQRLFA V+APTRELAFQINEVMEALG  IGL+T C+VGGIDM  Q+VALA +PHVVIATPGRLVDHLENTKGF+LR +KFLVLDEADRML MDFEEEINK+L+V+PRER T+LFSATMTSKVAKLQRASLRDP +VEVAH+F+TPKTLVQQYLFIPAK+KD YLAYVLNE AGQS I FV+TC  AQR ALLLR LGF A+ LHGQM QPKRLGAL +FK+G R+VL+ATDVASRGLD+P+VD V+N ++P +GKDY+HRVGRTARAGRAGRS+AFVTQ
Sbjct:  401 DAERVTFASLGVVAPLCDAIARLGWTHATEIQRQSLPLALAGRDVIGLAETGSGKTAAFALPILQALLAAPQRLFAAVLAPTRELAFQINEVMEALGSTIGLRTACVVGGIDMVSQAVALAKRPHVVIATPGRLVDHLENTKGFNLRAIKFLVLDEADRMLSMDFEEEINKLLAVIPRERNTYLFSATMTSKVAKLQRASLRDPAKVEVAHRFTTPKTLVQQYLFIPAKYKDVYLAYVLNELAGQSVIAFVATCAGAQRAALLLRALGFGAIALHGQMSQPKRLGALSRFKAGARSVLVATDVASRGLDLPAVDAVLNFDLPPNGKDYVHRVGRTARAGRAGRSVAFVTQ 750
[Close]
BLAST of mRNA_D-dudresnayi_contig10503.553.1 vs. uniprot
Match: G4YJE0_PHYSP (Uncharacterized protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=G4YJE0_PHYSP)

HSP 1 Score: 533 bits (1372), Expect = 3.820e-184
Identity = 257/346 (74.28%), Postives = 301/346 (86.99%), Query Frame = 1 
Query:  442 KSFESLGVTGPLCEAMNQLGWTHATEIQRQALPLAFAGRDVIGLAETGSGKTGAFAIPILQALLKNPQRLFAVVMAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALALKPHVVIATPGRLVDHLENTKGFSLRTVKFLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLRDPIRVEVAHKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGERNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQ 1479
            KSF+ LGV   +CEA+  +GW+  ++IQ+QA+P   AG+D+IGLAETGSGKTGAF IPILQ+LL+NPQRL+A+V+APTRELA+QI E  EALG  IGLK  C+VGGIDM QQ VALA KPHVVIATPGRLVDHLENTKGFSLRT+KFLVLDEADRML MDFEEEIN+++ ++P ER T+LFSATMTSKV KLQRASL+DP++VE+ HKF+TP+TL Q YLFIPAK KDCYLAYVLNE AGQS ++F STCN  Q+V L+LRNLGFQA+CLHGQM QP RLGAL KFK+  RNVL+ TDVASRGLDIPSVD+V+N +IP+HGKDYIHRVGRTARAGRAG +I+FVTQ
Sbjct:   31 KSFQELGVDAAICEAIEAVGWSQPSKIQQQAIPHGLAGKDIIGLAETGSGKTGAFVIPILQSLLRNPQRLYALVLAPTRELAYQIGEQFEALGASIGLKCACVVGGIDMMQQQVALARKPHVVIATPGRLVDHLENTKGFSLRTMKFLVLDEADRMLSMDFEEEINQIVQLMPAERNTYLFSATMTSKVRKLQRASLKDPVKVEITHKFATPETLKQHYLFIPAKFKDCYLAYVLNEVAGQSVLIFASTCNGTQKVTLMLRNLGFQAICLHGQMPQPSRLGALNKFKAKARNVLVCTDVASRGLDIPSVDVVINYDIPTHGKDYIHRVGRTARAGRAGVAISFVTQ 376
[Close]
BLAST of mRNA_D-dudresnayi_contig10503.553.1 vs. uniprot
Match: A0A662XZC0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XZC0_9STRA)

HSP 1 Score: 529 bits (1362), Expect = 3.800e-182
Identity = 256/346 (73.99%), Postives = 298/346 (86.13%), Query Frame = 1 
Query:  442 KSFESLGVTGPLCEAMNQLGWTHATEIQRQALPLAFAGRDVIGLAETGSGKTGAFAIPILQALLKNPQRLFAVVMAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALALKPHVVIATPGRLVDHLENTKGFSLRTVKFLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLRDPIRVEVAHKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGERNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQ 1479
            KSF  LGV   +CEA+  +GW+  ++IQ+QA+PL  AGRD+IGLAETGSGKTGAF IPILQ LL+NPQRL+A+ +APTRELA+QI E  EALG  IGLK  C+VGGIDM QQ VALA KPHVVIATPGRLVDHLENTKGFSLRT+KFLVLDEADRML MDFEEEIN+++ ++P +R T+LFSATMTSKV KLQRASL+DP +VE+ HKF+TP+TL Q YLFIPAK KDCYLAYVLNE AGQS ++F STCN  Q+V L+LRNLGFQA+CLHGQM QP RLGAL KFK+  RNVL+ TDVASRGLDIPSVD+V+N +IP+HGKDYIHRVGRTARAGRAG +++FVTQ
Sbjct:   45 KSFAELGVDPAICEAIEAVGWSQPSKIQQQAIPLGLAGRDIIGLAETGSGKTGAFVIPILQNLLRNPQRLYALALAPTRELAYQIGEQFEALGASIGLKCACVVGGIDMMQQQVALARKPHVVIATPGRLVDHLENTKGFSLRTMKFLVLDEADRMLSMDFEEEINQIVQLMPADRNTYLFSATMTSKVRKLQRASLKDPAKVEITHKFATPETLKQHYLFIPAKFKDCYLAYVLNEVAGQSVLIFASTCNGTQKVTLMLRNLGFQAICLHGQMPQPNRLGALNKFKAKARNVLVCTDVASRGLDIPSVDVVINYDIPTHGKDYIHRVGRTARAGRAGVAVSFVTQ 390
[Close]
BLAST of mRNA_D-dudresnayi_contig10503.553.1 vs. uniprot
Match: H3GTT0_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=H3GTT0_PHYRM)

HSP 1 Score: 528 bits (1361), Expect = 3.820e-182
Identity = 258/346 (74.57%), Postives = 299/346 (86.42%), Query Frame = 1 
Query:  442 KSFESLGVTGPLCEAMNQLGWTHATEIQRQALPLAFAGRDVIGLAETGSGKTGAFAIPILQALLKNPQRLFAVVMAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALALKPHVVIATPGRLVDHLENTKGFSLRTVKFLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLRDPIRVEVAHKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGERNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQ 1479
            KSF  LGV   +CEA+  +GWT  ++IQ+QA+P   AG+D+IGLAETGSGKTGAF IPILQ+LL+NPQRL+A+V+APTRELA+QI E  EALG  IGLK  C+VGGIDM QQ VALA KPHVVIATPGRLVDHLENTKGFSLRT+KFLVLDEADRML MDFEEEIN+++ ++P ER T+LFSATMTSKV KLQRASL+DP +VE+ HKF+TP+TL Q YLFIPAK KDCYLAYVLNE AGQS ++F STCN  Q+V L+LRNLGFQA+CLHGQM QP RLGAL KFK+  RNVL+ TDVASRGLDIPSVD+V+N +IP+HGKDYIHRVGRTARAGRAG +I+FVTQ
Sbjct:   29 KSFAELGVDSAICEAIAAVGWTAPSKIQQQAIPHGLAGQDLIGLAETGSGKTGAFVIPILQSLLQNPQRLYALVLAPTRELAYQIGEQFEALGASIGLKCACVVGGIDMMQQQVALARKPHVVIATPGRLVDHLENTKGFSLRTMKFLVLDEADRMLSMDFEEEINQIVQLMPAERNTYLFSATMTSKVRKLQRASLKDPAKVEITHKFATPETLKQHYLFIPAKFKDCYLAYVLNEVAGQSVLIFASTCNGTQKVTLMLRNLGFQAICLHGQMTQPNRLGALNKFKAKARNVLVCTDVASRGLDIPSVDVVINYDIPTHGKDYIHRVGRTARAGRAGVAISFVTQ 374
[Close]
BLAST of mRNA_D-dudresnayi_contig10503.553.1 vs. uniprot
Match: K3WTS8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTS8_GLOUD)

HSP 1 Score: 528 bits (1359), Expect = 4.720e-182
Identity = 251/346 (72.54%), Postives = 299/346 (86.42%), Query Frame = 1 
Query:  442 KSFESLGVTGPLCEAMNQLGWTHATEIQRQALPLAFAGRDVIGLAETGSGKTGAFAIPILQALLKNPQRLFAVVMAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALALKPHVVIATPGRLVDHLENTKGFSLRTVKFLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLRDPIRVEVAHKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGERNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQ 1479
            K+FE LGV   +CE++  +GWT  ++IQ+Q +P    GRD+IGLAETGSGKTGAF IPILQ LLKNPQRL+A+V+APTRELA+QI+E  EALG  IGLK  C+VGGIDM  Q VALA KPH+VIATPGRLVDHLENTKGFSLRT+++LVLDEADRML MDFEEEIN+++ ++P ER T+LFSATMTSKVAKLQRASL++P++VE+ HKF+TP+TL Q YLFIPAK KDCYLAYVLNE AGQS ++F STCN  Q+V L+LRNLGFQA+CLHGQM QP RLGAL KFK+  RN+L+ TDVASRGLDIPSVD+V+N +IP+HGKDYIHRVGRTARAGRAG +++FVTQ
Sbjct:   28 KTFEELGVDSAICESIQAIGWTKPSKIQQQTIPHGLEGRDIIGLAETGSGKTGAFVIPILQTLLKNPQRLYALVLAPTRELAYQISEQFEALGASIGLKCACVVGGIDMMSQQVALARKPHIVIATPGRLVDHLENTKGFSLRTMRYLVLDEADRMLSMDFEEEINQIVQLMPAERNTYLFSATMTSKVAKLQRASLKNPVKVEITHKFATPETLKQHYLFIPAKFKDCYLAYVLNEVAGQSVLIFASTCNGTQKVTLMLRNLGFQAICLHGQMTQPNRLGALNKFKAKSRNILVCTDVASRGLDIPSVDVVINYDIPTHGKDYIHRVGRTARAGRAGTAVSFVTQ 373
[Close]
BLAST of mRNA_D-dudresnayi_contig10503.553.1 vs. uniprot
Match: A0A024UX28_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024UX28_9STRA)

HSP 1 Score: 526 bits (1355), Expect = 1.220e-181
Identity = 257/354 (72.60%), Postives = 308/354 (87.01%), Query Frame = 1 
Query:  427 EDDDK---KSFESLGVTGPLCEAMNQLGWTHATEIQRQALPLAFAGRDVIGLAETGSGKTGAFAIPILQALLKNPQRLFAVVMAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALALKPHVVIATPGRLVDHLENTKGFSLRTVKFLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLRDPIRVEVAHKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGERNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQ 1479
            EDD++   KSF  LGV   LCE++  LGWT  ++IQ+++LP A AG+D+IGLAETGSGKTGAF IPILQ LL +PQRLFA+V+APTRELAFQI+E  EALG  IGLK  C+VGGIDM  Q VALA KPHVVIATPGRLVDHLENTKGFSLRT+K+LVLDEADRML MDFEEEIN+++ ++P ERRT+LFSATMTSKVAKLQRASL+ P++VE+ HKF+TP+TL Q+YLFIPAK+KDCYLAYVLNEFAGQS ++F STCN  QR+ L+LR+LGF A+CLHGQM QP RLGAL KFK+ +R++L+ TDVASRGLDIPSVD+V+N +IP++GKDYIHRVGRTARAGRAG +++FVTQ
Sbjct:   21 EDDEQIEDKSFSELGVNPALCESIAALGWTRPSKIQQKSLPPALAGKDIIGLAETGSGKTGAFVIPILQDLLASPQRLFALVLAPTRELAFQISEQFEALGSSIGLKCACVVGGIDMMNQQVALAKKPHVVIATPGRLVDHLENTKGFSLRTMKYLVLDEADRMLSMDFEEEINQIIQLMPNERRTYLFSATMTSKVAKLQRASLKSPVKVEITHKFATPETLAQKYLFIPAKYKDCYLAYVLNEFAGQSMLIFASTCNGTQRMTLMLRSLGFPAICLHGQMTQPNRLGALNKFKAKQRSILVCTDVASRGLDIPSVDVVINYDIPTNGKDYIHRVGRTARAGRAGIALSFVTQ 374
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10503.553.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYP9_ECTSI4.470e-22695.14DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
W7TSS5_9STRA3.280e-19076.99Dead deah box rna n=3 Tax=Monodopsidaceae TaxID=42... [more]
A0A7S0SXP7_9STRA1.810e-18976.86Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A812RT96_SYMMI1.420e-18876.52DDX47 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A835YP34_9STRA2.580e-18778.86P-loop containing nucleoside triphosphate hydrolas... [more]
G4YJE0_PHYSP3.820e-18474.28Uncharacterized protein n=21 Tax=Peronosporaceae T... [more]
A0A662XZC0_9STRA3.800e-18273.99Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
H3GTT0_PHYRM3.820e-18274.57Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
K3WTS8_GLOUD4.720e-18272.54Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A024UX28_9STRA1.220e-18172.60Uncharacterized protein n=5 Tax=Aphanomyces TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10503contigD-dudresnayi_contig10503:206..10894 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score655.2
Seed ortholog evalue2.4e-185
Seed eggNOG ortholog2880.D7FYP9
Preferred nameDDX47
KEGG koko:K10352,ko:K14777
KEGG Pathwayko04530,map04530
GOsGO:0000339,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003725,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006413,GO:0006518,GO:0006725,GO:0006807,GO:0006915,GO:0007154,GO:0007165,GO:0007166,GO:0008026,GO:0008135,GO:0008150,GO:0008152,GO:0008186,GO:0008219,GO:0008380,GO:0008625,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010468,GO:0010501,GO:0012501,GO:0016070,GO:0016072,GO:0016281,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0019538,GO:0022613,GO:0023052,GO:0030490,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0042623,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0070035,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097190,GO:0097191,GO:0140098,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0330@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko04147,ko04812
Hectar predicted targeting categoryother localisation
Exons8
Model size1479
Cds size1479
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10503.553.1prot_D-dudresnayi_contig10503.553.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10503 206..10894 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927552.68321-CDS-D-dudresnayi_contig10503:205..3191622927552.68321-CDS-D-dudresnayi_contig10503:205..319Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10503 206..319 -
1690556804.1880507-CDS-D-dudresnayi_contig10503:205..3191690556804.1880507-CDS-D-dudresnayi_contig10503:205..319Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10503 206..319 -
1622927552.6962914-CDS-D-dudresnayi_contig10503:813..9751622927552.6962914-CDS-D-dudresnayi_contig10503:813..975Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10503 814..975 -
1690556804.1993604-CDS-D-dudresnayi_contig10503:813..9751690556804.1993604-CDS-D-dudresnayi_contig10503:813..975Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10503 814..975 -
1622927552.7113955-CDS-D-dudresnayi_contig10503:1773..19291622927552.7113955-CDS-D-dudresnayi_contig10503:1773..1929Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10503 1774..1929 -
1690556804.2078788-CDS-D-dudresnayi_contig10503:1773..19291690556804.2078788-CDS-D-dudresnayi_contig10503:1773..1929Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10503 1774..1929 -
1622927552.7265372-CDS-D-dudresnayi_contig10503:5582..57111622927552.7265372-CDS-D-dudresnayi_contig10503:5582..5711Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10503 5583..5711 -
1690556804.216619-CDS-D-dudresnayi_contig10503:5582..57111690556804.216619-CDS-D-dudresnayi_contig10503:5582..5711Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10503 5583..5711 -
1622927552.7418647-CDS-D-dudresnayi_contig10503:6738..68791622927552.7418647-CDS-D-dudresnayi_contig10503:6738..6879Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10503 6739..6879 -
1690556804.2267427-CDS-D-dudresnayi_contig10503:6738..68791690556804.2267427-CDS-D-dudresnayi_contig10503:6738..6879Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10503 6739..6879 -
1622927552.7621229-CDS-D-dudresnayi_contig10503:8208..82831622927552.7621229-CDS-D-dudresnayi_contig10503:8208..8283Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10503 8209..8283 -
1690556804.237245-CDS-D-dudresnayi_contig10503:8208..82831690556804.237245-CDS-D-dudresnayi_contig10503:8208..8283Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10503 8209..8283 -
1622927552.7778292-CDS-D-dudresnayi_contig10503:9149..92991622927552.7778292-CDS-D-dudresnayi_contig10503:9149..9299Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10503 9150..9299 -
1690556804.244285-CDS-D-dudresnayi_contig10503:9149..92991690556804.244285-CDS-D-dudresnayi_contig10503:9149..9299Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10503 9150..9299 -
1622927552.7902746-CDS-D-dudresnayi_contig10503:10342..108941622927552.7902746-CDS-D-dudresnayi_contig10503:10342..10894Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10503 10343..10894 -
1690556804.2647595-CDS-D-dudresnayi_contig10503:10342..108941690556804.2647595-CDS-D-dudresnayi_contig10503:10342..10894Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10503 10343..10894 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10503.553.1

>prot_D-dudresnayi_contig10503.553.1 ID=prot_D-dudresnayi_contig10503.553.1|Name=mRNA_D-dudresnayi_contig10503.553.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=493bp
EGGSCEDQGGGGGEEEEEEEEEDSAVGGGAGGKGGVVDDDYSSSDERSDD
ETSEEDEDDAEPGATKAKRGTEDKAAKEGAGKPVMAANGASVQESGEEEE
EEEEDEDEEEDDGVKGEGPKSAEGAGAEELDSEKEETAEASAEDDDKKSF
ESLGVTGPLCEAMNQLGWTHATEIQRQALPLAFAGRDVIGLAETGSGKTG
AFAIPILQALLKNPQRLFAVVMAPTRELAFQINEVMEALGVGIGLKTVCI
VGGIDMFQQSVALALKPHVVIATPGRLVDHLENTKGFSLRTVKFLVLDEA
DRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLRDPIRV
EVAHKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNA
QRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGERNVLIATDVASRG
LDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQ
back to top

mRNA from alignment at D-dudresnayi_contig10503:206..10894-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10503.553.1 ID=mRNA_D-dudresnayi_contig10503.553.1|Name=mRNA_D-dudresnayi_contig10503.553.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=10689bp|location=Sequence derived from alignment at D-dudresnayi_contig10503:206..10894- (Desmarestia dudresnayi DdudBR16 monoicous)
GAGGGGGGGTCGTGCGAGGACCAGGGGGGGGGGGGGGGGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGATAGTGCAGTTGGCGGTGGTGCTGGAGGGAAAG
GAGGAGTGGTGGATGACGACTACAGTAGTAGTGACGAACGTTCGGATGAC
GAGACGAGCGAGGAGGACGAGGACGATGCGGAGCCTGGGGCCACGAAGGC
GAAGAGGGGCACGGAGGACAAAGCCGCGAAGGAAGGCGCCGGGAAACCCG
TCATGGCGGCGAATGGCGCCAGCGTGCAGGAGAGCGGGGAGGAGGAGGAG
GAGGAGGAGGAGGACGAGGACGAGGAGGAAGACGACGGGGTAAAAGGCGA
AGGACCCAAGAGTGCAGAGGGCGCTGGGGCAGAGGAACTGGATAGCGAGA
AAGAGGAAACGGCAGAGGCGTCGGCGGAAGACGACGACAAGAAATCATTC
GAGTCGTTGGGGGTAACGGGCCCGCTGTGCGAGGCCATGAATCAGCTGGG
CTGGACACACGCCACGGAGATTCAGAGGCAGGCACTGCCCCTCGCGTTCG
CGGTGAGAAAAAATGGCGCGCCCTATCTAATGTTCGAGTACTACTACTAT
GCACTATTTATGGAGCTTGTGTACGACACCGTCGTCCATGTCGTATACGA
AGTAGGTTTGTATGTGTCGTTATAGCAGACGCTGTTGGTTGGGTCTTGCT
GTCTTTGCCACGTTGTCCCTGGAAGATACCTGGTACCTGGTACAGTATTA
TTTTTGCTCTTTGTTTTTTGCGATCGATGGATGCGCAGGCGGATACGGAT
AGAGCGGACAGTATTTGAGAGCGTTCTTGTTTGTTGACAGTTGAGATGAG
GAGGAAGGTAGCCCCCGTAAAATATATCATACCTGGTACCTGGTACCCAG
TAAATATTTTTTGGCTCACTGTGAAAATACGTGTAGTCTAACTCCCCATT
TATTTATTGCTTAGTTAGCTATCTGCACATACTTTTTGTATACTTATTTT
TAAGGTATAAAAGCCATTACACCAGCGATGTACGTAGTGTTATCGGTTCG
CGTGGTACGTGTGGGATTGTGTGACGATGGCGCGCCAATCACGCAGGGTC
GCGTAAGCACGAAGCTCGCCACCACGGCAAACGCGAGTACCACTATTTAG
ACTATCGGTATTACAGCATATGCGCGCTGCTCTAAATTGCTTGCTCTATA
TACACGTACGTATGTCATCACCTTCGCTCTAATACGCCACACACTACTAC
TGAGATGGACGTGACATCAAGGTTGTAGCGGTAGAGCTGTGATAGTGCAG
GAGTGAGTGTTGCTATTGCCGTATTTTTGCCCGTACGGCCTACAGAGATA
CGTGTAGTAATTATAAGTACAAGTACATCCAGCTTACGTTTCAAACTGGT
TCCGGGTCATCCAAGGGGTATTATTCAGTCGCGAATTAAGCAGAGAGGCG
TATCATATAATGACTGCGACGCAGATGTATCACGTACGAAACTGAACATT
CACGCTCGTCGTTTGTGGGAGATAATGCGTTAATGTAGACTGTGACCTGG
CCGTCTTGGCGCTGCTCTCCTTTTGTGTTTGACGGGGCCTGACAGGGCCG
GGACGTTATCGGACTCGCGGAGACGGGCTCGGGAAAGACCGGCGCGTTTG
CCATCCCCATTCTCCAGGCGCTGCTGAAAAACCCGCAGCGTCTCTTCGCT
GTGGTCATGGCTCCGACTCGAGAACTAGCTTTCCAGATCAATGAGGTGAG
AAAGAAGTCTGTCATGCTGGTCTACCATGCAGCTAATATGTACCACTACA
CTGTTGTACGGGTATGATGCCCTTGTGCTTCCCGCAACCCGTTTTGGCTG
CTGGGCCTCAAGAGATATTCCGTCGTGGGTTCGGTTAGTGGCGCTTTCGG
CGGGTGGGCGTACGACGCGTGCCCACGCCTGCCGTGTACTCTTGTCTGAC
GTTTTTTTTTAAAGTTTACGTATTGGGGTCCTGCACTTTGGGTGCACGAC
GTGGTCTTTGTGTGGGCGCGTTTTGTTTTTTGTCCGTTGTTCTCGACTGG
GCGTTGCATTAGCAACTCTTGTGCATCCTTCCGCGGCGTTGCCCCCGCGC
AATATATATAATACACTGTATACATATGAATGTATTGTCTGTAACGCTGA
AGAGGCTGCAACGTCCTAATGTGGGACCGCGCTGGTTGTGAGGTTCGAGA
GATTTTACATAGGCTGGCTGTTATCGTCTCTTTCTTGTAAGGGTAATCGA
GGAGACTCGCTACCGCATACAAATAGGATATAGAGTGATCCTTCAGGGGA
ACCGAGCCGTGGATATTCAATGTTTAAACTCCTTCGGTGAGGTGAGTGTA
TCATAGATAGGGGGGATCATTCATTTGTGTAGTTTATGTGACCTAGAATA
TAGTTATCTCCACATTGTGCTCTACAAAATACAAAATACAGTCAGTATCA
CCCTTCCCCTTTTTTCCCTTAAGGGCCCCGCCGTCGCGGAGTAAGTTAGT
CGTTTTTTTACAGACGCGGACGCGCACAAGACGGTATGATGTTAGCACGC
TGGTCCTGACCGTTTTCCCACCCTGTTGCTGTCCTCTTTCGTGCATTGTG
GCCTCGTAAAGGTCATGGAGGCTCTCGGCGTTGGCATTGGCCTCAAGACC
GTGTGCATTGTGGGTGGCATTGACATGTTCCAGCAGGTAATAATGGTAGC
AAAAGAAAAAAGGGGGACACATCGTAGGAGGGCGTTTGCGGTTAGTTTTG
TGGCTGGAGGGAGGTGTAGGGGTGACCGTCCTCGTGTCTTCTTGCTGACA
CCAAACATGATATCATATAGTTGGTTCGTGCTCGCCGCTCGTCCTCTGAG
CAGCATAGATTTTGTTGTTGTTGCATACTACATCTTGCGTGTGTTTGTTA
TACTCCGACGACTCCAGGTAGGACAAATAGTAAACGGTAATTATTTTGAG
ATTGGACAGTTTGTTGATGCTACGAGGAAATCAATAGGGAAAGGTTTTGG
TGGAAGTCATAAAACGACATAAATTTAAATCGTGGACATATGACTCATGG
ATAAAAAAATCATAAAGCTCCAGGTTCAATAGGCTATTGATCCGTCCTTT
CCTGTCGCGAGTGACTCGCTGAAAGGGATGTGTTGATTGGGGAGGGGTTG
GTCGAAATTCTGATATCAAGAGCGAACGCGGTGGAGTGGGGCAGGGATGG
GAGCGGACCGGGCGGGGGGGAGAGGGGGTGTCTTCGCTTACACGGAGTCA
GTCGAGGGGTGCAGGGTTTCCACGATAGCGGAGGTGGTTCTGAACCGGTG
TCAACCTATGGTGGTGGCTCGTTGCTTGTTTTCTGGCGGTTTAGCCTGCG
GGCTAACGATGCTCTCTCGTGGCAGTTGACTTTTCGCGCGCGACTTCTTT
ATTCTTGCTATGAAAAAGACACACCGTGTGTGTTGTACCGCGGCACTTTT
TCTCTGCTGATGGTACAAGGCCTAACGACACCCGTTGTTTTGGGAGTCAT
TCAACCGTAGACTAGTTAGTCATCCAACGATAGGGGTGTAGGAGGTGTTT
CAAAACGATCATCGGATTGGGAATAGCGGATGCTTCAAATTCACCCCCGT
GGAACAACTGAATCAACATGTCCAGTTTTCCAACGGAACGTACGAACATC
GTAGGAGCGGGGATCGTGTAATTTGAACCACCCGTTAAGGGACGAATATA
AACCACCCCCTCCCATAGCCAGGGTTTATTTGTGGGTCAACCAACCCCCA
CCCTCCGCCTTTTACTCATATCGTTTTCTCGTTGCAAAATTACTTTTGTC
AACCATTGTTGTTATTGTTACCCGCTGTGTTTGGCAACCATTTTGGTTGA
TGTGCACGCCATACGGCATGTAAAGTCCGGGGTGGTACCCAACCATGACA
AACGCGCCCCAGATTAACCGCACACGCAACACAAACTCGATATTTTGTTT
CGCGTTTTTTTTTCTTCTTTGACTGTTAACTCTTTTGTCCCACCCCCCCC
CCGTTTTTTGTTCAGTCCGTTGCGCTGGCCCTGAAGCCGCACGTTGTCAT
CGCCACCCCCGGACGCCTGGTGGATCACCTGGAAAACACGAAGGGCTTCA
GCTTGAGGACGGTCAAGTTCCTGGTGCTGGACGAGGCTGATCGAATGCTT
GGCATGGTGAGAGCTCTATTAAGAGCTATGAAATATATCGATGCTTTTAT
CATGTTTTTTTTTTAGAATTTCATGATTTTTGATTTGGGGGGAGGGACGG
AGGGAGGGGTGGTTACTTTTTTACTGCCCGTGGTTGATGGTGTCGTTCCA
GTCGTTTCCGTCAAGGGTACTAGGGCGGAGATCGACGATAATGATTGCTT
GTGGAGCGATTTTGTTGTTTGGAGTGTGTCATGTTGCACATGTATTTTTG
GCGTTTGGTATTTTATGTGTTTCTTTACTATTTTTTTCAAATGCATGTTT
CAAACTGGTTCGGGGTCCAGGGGATAATCATCAACTTCTCTACTACTGTG
TGATACTTCGGTCGCGCGTTTTCTCAGGCTCTTCAGACTCGCCGCGCTTC
ACTTGTTGTTTTTTCATGTGCTTGATGTTCGGCAGCGCGGGTTCTTATCC
ATAGTACGGTGATAGGATTGTCTATTGATACGATGGTGCGTTTGCATGGT
TGTCGTACTAATAGTAGGTAAACCCGTGGAAAACCTTTTGGGGCGTGTTT
CACAGGAAGACCGGGCATGATGCACCTACCATGGTTGCACCTGCCATGTT
CTTATATGTTGTTACTGTTGTTTTATTCACTTTAAACAGTCGCACTTTCT
ACCCTATATGACATCCAGCAGCGTACTTATAGAGTCTGTACCGATTGTCT
GGTCTTACTGTAGAGAGAATCGAAATTCCGTGGTCACTGGCTAAATATGG
AGTACACGATCGCAAATTGAAAAAGGACAAGGACAATATCATTATTCGAA
AACAAGACAAACAGAAAACGCAAGACGAATGAAGAAGAGCCAAGAAGGAG
AGAGGTACATAACAGACAACAGATGAAAGGACCATGGGGGCTAACGTGAC
CACCTCTATCTGATCTGCAGGCGCCGCCGTTTTGTGCTTAAGTTACTACC
TACTACTGTACCTCTACTGTGGTGTATCTCTTATTGCCCCCGTTTCTGCT
TTTGCCGGACCCACCCTGTCCCCTTATGTGCAGGACTTTGAGGAGGAGAT
CAACAAGGTGCTGAGCGTGCTGCCCAGGGAACGCCGCACGTTCCTGTTCA
GCGCCACCATGACGTCCAAGGTGGCCAAGCTGCAACGGGCGTCTCTCAGA
GATCCGATTCGGGTGAGAGAGGATACAAATAAATAAAGGCGAACCACGAA
AAGCTGAACATTGGAACGCTGTGAGGATTAAGCTTTATTTTAACGCATCT
GCCGGAGGATAACAATGGTTAACATTTTTTTTTTTTTTTAGAGAGATTGG
CCTCTTGCTGTGCTATTTTATGTTTTGTGATGCCAGCCGTGTATGATACG
ATGGAAACAGACGGTAGTAGTTCACGAGGACGAAGAACTATCTCCATGTG
TCGTAGTGTTTGAGGTATAGGTATAATGTAAATGGTGGTGCTCGCGTTTC
GTTTTTCAGTGGGGTGTTTGGTTGTGTGTTGTTTTGTTTGTTCGTTTATT
TTGTTTCGTTTTTGGTTTGTTGTGTTAAAAAAATACTCTGTTGTATGCGC
TCGGCGCTGCGTAGCGCAATGGTTGTCGCATTTTTTGGGCGTGGCGGTGT
GGCGCACGGCTTTCTCACCACCATGTCGTATTGCGATAAAATCGCTCGAC
TATGATCGTTGGTGTACGCACGCACACGACGTCGTATGCGTGTTGTATGC
CCGGCAATTAGCCCAGCCCGGAAATGTGATTCTTCCTCCGTCAACCCCTC
CGTCCGTCCATCCTGGCATTGTAGGCATTTTTCACTGAGAATCTGCTACT
AATATTATACACACACGAAGCATATAATGTGGGGACATGGGGTTGTTGAC
GTGGTATATATCCAGTGAGCTTTGAGACGAGACGCCGGTCGAAAAGAGGT
ACGGCTCTCCCCAACCATTAATAAACTACTCTCAACCATGTTGGATGCCC
GCTCATACGTTTGGATTGGATTTTAGGAATACCCTTTATTTCAGTAGTCT
AGATTAATCGACTAGAGCAATAACACTATAGTATCATCTTGTGGTCATAC
TCCGTGGGGGCGGAGGGGGGGGGGGCACGGGCAGATTATTACGTTGTTAC
CCCCAAGTGTCACACACACGGTATTATCAACCATGATATGCGTACATACC
TTGTGCGTGGCGAGGCGTTGTTTGCGCATGCGTGCGTGCGGAGATGGTAG
TCCCCATTGCGGTACAACAACAGTACGTGGGAGTATAACCACGGCTGGTA
AACGTGCAATCTATGGGTTCCTATCATTGAAGAGGGTGTTCAACGAACCA
CCTGAGGTAGCTCGGTTTGTTGACTATGTCCGCAACAACACAAGGGTGGT
ATAAAACTAGCAGCTGTCATAACATCTGCGCAGTGCTTGTGCAACGCAAC
ATGGCCGACTTTTGTGGGATGGGATAGGGATGAGATTTGAGGTCGATACT
CTAATGACTATGGCATGCGTTTATCATGAACACACACACCCCCTCCCTTT
CCTCTCCGAGTTCATGAACATGCGACGGTTACGGCTAATGGTATAGGAGT
ACAAGGGCGCCTGTCGGGCAGTAGTCTCGCAGGATTTAAGGGCGCATGCC
AAGGGTGTGGAGGGAAACCCACGAGGCAAAATGTCGGTTAGGGCGTAAAT
ATCGTGCTAAAAGAGTAAGGAAAAACACGTGTACCCGTAGGTAAAATGTG
TTTTCAATATTAGAGGCGAGACGAAACCCAAGCATATAGGAGACATGCTG
ATGACATCCCCAAATGGTAGGCAAAACTCGTATAATATATTATGAAGGAG
CCTGTATATTATGTATGCCCACGTGTAGCCAATAAGCTTAGCTAACTTAA
AGCATTCGGGGTGGTCCGCATTCGACACGGATATTTTTTTCTTATCCCAT
TTATTATCTTCGCCCTATTCCTTCTCCAACTCCATATCTCTGGTCGTAAC
TCAAACTCGGGATCATGTAGTAGACGCTCCTCCCCCCGCTCCACTGCGGT
ACGTGTATATATTTTTATCGCGCGAAGGGTCCAGCACTTTCTTCCCTTGT
TGACTGTCACTGAATTGTGCTTACTCACGCTCTTCTCGCTCTTTCCGCGA
CGGAAGGTGACCCATAAAAGTGTAATTTTGTTTCACCGGGAATCGAACCC
TGAACTTCCGGTAGCAGAGGCGACAACGTACAATCACATAGACCATTGAT
AGCGTCACCCCTGATTAAAAAGCAAAAAAACATCGGCTGCGACTGACACA
CTCCCAGGCGAGACAGGGTATTATGAGAAGGGTAGTTAGGCGCCATTGTG
AAGGCGTTGACTCCTATCATCTAGTAGCTTGTTGTGCACCAGACATCAAA
CAAAGCGTGTTCAAACAATAGGAGTTGTACAGTGCACAACAACAGAAGAA
TGACAGATAGATACAGATGATACTTGTAGTACAACAGTAAATTATCTGCA
GTACTACAGTAGTAGTAGTATAGTAGTATCATAGTAGTAGTACAAGGGCG
CTTGCCGGGCAGTGAACTGCCCGACAGGCTCGCAGGATTTAAGGGCGCAC
GCCAAGGGTGTGAAGGAAAACCCGCAAGGCAAAATGTCGGTTAGGGCGTA
AAGATCGTGCTAAAAGAGCAAGGAAAAATACGTGTACCCGTAGGTAAAAC
GTGTTTTCAATATTACTAGAGGCGAAACGAAACCCAAGCGCCCATATAGG
AGACATGCTGATGACATCCCCAAAATGGTAGGCAAAACTCGTATAATATA
ATATGAAGGAGCGGAAGGTGGCCCATAAAATTGTCTTTTTTTTTCACCGG
GAATCGAACACCGAACTTTCGCTAACAGAGGCGACAACGTACAATCAGAT
AGACCATAGATTGCGTCACCCCTGATAAAAAACAAAAAACATCGGCTGTG
ACTGACACTCTCCCAGGCTAGACAGGGTGTTGTGAGAAGGGTAGCTTGTA
GGCGCCATTGTGAAGGAGTTGTCACCAATCATCTAGTAGCTTGTTGTGCA
CCGGAGACATCAAACAAAGCGTGCGTTCAAACAAGAAAACGAGGAGTAGT
ACAGCACACAACAACAGTAGTGGTAGTAGAGTGACAGATAGATACAGATA
CTATTGTACTTTTAATAGTACAACAGTACAGTACAGGACAGTAGTATATA
CTGTAGTGGTAGTGGTAGTAGTAGTAGTAATAGTAGTAGTTAGTAGTCAG
CAGAAGATCTATTGATAGTATCATATATCACGGCTGATGTCTTTGTATGT
AAACATAATAATATCAGTATTTAATTGTGTTGAAGCAACAAAAAACGAAG
CGGCGGGTTCACTATGTAATTACAAATAATCTGTGGTGTGACGTCGTTTT
ATTCCAAAAACAACAAAAAACGAAGAAATCAATAAACCTTTCGGCTGCTT
TCGGCGTTTGTTTCGTATTTGTTGTGCAGTTGCGGACAACAAAACCAACA
ATAGTTGTGCCGGGCTTTGAGGGAGCAGAGATCGAAAATCCTGGTCATAT
ATAGACGTCGAATCCTGGTCGCACGGCCATTTGGGATCATCCTATATAGG
TCTATACGTCACCTGTACCTTTGTTGGAGACATATTTGGCAGAAATGGTG
GCGAGCGATTTTGCCATTGTCATCCTTTGGAGAAAAAAAATACCAATACC
CCGTCCTTTCTTCGGAAGCGCCGGGTCGATGACTACTACCGTAGTGATGG
ATCCGCTGGCGTTTTTTACCGTGCGTTTGTTTTGCTTTTGCTCCGCACCG
TGAGCTTCATTCGTGTTGCTGTACGCACCGTTGCGTGGTGGTTTGGTTTG
TTGCGCGGCGACCAGGTGGAGGTGGCGCACAAATTCTCCACGCCGAAGAC
CCTGGTGCAGCAGTACCTATTCATACCGGCCAAGCACAAGGACTGTTACC
TGGCGTACGTGCTCAACGAATTCGCCGGACAGAGCACGATAGTGTTCGTG
TCAACTTGCAACAACGCTCAGGTGTGTGTGTGGTGTGTGTGTGTGTGTTT
GTGTTTGCAGCCGTCGTTGGCTGTACAAAGTATTATTAGTCCGAATTCCT
GGAATGGTCTGGCGTAGGATATCATATTAAGGCAGCCGGTGTAGAGTCCA
AACTTACTATCATCTACTAAAAGTATGATAGTAGTGTTTTTTTTTTGTAG
AAGGAGAGAGAATTCTTGGAATGTTCTGATCGATCACCTCATAGCCAGGG
AAGCCCGGTACAGAATAGTTAAAAAAAAATCGAAACAGAAGGACCGAAAA
ATATGTACGCGATGTGCGACAGGTGTATGCTGTGTGGTTTTTGTGGGTTA
AGCGGCGGTTTTGGGGCCAGCGATGGTATGATAGTGTCACGCGACGTACA
CCGGCACTGACTGTCCTGCACGAAGAGGGTCGCGTACAGTGGAAGTATGT
GGCGCTCCTTTTTTTGTGCGTTGTTGTGCATCTTATACCCGAGAGCATGC
TCTCTATAAATACGGGGTATGGTTGGCCGGGTCTCGTAAGTAAGAAGTTC
TTCCCCGTCTTCCGTCGCGAAAGGTTTTCCCGTCGCCGTTTCCATCTGAG
GTGTGCTGAGTGGTATACTGTTGTAGTCGATTTTCTTCATTTGGCAGCCC
TTAGAACTGCTACTGCGGGAGATATGTATGGCAGGATCCACAGGAATATC
GTGTTTTCACGCTCTCACGCCCCACGTCAGTTTTTTTTCCAGTTTGGTGA
ACGGCGATCCGTTATTGTAACATTATCTACCTTTTGCGCGGCGCCCCCCC
CCCCGCCCTCCTTGGCCAGAGAGTGGCCCTCCTCCTCCGCAACCTGGGCT
TCCAAGCGGTGTGCCTTCACGGGCAGATGGGTCAGCCGAAACGCCTGGGA
GCTCTCGGCAAGTTTAAGTCCGGGGAGCGGAACGTACTGATCGCTACGGA
TGTCGCCAGCCGTGGACTTGACATTCCCTCGGTGAGTGCTCGTGTGATAC
ATATATACTACATAGTACCATGTGTCTTTTGTTTTTTTGTTTTTGTTTGT
GTTTTTGTTTTTGTTCGTTGTTCATGGGTTTTATTTTCGAGTCTGTGTAT
TCTTTCTTTTTCTCGCGAAATAACCCGCCCTCCTTGGGCGCTGCTCTTTC
TCGTATGCATATTTTCCTTTATTTGTTTATTTGTTTTCCTTCTGGAGCGT
TACTACCGTGCCGGACCACTGGCGACATTTTTTTAGATGAGCTAATGTGA
GAAACAACAGTACGTGCCGGCACGTGTGTAGTATAGCTACTGTATAGCAG
CAGCAGTACCTTTTTGTGTTTACGGTAGTGTCTACCGAGGTGAATTTATC
ACCCCCCCCGACGCCAACTACTCAACTACTGACTACTGTGGCTGGCTGTA
TACCAATCGCCATTTTGTGTTTTGCTTTTTGTTTTTTGTGTGTTATGGCG
CTCTCGATGTTTGTTGTTGGTTCAGGTTGACCTCGTGGTGAACATGGAGA
TCCCCAGCCACGGTAAGGACTACATCCACCGCGTGGGGAGGACGGCGAGG
GCTGGCAGGGCCGGTCGCTCTATCGCGTTCGTGACGCAG
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig10503:206..10894-

>mRNA_D-dudresnayi_contig10503.553.1 ID=mRNA_D-dudresnayi_contig10503.553.1|Name=mRNA_D-dudresnayi_contig10503.553.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2958bp|location=Sequence derived from alignment at D-dudresnayi_contig10503:206..10894- (Desmarestia dudresnayi DdudBR16 monoicous)
GAGGGGGGGTCGTGCGAGGACCAGGGGGGGGGGGGGGGGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGATAGTGCAGTTGGCGGTGGTGCTGGAGGGAAAG
GAGGAGTGGTGGATGACGACTACAGTAGTAGTGACGAACGTTCGGATGAC
GAGACGAGCGAGGAGGACGAGGACGATGCGGAGCCTGGGGCCACGAAGGC
GAAGAGGGGCACGGAGGACAAAGCCGCGAAGGAAGGCGCCGGGAAACCCG
TCATGGCGGCGAATGGCGCCAGCGTGCAGGAGAGCGGGGAGGAGGAGGAG
GAGGAGGAGGAGGACGAGGACGAGGAGGAAGACGACGGGGTAAAAGGCGA
AGGACCCAAGAGTGCAGAGGGCGCTGGGGCAGAGGAACTGGATAGCGAGA
AAGAGGAAACGGCAGAGGCGTCGGCGGAAGACGACGACAAGAAATCATTC
GAGTCGTTGGGGGTAACGGGCCCGCTGTGCGAGGCCATGAATCAGCTGGG
CTGGACACACGCCACGGAGATTCAGAGGCAGGCACTGCCCCTCGCGTTCG
CGGAGGGGGGGTCGTGCGAGGACCAGGGGGGGGGGGGGGGGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGATAGTGCAGTTGGCGGTGGTGCTGGAGGGAA
AGGAGGAGTGGTGGATGACGACTACAGTAGTAGTGACGAACGTTCGGATG
ACGAGACGAGCGAGGAGGACGAGGACGATGCGGAGCCTGGGGCCACGAAG
GCGAAGAGGGGCACGGAGGACAAAGCCGCGAAGGAAGGCGCCGGGAAACC
CGTCATGGCGGCGAATGGCGCCAGCGTGCAGGAGAGCGGGGAGGAGGAGG
AGGAGGAGGAGGAGGACGAGGACGAGGAGGAAGACGACGGGGTAAAAGGC
GAAGGACCCAAGAGTGCAGAGGGCGCTGGGGCAGAGGAACTGGATAGCGA
GAAAGAGGAAACGGCAGAGGCGTCGGCGGAAGACGACGACAAGAAATCAT
TCGAGTCGTTGGGGGTAACGGGCCCGCTGTGCGAGGCCATGAATCAGCTG
GGCTGGACACACGCCACGGAGATTCAGAGGCAGGCACTGCCCCTCGCGTT
CGCGGGCCGGGACGTTATCGGACTCGCGGAGACGGGCTCGGGAAAGACCG
GCGCGTTTGCCATCCCCATTCTCCAGGCGCTGCTGAAAAACCCGCAGCGT
CTCTTCGCTGTGGTCATGGCTCCGACTCGAGAACTAGCTTTCCAGATCAA
TGAGGGCCGGGACGTTATCGGACTCGCGGAGACGGGCTCGGGAAAGACCG
GCGCGTTTGCCATCCCCATTCTCCAGGCGCTGCTGAAAAACCCGCAGCGT
CTCTTCGCTGTGGTCATGGCTCCGACTCGAGAACTAGCTTTCCAGATCAA
TGAGGTCATGGAGGCTCTCGGCGTTGGCATTGGCCTCAAGACCGTGTGCA
TTGTGGGTGGCATTGACATGTTCCAGCAGGTCATGGAGGCTCTCGGCGTT
GGCATTGGCCTCAAGACCGTGTGCATTGTGGGTGGCATTGACATGTTCCA
GCAGTCCGTTGCGCTGGCCCTGAAGCCGCACGTTGTCATCGCCACCCCCG
GACGCCTGGTGGATCACCTGGAAAACACGAAGGGCTTCAGCTTGAGGACG
GTCAAGTTCCTGGTGCTGGACGAGGCTGATCGAATGCTTGGCATGTCCGT
TGCGCTGGCCCTGAAGCCGCACGTTGTCATCGCCACCCCCGGACGCCTGG
TGGATCACCTGGAAAACACGAAGGGCTTCAGCTTGAGGACGGTCAAGTTC
CTGGTGCTGGACGAGGCTGATCGAATGCTTGGCATGGACTTTGAGGAGGA
GATCAACAAGGTGCTGAGCGTGCTGCCCAGGGAACGCCGCACGTTCCTGT
TCAGCGCCACCATGACGTCCAAGGTGGCCAAGCTGCAACGGGCGTCTCTC
AGAGATCCGATTCGGGACTTTGAGGAGGAGATCAACAAGGTGCTGAGCGT
GCTGCCCAGGGAACGCCGCACGTTCCTGTTCAGCGCCACCATGACGTCCA
AGGTGGCCAAGCTGCAACGGGCGTCTCTCAGAGATCCGATTCGGGTGGAG
GTGGCGCACAAATTCTCCACGCCGAAGACCCTGGTGCAGCAGTACCTATT
CATACCGGCCAAGCACAAGGACTGTTACCTGGCGTACGTGCTCAACGAAT
TCGCCGGACAGAGCACGATAGTGTTCGTGTCAACTTGCAACAACGCTCAG
GTGGAGGTGGCGCACAAATTCTCCACGCCGAAGACCCTGGTGCAGCAGTA
CCTATTCATACCGGCCAAGCACAAGGACTGTTACCTGGCGTACGTGCTCA
ACGAATTCGCCGGACAGAGCACGATAGTGTTCGTGTCAACTTGCAACAAC
GCTCAGAGAGTGGCCCTCCTCCTCCGCAACCTGGGCTTCCAAGCGGTGTG
CCTTCACGGGCAGATGGGTCAGCCGAAACGCCTGGGAGCTCTCGGCAAGT
TTAAGTCCGGGGAGCGGAACGTACTGATCGCTACGGATGTCGCCAGCCGT
GGACTTGACATTCCCTCGAGAGTGGCCCTCCTCCTCCGCAACCTGGGCTT
CCAAGCGGTGTGCCTTCACGGGCAGATGGGTCAGCCGAAACGCCTGGGAG
CTCTCGGCAAGTTTAAGTCCGGGGAGCGGAACGTACTGATCGCTACGGAT
GTCGCCAGCCGTGGACTTGACATTCCCTCGGTTGACCTCGTGGTGAACAT
GGAGATCCCCAGCCACGGTAAGGACTACATCCACCGCGTGGGGAGGACGG
CGAGGGCTGGCAGGGCCGGTCGCTCTATCGCGTTCGTGACGCAGGTTGAC
CTCGTGGTGAACATGGAGATCCCCAGCCACGGTAAGGACTACATCCACCG
CGTGGGGAGGACGGCGAGGGCTGGCAGGGCCGGTCGCTCTATCGCGTTCG
TGACGCAG
back to top