mRNA_D-dudresnayi_contig10497.547.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10497.547.1
Unique NamemRNA_D-dudresnayi_contig10497.547.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10497.547.1 vs. uniprot
Match: D8LDY4_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY4_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 6.960e-103
Identity = 226/343 (65.89%), Postives = 256/343 (74.64%), Query Frame = 1
Query:    1 ASRERFDELVGKIGELEQEKSSLITKMNGATTPNGSAKESS--GRSKKGSASAEALRERLKGVESQLASLGAQKKKQERAVMLLQRESKKCEDLQEGLAQLKRQKVVLQKRQQEAAKRHRGYEQRMSREIQAMRKKNNRDLRSMSKMELEVRRQKAAAARKTTQVGRMGDKLKKTEEHLLRLLALRKQQGVVERARARGAARGRAAGSTNKSGGEAGNA---------------------RADKAVAAAASEASDARVTAAKHLLDRSVASRVEHAALRQAFSAKVHAYDEQTSIQVGNIGMLRGYRAQLKEVK--ISAGDGGGGDSRL-AGAENVDPGSKRG 951
            A++ERFD LVGKIG+LEQEK +L+  M  ATTPNGSAKESS          +AEALRERLKGVESQLASLGAQKKKQERAVMLL+RE+KKCEDLQEGL QLKRQKVVLQKRQQEAAKRHR YEQRMSREIQAMRKKN++DLRSMSKMELEVRRQKAA ARKT+QVG+MGDKLKKTEEHLLRLLALRKQQG  +RARARGA             G AG                                 +E  +ARV+AAKHLLD+++AS+VE A+LRQ FS K+ +YDE+TS QV NIGMLR YRAQL+E+K  +   + GGGD+   AGAENVDPG+ RG
Sbjct:  521 AAKERFDMLVGKIGDLEQEKLTLLETMKNATTPNGSAKESSRGXXXXXXRGTAEALRERLKGVESQLASLGAQKKKQERAVMLLKREAKKCEDLQEGLGQLKRQKVVLQKRQQEAAKRHREYEQRMSREIQAMRKKNSKDLRSMSKMELEVRRQKAATARKTSQVGKMGDKLKKTEEHLLRLLALRKQQGTADRARARGA-------------GGAGRRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVGEARVSAAKHLLDQAIASKVERASLRQDFSNKIRSYDERTSQQVCNIGMLRDYRAQLRELKATVKQEEAGGGDAAGDAGAENVDPGATRG 850          
BLAST of mRNA_D-dudresnayi_contig10497.547.1 vs. uniprot
Match: A0A7S2QVI8_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVI8_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 3.700e-12
Identity = 58/183 (31.69%), Postives = 108/183 (59.02%), Query Frame = 1
Query:   13 RFDELVGKIGELEQEKSSLITKMNGATTPNGSAKESSGRSKKGSASAEALRERLKGVESQLASLGAQKKKQERAVMLLQRESKKCEDLQEGLAQLKRQKVVLQKRQQEAAKRHRGYEQRMSREIQAMRKKNNRDLRSMSKMELEVRRQKAAAARKTTQVGRMGDKLKKTEEHLLRLLALRKQQ 561
            ++++L+ ++  LEQEK  L  ++            + G SK       A++ +L  VE  LA   ++ +KQ++     +RE++K   ++  + +LK  +V L K+Q+E   RHR + +  +REIQ ++KK  +  ++++K+E E ++ K A  R+T+   ++ DKLK+TE HL+RLLA+RK++
Sbjct:  592 KYEKLLNEVSSLEQEKGELAEQLAKVEVD-----PTRGCSK-------AIKLKLDKVEESLARARSESRKQQQMYKSAEREAQKARAMERKIEELKLGRVNLMKKQKETIARHRAFTENKTREIQTLKKKERKQGKNLTKLETECKKHKKALDRRTSYCHKITDKLKQTEVHLMRLLAMRKRE 762          
BLAST of mRNA_D-dudresnayi_contig10497.547.1 vs. uniprot
Match: A0A7S2PLE1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PLE1_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.140e-11
Identity = 75/292 (25.68%), Postives = 156/292 (53.42%), Query Frame = 1
Query:    7 RERFDELVGKIGELEQEKSSLITKMNGATTPNGSAKESSGRSKKGSASAEALRERLKGVESQLASLGAQKKKQERAVMLLQRESKKCEDLQEGLAQLKRQKVVLQKRQQEAAKRHRGYEQRMSREIQAMRKKNNRDLRSMSKMELEVRRQKAAAARKTTQVGRMGDKLKKTEEHLLRLLALRKQQGVVERARARGAARGRAAGSTNKSGGEAGNARADKAVAAAASEASDARVTAAKHLLDRSVASRVEHAALRQAFSAKVHAYDEQTSIQVGNIGMLRGYRAQLKEVKISA 882
            +E+++ L+ ++  LE+EK+ L  ++  AT              KG + +  ++++L+ VE+ L+   ++ ++ +      ++E++KC  L+  +  LK+ K  L ++Q+EAA +H+ + +  +REIQA+++K+ ++ + ++K+E E R+ KA+  R+     +M  KLK+TE HL+RLLA+RK++ + +R + +    G    S  +          +KA A  +SE     V++ + LL++ V+ RV  A ++  + ++V  Y          + ML+  +  +      A
Sbjct:  617 KEKYELLMTEVQGLEKEKADLAIQLEHATVD----------PTKGCSVS--IKKKLEKVEASLSRARSETRRHQEMYRKAEQEAQKCRSLENKIYHLKQGKAALVRKQKEAAAKHKEFTEAKAREIQALKRKDRKNGKQVTKLEAECRQYKASLERRKEYGQKMAAKLKQTETHLMRLLAMRKRE-LHDRYKTKNKKNGVYRMSFCRPSISNEEVNTEKAFAEDSSE----EVSSIRFLLEKMVSDRVAQADVKMRYESRVEKYGTLMRSMTSEMKMLKKMKVDITNADTDA 891          
BLAST of mRNA_D-dudresnayi_contig10497.547.1 vs. uniprot
Match: A0A7S2UBH7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UBH7_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.440e-11
Identity = 58/182 (31.87%), Postives = 107/182 (58.79%), Query Frame = 1
Query:   13 RFDELVGKIGELEQEKSSLITKMNGATTPNGSAKESSGRSKKGSASAEALRERLKGVESQLASLGAQKKKQERAVMLLQRESKKCEDLQEGLAQLKRQKVVLQKRQQEAAKRHRGYEQRMSREIQAMRKKNNRDLRSMSKMELEVRRQKAAAARKTTQVGRMGDKLKKTEEHLLRLLALRKQ 558
            +++ L+G++  LE EK SL T++  A               KG ++A  ++++L+ VES L    ++ +K ++     ++E++K + L   + +LK+ KV L KRQ+EAA RHR + +  S+EIQ +++K  +  + +SK+  E  + K    R+     ++ +KLK+TE HL+RLLA++K+
Sbjct:   33 KYEILMGEVQSLEAEKISLATQLENAQID----------PTKGCSTA--IKKKLEKVESSLKWARSETRKHQQMYRKAEQEAQKSKMLDRKIIELKQGKVALIKRQKEAASRHRAFTEAKSKEIQTLKRKERKTGKQVSKLAAECNKHKMTIDRRNEYSNKLSEKLKQTESHLMRLLAMKKR 202          
BLAST of mRNA_D-dudresnayi_contig10497.547.1 vs. uniprot
Match: A0A448Z507_9STRA (Kinesin motor domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z507_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.250e-9
Identity = 74/283 (26.15%), Postives = 141/283 (49.82%), Query Frame = 1
Query:   13 RFDELVGKIGELEQEKSSLITKMNGATTPNGSAKESSGRSKKGSASAEALRERLKGVESQLASLGAQKKKQERAVMLLQRESKKCEDLQEGLAQLKRQKVVLQKRQQEAAKRHRGYEQRMSREIQAMRKKNNRDLRSMSKMELEVRRQKAAAARKTTQVGRMGDKLKKTEEHLLRLLALRKQQGVVERARARGAARGRAAGSTNKSGGEAGNARADKAVAAAASEASDARVTAAKHLLDRSVASRVEHAALRQAFSAKVHAYDEQTSIQVGNIGMLRGYRAQL 861
            +++EL+ ++ +LE EKS+L  +++ ATT             KG ++A  ++++L+ VE  L+    +K+  E        + +KC+ L+  +  LK  K+ LQK+Q+E A R+R   +  ++E+  +++K     + MSK+E E+  QK   +R+T    ++ DKLK TE HL++LLALR++     +  +   +  RA G  +K             +  +  + ++  +    +  DR V  +V+ A L+  +   V  Y       V  +  L+  RA++
Sbjct:  554 KYEELMEEVQQLENEKSNLAKQLDRATTD----------PTKGCSTA--IKKKLEKVEMSLSRARREKRYAED-------QERKCKVLERKVHDLKCAKLALQKKQKEDAVRYRKTTEAKTKELLVLKRKAKNADKRMSKLESEIILQKRTLSRRTEYCAKLSDKLKNTESHLVKLLALRQRDTADHKVSSMQRSSKRACGKESK-------------LKESYQKFTEEEMKTKNYXFDRMVLDKVKQARLKNKYEGLVATYSATMRKVVSEVKXLKEIRAEM 804          
BLAST of mRNA_D-dudresnayi_contig10497.547.1 vs. uniprot
Match: A0A7S4J1K6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J1K6_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 5.360e-9
Identity = 78/297 (26.26%), Postives = 155/297 (52.19%), Query Frame = 1
Query:   13 RFDELVGKIGELEQEKSSLITKMNGATTPNGSAKESSGRSKKGSASAEALRERLKGVESQLASLGAQKKKQERAVMLLQRESKKCEDLQEGLAQLKRQKVVLQKRQQEAAKRHRGYEQRMSREIQAMRKKNNRDLRSMSKMELEVRRQKAAAARKTTQVGRMGDKLKKTEEHLLRLLALRKQQGVVERARARGAARGRAAGSTNKSGGEAGNARADKAVAAAASEASDARVTAAKHLLDRSVASRVEHAALRQAFSAKVHAYDEQTSIQVGNIGMLRGYRAQLKEVKISAGDGGGGD 903
            +++ L+G++  LE EK+SL  +++ A               KG + A  ++++++ VE+ LA   ++ +K ++     ++E++KC+ L+  + +LK+ +V L K+Q+EA+ +H+ + +  +REIQA+++K  +  + +SK+E E R+ K    R+     ++         HL+ LLAL+K++     A  R     R A   N+S  E G A   +A A  + E     +++ K LL++ V+ RV ++ LR  +  +V  Y +           +R   A++K+++    DG  G+
Sbjct:  491 KYEVLMGEVQSLEAEKASLAAELDKAQID----------PTKGCSVA--IKKKMEKVEASLARARSETRKHQQMYRKAEQEAQKCKTLENRVKELKQGRVNLIKKQREASTKHKEFTEAKTREIQALKRKERKAGKQVSKLEAECRKYKGNLERQKQYALKLXXXXXXXXSHLMSLLALKKRKRQTAPATRR-----RQAPPVNESSNE-GKAAGTEAFAPMSGE-----ISSMKFLLEKMVSDRVANSRLRDQYGRRVADYSDH----------MRELAAEVKKLQKVRKDGASGE 754          
BLAST of mRNA_D-dudresnayi_contig10497.547.1 vs. uniprot
Match: A0A1Z5K712_FISSO (Kinesin family member 4/21/27 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K712_FISSO)

HSP 1 Score: 57.4 bits (137), Expect = 2.270e-5
Identity = 65/283 (22.97%), Postives = 138/283 (48.76%), Query Frame = 1
Query:    7 RERFDELVGKIGELEQEKSSLITKMNGATTPNGSAKESSGRSKKGSASAEALRERLKGVESQLASLGAQKKKQERAVMLLQRESKKCEDLQEGLAQLKRQKVVLQKRQQEAAKRHRGYEQRMSREIQAMRKKNNRDLRSMSKMELEVRRQKAAAARKTTQVGRMGDKLKKTEEHLLRLLALRKQQGVVERARARGAARGRAAGSTNKSGGEAGNARADKAVAAAASEASDARVTAAKHLLDRSVASRVEHAALRQAFSAKVHAYDEQTSIQVGNIGMLRGYRA 855
            ++++++L+ ++  LE EK+ L  ++  A            +S   +  + A++  L+ VE  LA    + +K  +     ++E +KC  L+  +++LK +   L ++Q+ +A + R Y +   REI A+++K     + MSK++ E++  +    ++     ++  KLK+TE HL++LLALRK++      R R A  G+   +             D  V    + A D  + + K L+DR V++ V     ++ + ++ + Y +   + V  +  L  +++
Sbjct:  524 KDQYEKLMVEVQHLETEKAQLADQLEKA------------KSDPSAGCSVAIKMNLEKVEQNLARARDETRKYRQMCKKAEQEQQKCLVLERKVSELKSKSAALVRKQKASAAQFRDYTESKQREIAALKRKEKATEKKMSKLQSEIQIHRRNLDKRQVFCNKLSSKLKETETHLMKLLALRKKE-----CRERNAKTGKQRATMVSK---------DANVQQGLAPADDEVLKSIKMLVDRVVSAAVTKECAKKKYQSRFNEYTQTMRLLVDQVKTLEEFKS 780          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10497.547.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LDY4_ECTSI6.960e-10365.89Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A7S2QVI8_9STRA3.700e-1231.69Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
A0A7S2PLE1_9STRA1.140e-1125.68Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S2UBH7_9STRA1.440e-1131.87Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A448Z507_9STRA2.250e-926.15Kinesin motor domain-containing protein n=1 Tax=Ps... [more]
A0A7S4J1K6_9STRA5.360e-926.26Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A1Z5K712_FISSO2.270e-522.97Kinesin family member 4/21/27 n=2 Tax=Fistulifera ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10497contigD-dudresnayi_contig10497:788..8798 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score348.6
Seed ortholog evalue3.2e-93
Seed eggNOG ortholog2880.D8LDY4
KEGG koko:K10395
EggNOG free text desc.microtubule motor activity
EggNOG OGsCOG5059@1,KOG0244@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-23_003320.1
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Hectar predicted targeting categoryother localisation
Exons7
Model size972
Cds size972
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927552.1397939-CDS-D-dudresnayi_contig10497:787..9641622927552.1397939-CDS-D-dudresnayi_contig10497:787..964Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10497 788..964 +
1690556803.9785247-CDS-D-dudresnayi_contig10497:787..9641690556803.9785247-CDS-D-dudresnayi_contig10497:787..964Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10497 788..964 +
1622927552.1563013-CDS-D-dudresnayi_contig10497:2869..30011622927552.1563013-CDS-D-dudresnayi_contig10497:2869..3001Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10497 2870..3001 +
1690556803.9876685-CDS-D-dudresnayi_contig10497:2869..30011690556803.9876685-CDS-D-dudresnayi_contig10497:2869..3001Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10497 2870..3001 +
1622927552.1728764-CDS-D-dudresnayi_contig10497:3558..36361622927552.1728764-CDS-D-dudresnayi_contig10497:3558..3636Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10497 3559..3636 +
1690556804.0014923-CDS-D-dudresnayi_contig10497:3558..36361690556804.0014923-CDS-D-dudresnayi_contig10497:3558..3636Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10497 3559..3636 +
1622927552.186629-CDS-D-dudresnayi_contig10497:4541..46401622927552.186629-CDS-D-dudresnayi_contig10497:4541..4640Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10497 4542..4640 +
1690556804.0098631-CDS-D-dudresnayi_contig10497:4541..46401690556804.0098631-CDS-D-dudresnayi_contig10497:4541..4640Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10497 4542..4640 +
1622927552.1986055-CDS-D-dudresnayi_contig10497:5639..58021622927552.1986055-CDS-D-dudresnayi_contig10497:5639..5802Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10497 5640..5802 +
1690556804.0188549-CDS-D-dudresnayi_contig10497:5639..58021690556804.0188549-CDS-D-dudresnayi_contig10497:5639..5802Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10497 5640..5802 +
1622927552.216039-CDS-D-dudresnayi_contig10497:6967..71371622927552.216039-CDS-D-dudresnayi_contig10497:6967..7137Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10497 6968..7137 +
1690556804.0269685-CDS-D-dudresnayi_contig10497:6967..71371690556804.0269685-CDS-D-dudresnayi_contig10497:6967..7137Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10497 6968..7137 +
1622927552.2319758-CDS-D-dudresnayi_contig10497:8645..87981622927552.2319758-CDS-D-dudresnayi_contig10497:8645..8798Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10497 8646..8798 +
1690556804.0353372-CDS-D-dudresnayi_contig10497:8645..87981690556804.0353372-CDS-D-dudresnayi_contig10497:8645..8798Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10497 8646..8798 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10497.547.1prot_D-dudresnayi_contig10497.547.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10497 788..8798 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10497.547.1

>prot_D-dudresnayi_contig10497.547.1 ID=prot_D-dudresnayi_contig10497.547.1|Name=mRNA_D-dudresnayi_contig10497.547.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=324bp
ASRERFDELVGKIGELEQEKSSLITKMNGATTPNGSAKESSGRSKKGSAS
AEALRERLKGVESQLASLGAQKKKQERAVMLLQRESKKCEDLQEGLAQLK
RQKVVLQKRQQEAAKRHRGYEQRMSREIQAMRKKNNRDLRSMSKMELEVR
RQKAAAARKTTQVGRMGDKLKKTEEHLLRLLALRKQQGVVERARARGAAR
GRAAGSTNKSGGEAGNARADKAVAAAASEASDARVTAAKHLLDRSVASRV
EHAALRQAFSAKVHAYDEQTSIQVGNIGMLRGYRAQLKEVKISAGDGGGG
DSRLAGAENVDPGSKRGSSGNGNS
back to top

mRNA from alignment at D-dudresnayi_contig10497:788..8798+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10497.547.1 ID=mRNA_D-dudresnayi_contig10497.547.1|Name=mRNA_D-dudresnayi_contig10497.547.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=8011bp|location=Sequence derived from alignment at D-dudresnayi_contig10497:788..8798+ (Desmarestia dudresnayi DdudBR16 monoicous)
GCTTCCAGGGAACGATTCGACGAGTTGGTGGGCAAGATTGGGGAGCTGGA ACAAGAGAAATCGTCGCTGATCACGAAGATGAACGGTGCCACAACTCCCA ACGGGTCTGCGAAGGAGTCTTCGGGAAGGAGCAAGAAGGGTTCCGCGTCT GCCGAGGCTCTGAGGGAACGGCTAAAGGTGCGGTCCGAGATATGGAGGCG TGTCCATCCGGTATCATTGTAGGAAATGCTGCCTGCTGCGGCATATGATT ATTTTCTTTTGTTTGTGGTTTTTAGTGTTTTTTTAGGTAGTGTGTGTACC ACTTACTCGAAAACAATAGTTGATATACACTGTGTACGAGATAAAACACA ACAATACGAGATAATACACAACAATGGTTGATATACGAGATAAAACTGTT CTTTTGTGTTGCTTCCGCGACGGTAAGGGTTAGCGGTAGAGTCGGTCCGC TCTGTGATCGTGCTGTAAATACGCGGTGTATATATCACCCATTTTTCGAA CTTGTGGTAAAACAACTCAGTAGTGCTTAGACGAAAACTATGGTTGAACC TACAAACTCTATATAAACAAATTCAAGGAGTGTTTTAGCCACACAACAGT GTCGATTCAAGAGCCACAGAGAGCAAAAATGACTTTTCCTCGTTTTCAGT GCCGAAGGCGTCTATTTTGGCCGCGCCAACTGTGCCGTAGAATTAATAGT ACCGTGGGTGGTTAAGGTTAGGGGTTAGGGTCGCGTTGGGTCGGGTTGGG TCGGCTCGGTATAAAATGAAATCAACAAAAAGAAGCTGTGTCAACCATAG TTTTCGTCTAACTGGTAAACGAGACTCAACACAACTCTGGGTTTTAAAGC CGGTGTTGTTGGTGTTGGTGTTGATGCCTTCACATTTTGAAGACAGGCAG TATTTTTTGCACACCTATCGGCAGGATCCTTACGGAAGATTTTTACTATG CTGTTATTACGGTCTGGTCGTTAGGGTAGGGCTGGTTGCCAGAAAGTGTT CCGAACTGCTGAACAGACCACGTTGATGCTATTATTAGTATAATAAAATG AACACCCTCTAGATCCATCCCGTCGAATGGGTGTGTAAAGGAGGTTCATG AAAGAGAGCGTCCTTTCTTCCCTACGACATTCACCTGCGTACTCAAGACC TGTTGCTGATTCTGCCGTTCCTTCGAGTAGAGAGAGCTACGAAATTTCGT CGTCGCAAGCTATCATATTAACGTGATGATGAGGAGCACCAGATTGCTTA CGGAACAAAAAGGCGAAATATGGTGCGTTTTGCTATTGTACCTGTCTTTA GAAGCTGTAGGTGTAGTTCTGTTTGCCCCCCGTTGTTGTTGTTGTTGTTG TTGACGGTTGTTGTGTGTTTCGGGCGCGATTTGTTGATCCTCGTGAGTGT GGCTGTGTGTTGTTTTTTGTCCAATTAAAAGGGGTGGTGTAATGGTCTAA TGGAGAGGGTGCTTGCCCCTGTTGGCGAAAGTTCGGGGTTCGATTCCCGG TGGTACTTTTCTGTGCCGTCTTTCGTCGTGGGAAACCAGAGAGCGCGAGT AAGCATAATTCGATGAAAGTCGACGAGGGAAGATACCGCAACATTCTTCT CGCTATAAAAATGTAGTAGGCACATACCGTAGCGGGAAGACGGGAGAAGC GCCTACTATGTGACCCCGGATCTGAATTACTAACAGAGATGGAGGCAGAG AAATAATAGAGCGTAGATAATAAAATGGGACGGGGAAAAAAACAAAACAA AAATAAAAACACCCTTGGGATTTTTTCAGAGGATTTTAGGATGGTGTACA CATACCCTTTCGTCCACCAAAACTACAGTTGATAAATCGAACACCCGCAT TCAGACATGAAACGACGAAGACGGGGACGCAAAAAGTGTCGTGAAAACGT TTCAAGGGCTGGCGTGTAGCAAGGAAGGAGAGAGCCTCCCGCCTCCCCCA CAGTGCCGTTGTTAGTGAGTAACTTGCTTTCCATTCCCTCATCGATTTGA GTGCAATGTGCTGACCCTGTTCATCACGCTTGTTTGTGGCGCTTACACCT ACGTATGTTTGTATGTATATGCGTTCGTGTAGGGTGTTGAGAGCCAGCTG GCTTCTCTCGGTGCTCAGAAGAAGAAGCAGGAGAGGGCTGTGATGCTGCT ACAGAGGGAGTCGAAAAAGTGCGAGGATCTGCAGGAAGGCCTTGCGCAGC TCAAGAGGCAGAAGGTGCTGCTTACTTACTTATTTTTTGTTTTTATCCTG CAGTGGATGGGTGCTTGCCGCAGAGGTGCCACCCGTCCGATTCGGACCCG GGTACCCCGCGGGTTTACCCACACGGGTCGGACCCGTTCACGGGTCCGGG TCCGACCTAAAACCCGCCGGGTATTCCGGGCCGAGTACTCCCCTGTCCCC CCTTGCGTCTTGGTGTGCATACTGCTTATTCCTGAGTGTACGCCGGTACT GCCCTCTTACTGTACAACCGTGTTGCCCCCCCTAGGGACCCATGCGTGTA TCCATGGCAAGACCCACAGAGGAAGGGGGACAACAGCTCTAGCTAGATGT ACCTGTTGTAGCTGGCGATCGGATATATCCCATTATCGACTTTTCTTATG GTCCTTTTTTTGGTTTTCATAGTTGTTGACTTATTTTGTTATGAGTTTCT TCCTCGAAAGCTCCGCATCCTCCCTTTTCCCGAGCACTTCGAAAGAGGTA TCGATCAGGAACCCGCTGTCCATAAACATTTGTGTGCTTTATTGCTTTCA TTGTTTTTTGTTCGTCATCAGGTGGTGCTGCAGAAGCGTCAGCAGGAAGC GGCCAAGCGGCACCGCGGGTACGAGCAGCGCATGTCAAGAGAGATTCAGG TGGGGCCTGCTTGTTCGTTTTTTGTTTTTTGCGCGTCCTCAGAATTATTA TGGATCGGTTTGTTTTGGGACTGGTTCGATTGTTGCTAATGGGGGCGTAT GTCATGTTCGTTGGTCTTGCAGTTTGTAGCAGTTTGTAGTTTCGCTCTAT CGTAGTGGGAGTCGAGGGAAGGAGGGAGGGAGTGTTATGAAGTTGCCTTG GCAGCTTTAAATGCGTCGGGTTTCCTAAAGACTTGATAAACTTCTCTACG TTTGTCTAGGGTATCTTAGCATTAGTCTACAGTTGTCTAGACGTCTTTGT ATTAGTGTGCCAGATAACTGGTTCGATGCCACACCTGTTCACTACCTTGT CGTCTGATCATCATGTAGTCTGTCTCTGATAGCGAGGGCCCGCTAGGGTT TTAGGCGGGCGGGAGTGCAAGCAAGGATTTACGAGTAATAAAGATAATAT GTCTTGTGGGTGCGTGTGAACGCATGAGGTATACCCCTGACGACCTGGTG AGACCATAGCTTCCTAACAGGAGACTGCTAAAAATCGTCTTTGCTATCCT GCGAAATCCGGTAGCGTTGTCAAGAGTTCGTACTGTTTCTTCCGTCCTAC GAGAAAGAGAGATCCGAAACTCCGCGGTCACAAGCTACTACTACTAATAC TAGCACCAAATCGATCACTAAACAAAAGAACGGGAGAATAAATAGAGTAT TACGAGAAACCCGTGGTAAGAAGTAAAGGAAACGCAGCAACGTAAGAATC ACAAGGGAGAACAGGAAACAGGTAGTAACAGAAGGACACAACTTCCTGAG ATTTGTATTTTTTTAGTTTTGGCCGAGTTGCGCGCTTGAAACGTGGTCCA AGCGCAGATGTAGACGTACGATGGATTCGGTTTGCTTCGCTTCGGTTGGC GCAGGCAATGCGCAAGAAAAACAACAGGGACCTCCGGTCGATGAGCAAGA TGGAGCTCGAGGTCCGCCGGCAAAAGGCTGCGGCGGCTAGGAAGACCACG CAAGTAAGGCAGGGGGGGGGGGGCGTATTCATTTGTAGCTTGCCTTAGTC AGTTGACCATGGACCACGCATCCCTTTCTGAGACGGAGCACCAATCCTAC TCTTGATAGAGTCACCTCCAACATTTGGGGACTCTCTTCGCTTTTGCCAA ATCTTACATAATAACTTTTTGCTTGTCTTTTGCCCTTTCTGTTTCTCCTT TAGAGAGAGAGGGGGGATGGGGGGGCGTGTGCTTTGCCGACGCAGGCGGG GGAGCTATATGTAGATGTTTGTTCATCCGGCGCAGAGAATGCTGTATCGC ATTGGGAGGAGGTTTTTTTTTTGTGGCTGAAAGGATGGGGTAAGGGCTTG GATTAGGGTTAGAGTTAGCTCTGTGTGCTACTAGTGTATGTCGGGAAGGG ACGTCCCCCGGATGCACCCCGCCCCCGCCCCCCCGGCTCGCAACGCTGTG TGGGGGCGCCACGACGTTCATTGATTTGGCGACGAGGGTCGGCCTAGCGT AGCCGGCCCAATTTATGTGTTTATGGCAAACAACCATGTAACCATGTACG GACCATCCCGCCTCGTCTTTGTGTCGCCTCGTTCCCCCCTTGCTCCGTTC AAGCTGTTTCGCAGCTGAGTGCTGTACGGATGAATATCAAATATGGTACA TAGCTGTTCTGTTGTATTTTGCGGTCTTGGTGGCATGCTGGAGGGTGTTG TTTTGGTGCGTGTGCGGTTGTGCTTTTGGGGAGGGTCTGAATGATGTACG GGTGGACATCAAAACATCACAGCTGTGGATGTTGTGCGTTTTGCTCTTGT TGGTGAAATATTAAATATTGCATGTTTTTTTTACGCGTGTCTTGCGTTTA TTTGGGGGTTCTGAATAACGGTACGGATGAATTATCAAACATCATAGATG TGGATGTTGTGCGTTTTGGTCTTGCTGGTGGCATATTGCATGGTGTTCTT TTAACGCGCGTGTGCTCGTGCGTTTGTGTGTGTTTGTTTGTTGGCGGGTT AGGTTGGCCGTATGGGCGACAAGCTGAAGAAGACGGAGGAGCATCTGTTG CGGCTGCTGGCGTTGAGGAAGCAGCAGGGCGTTGTGGAGCGTGCTAGGGC CCGCGGGGCGGCGAGAGGACGAGCGGCGGGTTCAACCAACAAGTCTGGAG GAGAAGCCGGCAACGGTCAGTCGGTCTTGCGTTATTTGTAGATACTACTA CCATAGGTCCTTTTTTTTTTTTTTGTTAACGGTCTTGCGTGATTTACAAT TGATAAGATACCTGGTACATGGGTCATTTTTTTTCTTCTTTTTTTTCTAC CGTTCGTTTGTTTATTGATAGGTTATACCAGGTATTTCTATCGCTTTTTT TCTATAGTTGGTACTCGAACTTCTCAGCTCAGCTCGCGAATGAAGGGCTA ATCGTGTACGGGGTTTCAGAGCTTGCCGTGGTAACAGGTGTTACGTTACG GTTATTACGGTATTTTTTTTTTTTTTTCACGTTTTATTTATTTTGGCTTT TATTTTCAAGTTTAACTTCCCGGCTCAGCTTGCAAGGGAGGGGCTAATCA CGTAAGGATTTTCTGAGCACGCCGTGGTCGCAAGTCTCCCACCACGCTTT CCCCCGCGGGGTGCTATTGCTTTGGATTTTTGTCAGTTTTCGTGTTTTGT GCGTGGGCATTTGGTTGTGGAATAACGGGGGCGCGGAGGGGGTTGATTTT TTGTTGTGGCGAGGGGGGGGGGTCAGGACTGCACATGATTCAAGCTGTTC GTGTGACGGGATTACCGTATGTAGCAGCTCAATGTCGTGGAATTATTGCT TGTGATGTTACGTTTATCGCGTATTGTAAGAGTTTTGTTTTGTGTGTTTG CCTCGTTTGTTGGCGGCGTTGTGGCTCTTGTGCTCTGCGGACACCTGAAG AGTCTCGGGTTTGTTTGTTTTCCCTTTCAAATCATGCGTCGTGGTGTGTT TTCGATTTTCTTGTCGTGATCAACTTTATCCACCCACCCACGCGTAGTCC CGGTAGGAGGGGGGGGGGGGGGGATCTGTCCGTTGTCTCAAACGTGTTTG TGCGGTGGTTAACATGTTTTCGTGTCCCGCAGACCTTACCTGTATCGAGC TCCACCAGTACCACATACAGTGTCATTTGTTTTTTTTTACTATTTTTATA ATTACGGATAAATCAGCCGTGACGTTCCAAACTGATTCGAGGGCCAGGAG AAATCGTCAACTTTCACTGTGTGATAGCTTGGGTTTTTGTGATATGATTT CAGCAAGCAACGAATCGATGTTGGTTGGTCGCGCACACACCTCCTGCCGT TTTGTATTTTGTTTTTGTGTATCGCCGCAGCGCGCGCAGATAAGGCGGTA GCGGCGGCGGCGTCGGAGGCGTCCGATGCTAGGGTTACCGCCGCGAAGCA TCTTCTGGATCGGAGCGTTGCGTCGAGGGTGGAGCACGCTGCGTTGAGGC AGGCGTTTAGCGCCAAGGTCCACGCGTACGATGAACAAACGTCGATTCAG GTGGGAGACACGGGACGGTACATTTTTACATGGTTACGGGGAGGTGTTAA TGCGGGACGGCACATTTTTGGACCATGTAAACGGGACGGTATATTTCACA TTGTTGCGGGAAGATAGTTTACGGGACGGCACCTTTTCTTTGGACTGTCC TGTCTGTCTTTTTGTGTCGTAACATCATCCGTGGCAAATCGATGAAAGAC GATCTGCGACGTGTGCGAATGCCGAACCCGTTGCGCGATATAGAATATAA GGCACGTGCCGAGGGAGTGGGGGGTAGGGGGGGGGGTGTACTCATACTCA TTTCATGTATGGCCGTAGTCGTATGACCATAGACCCTCGCATCCCTACAA TGCCGGGACAGAACACGTCGGGTTGTCACCGACCAGGCAGAGGGGGTCGG GAGGGGGGTGGGCGGGTAGACACGTGTCACCACGGCTTGCGCAGGATGCC GCCATTAGCGATGAGCTCTTGTGAGGAGGTTGAATTTACAAACTATTAGA AGGGATGTTTGGGATTCATTTAGTTTATTATGCTACATAGATAGGACGAA CGTGAGGTACGCAGTAGGCAGGTAGGAAATTTCCTAGAATAATCAAAACC CTACCCCAACCCACACACTGCAATGATAAAGAGAGTAAGAACCTTCCCGA AAGGTCTCTTCTAACGCTTTGTAATCTGAACCCCTCGTGAGCTCTGAGCG GCGAGGTTTAGAGTGAGGAGCAATCTAGATAATAGACCACTTGCAGTAAG GAAGAAAATAAAAGTCGAAAATCGTACTGGGCGGAAATCGCATGTTAAAA TACTTATTTTTTTTTGTCGTGTGATTTTCCCCCGGGGCGACTTTTTTCAT TATTGCGCGTGGTCTACGTATGTATGTAACACCCGTGCTGGGGAAGCGTG GGCGATAGGCTCTCGGCTAAGGCTTGCAAACCTTGTGAGTGTGTTCTGTG CGCGCCACACATGACCAGGGTGGCTATTGTTGTGGGGTTTTGAGCTTTAC AGCTCTGTCCACGAAAAGAGAGGCCATTGTGATACTAATAGTAGTATAAC CTTGAAACCATTTTTGCCCACTATGCGTCTTTTTTATTGTGTAGACCCGT TTTTTTTTTTTTTTTTTTTTTATCAGTCACTGTTTTTTCCCAAGTGGCGG GTGATATTAAATTAGTGGGGGGTATATTGAGTTTTTGTGGGGAGGGGGCG GTNNNNNNNNNATACTGCGTGGGGTTTGGTGTTGGTTGTTTTTTTTCCCT CTTTGCGTCTTTTTTATTGAGGAGGCCCTTTTTTTTTTTTTTTTTTTTGT ATATCAGTCACTGTTATCTCCCAAGTGGCGGATGATATGAAATCAGTGGG GAGTATATTGAGTTTTTGTGGAGAGGGGCCGGTGGCGTCGGTATTTCGGT TCACAAAAAAGGTGCCTACATTTGTGACCACGGGTCCGAGCGATCGGGCT AATGTGACGGAAATAATAGTAATTATTGTTGTATTTTTTTTCTGTTTTGC GGCATCAGGTGGGTAACATAGGTATGCTTCGAGGCTACCGGGCGCAGCTG AAGGAGGTGAAGATCTCTGCCGGCGACGGTGGCGGCGGGGATTCACGGCT GGCCGGCGCGGAAAACGTGGACCCCGGAAGTAAACGCGGCAGTTCGGGCA ACGGCAACAGC
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig10497:788..8798+

>mRNA_D-dudresnayi_contig10497.547.1 ID=mRNA_D-dudresnayi_contig10497.547.1|Name=mRNA_D-dudresnayi_contig10497.547.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1944bp|location=Sequence derived from alignment at D-dudresnayi_contig10497:788..8798+ (Desmarestia dudresnayi DdudBR16 monoicous)
GCTTCCAGGGAACGATTCGACGAGTTGGTGGGCAAGATTGGGGAGCTGGA
ACAAGAGAAATCGTCGCTGATCACGAAGATGAACGGTGCCACAACTCCCA
ACGGGTCTGCGAAGGAGTCTTCGGGAAGGAGCAAGAAGGGTTCCGCGTCT
GCCGAGGCTCTGAGGGAACGGCTAAAGGCTTCCAGGGAACGATTCGACGA
GTTGGTGGGCAAGATTGGGGAGCTGGAACAAGAGAAATCGTCGCTGATCA
CGAAGATGAACGGTGCCACAACTCCCAACGGGTCTGCGAAGGAGTCTTCG
GGAAGGAGCAAGAAGGGTTCCGCGTCTGCCGAGGCTCTGAGGGAACGGCT
AAAGGGTGTTGAGAGCCAGCTGGCTTCTCTCGGTGCTCAGAAGAAGAAGC
AGGAGAGGGCTGTGATGCTGCTACAGAGGGAGTCGAAAAAGTGCGAGGAT
CTGCAGGAAGGCCTTGCGCAGCTCAAGAGGCAGAAGGGTGTTGAGAGCCA
GCTGGCTTCTCTCGGTGCTCAGAAGAAGAAGCAGGAGAGGGCTGTGATGC
TGCTACAGAGGGAGTCGAAAAAGTGCGAGGATCTGCAGGAAGGCCTTGCG
CAGCTCAAGAGGCAGAAGGTGGTGCTGCAGAAGCGTCAGCAGGAAGCGGC
CAAGCGGCACCGCGGGTACGAGCAGCGCATGTCAAGAGAGATTCAGGTGG
TGCTGCAGAAGCGTCAGCAGGAAGCGGCCAAGCGGCACCGCGGGTACGAG
CAGCGCATGTCAAGAGAGATTCAGGCAATGCGCAAGAAAAACAACAGGGA
CCTCCGGTCGATGAGCAAGATGGAGCTCGAGGTCCGCCGGCAAAAGGCTG
CGGCGGCTAGGAAGACCACGCAAGCAATGCGCAAGAAAAACAACAGGGAC
CTCCGGTCGATGAGCAAGATGGAGCTCGAGGTCCGCCGGCAAAAGGCTGC
GGCGGCTAGGAAGACCACGCAAGTTGGCCGTATGGGCGACAAGCTGAAGA
AGACGGAGGAGCATCTGTTGCGGCTGCTGGCGTTGAGGAAGCAGCAGGGC
GTTGTGGAGCGTGCTAGGGCCCGCGGGGCGGCGAGAGGACGAGCGGCGGG
TTCAACCAACAAGTCTGGAGGAGAAGCCGGCAACGGTTGGCCGTATGGGC
GACAAGCTGAAGAAGACGGAGGAGCATCTGTTGCGGCTGCTGGCGTTGAG
GAAGCAGCAGGGCGTTGTGGAGCGTGCTAGGGCCCGCGGGGCGGCGAGAG
GACGAGCGGCGGGTTCAACCAACAAGTCTGGAGGAGAAGCCGGCAACGCG
CGCGCAGATAAGGCGGTAGCGGCGGCGGCGTCGGAGGCGTCCGATGCTAG
GGTTACCGCCGCGAAGCATCTTCTGGATCGGAGCGTTGCGTCGAGGGTGG
AGCACGCTGCGTTGAGGCAGGCGTTTAGCGCCAAGGTCCACGCGTACGAT
GAACAAACGTCGATTCAGCGCGCGCAGATAAGGCGGTAGCGGCGGCGGCG
TCGGAGGCGTCCGATGCTAGGGTTACCGCCGCGAAGCATCTTCTGGATCG
GAGCGTTGCGTCGAGGGTGGAGCACGCTGCGTTGAGGCAGGCGTTTAGCG
CCAAGGTCCACGCGTACGATGAACAAACGTCGATTCAGGTGGGTAACATA
GGTATGCTTCGAGGCTACCGGGCGCAGCTGAAGGAGGTGAAGATCTCTGC
CGGCGACGGTGGCGGCGGGGATTCACGGCTGGCCGGCGCGGAAAACGTGG
ACCCCGGAAGTAAACGCGGCAGTTCGGGCAACGGCAACAGCGTGGGTAAC
ATAGGTATGCTTCGAGGCTACCGGGCGCAGCTGAAGGAGGTGAAGATCTC
TGCCGGCGACGGTGGCGGCGGGGATTCACGGCTGGCCGGCGCGGAAAACG
TGGACCCCGGAAGTAAACGCGGCAGTTCGGGCAACGGCAACAGC
back to top