mRNA_D-dudresnayi_contig10491.542.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10491.542.1
Unique NamemRNA_D-dudresnayi_contig10491.542.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10491.542.1 vs. uniprot
Match: A0A6H5KLQ4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ4_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 7.020e-82
Identity = 260/768 (33.85%), Postives = 319/768 (41.54%), Query Frame = 1
Query:   58 SHRCVRLHTFEPEDRAYTSTPTKIGGHCLDHIRNGLT---------STFI-------------QSSSSRAPKDGRDHDGFTQVKPPT-LSPTFDPK-GRFGGL-CDVVLRLSPSPXXXXXXXXXXXATVVSFSSVRLQQAQEVQLSSSMLSQQWGVVCSPLCSQPRELPLDTDAWEQGEIVEHGPNWPCSSSMNPGDERGPSLVGPFLDRAHGQQHNXXXXXXXNAAAGRHTGALMAVLLAKL--VN-GGGRSLSAEGSVADAAE-VARARSELRKCVVAQVDAASFVASHDVAATSDRNNIVQANRVKGGLPENACMV---AWQARLDQTPSYSKLRRYSFVRELGRGAHGTVVLVRKKSADK---------------------------------------------NNRP-GRLRVLKESHFLTEAVNEARLLLL---------------------ADGRGARAEMGEEDGPLGGDELVGAANGWNATVSKRRLVETVGASWGAGDSRPQNETTVATRDRGYRT----GGVVQLHDFFVETLGHRSLAFLELEYCDGGDLHGLMLGEAEDVNGWRQRGAEG----AVESVGAVWSVRGAI-----------------------------------------------------------------------------GLPVAQIGRLALGVCEGVQQLHEQGVIHRDLKPANVLLTKVGEVRIADLGVSTHLQPSRPLTESGAGTIPFMAPEVRKFLLGSKVAYS 1809
            SHR VRLHTFEPEDR YTSTPTKIGGHCLDH+RNG T         S  +             Q +SSR   DG       + +P    S T D   GRFGGL   +VLRL  +             T+  F    L   ++   S     Q                      W  GE  E  P                       D A  +             A  H+GAL+A+LL++L  VN G G +     + A AA  + R  S +   V       + +A+ +V      ++  + +                AW+AR+D  P  S+L+RY FVRELG G+HGT++LVRK+                                                 + +P G LRVLKESHFL EAVNEARLLL                        G G   +M    G  GG E  G +            V+ V              TT A RD G R     G VV+LHDFFVET+GHRSLAFLELEYC+GGDL  L+LG      G    GAE     A  +  A  +V GA+                                                                             GLP A+I R+ALG+CEG+Q+LHE+G++HRDLKPANVLLTK G VR+ADLGVST L PSRPLTE+ AGTIPFMAPEVRK+LLGSKVAYS
Sbjct:    9 SHRGVRLHTFEPEDRGYTSTPTKIGGHCLDHVRNGFTVIQQLRNKSSASVLTCSSGSSRNGQGQQASSRDSGDGEHEPAAMEGRPAAAFSTTLDTSMGRFGGLSAGLVLRLGAADFAPPRHRLYP--TLAEFPPDTLALRRDA--SGGFSCQXXXXXXXXXXXXXXXXXXXXXKWHAGESDEGEPXXXXXXXXXXXXXX---XXXXXXDDAREEIRAVPYRDMATTVAAGHSGALVAILLSRLAAVNPGDGYTGDTPAAAAAAAGGLVRDNSRVDLGVAQPGSTTALIATDEVPRRPPADSAAREHGXXXXXXXXXXXXXSWAWKARVDPLPVSSRLKRYDFVRELGSGSHGTLLLVRKRPLSAAAISGSGGALXXXXXXXXXXXXXXXXXXXXXXLNYGSVGSSGGTCSFQPVGSLRVLKESHFLPEAVNEARLLLXXXXXXXXXXXXXXXXXXXCATGSGFGYERQMAGGSGDAGGPETYGGS------------VDDVVV------------TTTAARDGGARENRQRGEVVKLHDFFVETVGHRSLAFLELEYCEGGDLASLILGNR--AGGGSTAGAENSASTATPTATAAPAVGGALRDFAYRSPAQPLEGLAMTVAREEGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAVGQDARAPLAGLPAARIVRVALGLCEGLQRLHERGILHRDLKPANVLLTKTGAVRVADLGVSTRLDPSRPLTENAAGTIPFMAPEVRKYLLGSKVAYS 743          
BLAST of mRNA_D-dudresnayi_contig10491.542.1 vs. uniprot
Match: D8LSH9_ECTSI (Protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH9_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 3.120e-67
Identity = 198/522 (37.93%), Postives = 247/522 (47.32%), Query Frame = 1
Query:  661 AAGRHTGALMAVLLAKL--VNGGGR---SLSAEGSVADAAEVARARSELRKCVVAQVDAASFVASHDVAATSDRNNIVQANRVKGGLPENACMVAWQARLDQTPSYSKLRRYSFVRELGRGAHGTVVLVRKK----------------------SADKNNRPG------------------------RLRVLKESHFLTEAVNEARLLLLA---------------DGRGARAEMGEEDGPLGGDELVGAANGWNATVSKRRLVETVGASWGAGDSRPQNETTVATRD----RGYRTGGVVQLHDFFVETLGHRSLAFLELEYCDGGDLHGLMLG---------------------------------------------------EAEDVNGW-------------RQRGAEG-AVESVGAVWSVRGA--IGLPVAQIGRLALGVCEGVQQLHEQGVIHRDLKPANVLLTKVGEVRIADLGVSTHLQPSRPLTESGAGTIPFMAPEVRKFLLGSKVAYSGE 1815
            AA  H+GALMA+LL++L  VN G        A         +AR  S +   V     A + +A+ +V                     ++   AW+AR+D  P  S+L+RY FVRELG G+HGT++LVRK+                      +  + +R G                         LRVLKESHFL EAVNEARLLLLA                G G   +M        G E+ G +            V+T       GD      T  A RD     G++ G VV+LHDFFVET+G RSLAFLELEYC+GGDL  L+LG                                                   E E+  G              R  GA+G A  +V AV     A   GLP A+IGR+ALG+CEG+Q+LHE+G++HRDLKPAN+LLTK G VR+ADLGVST L PSRPLTE+ AGTIPFMAPEVRK+LLGSKVAYSG+
Sbjct:    5 AATGHSGALMAILLSRLAAVNPGDAYTGDTPAAAXXXXXGGLARDNSSVGLGVAQPGSATALIATDEVLRRPPXXXXXXXXXXXXXXXXSSW--AWKARVDSLPVSSRLKRYDFVRELGSGSHGTLLLVRKRPLSAAASSGSGGTLGANSSHAGAGRRRSRGGTGGRGLTHGSIGSSGGTCSFQPGGNLRVLKESHFLPEAVNEARLLLLAGXXXXXXXXTACATGSGFGYERQMXXXXXXXXGPEIYGGS------------VDT-------GDDIVA--TATAVRDGGAIEGHQRGEVVKLHDFFVETVGDRSLAFLELEYCEGGDLASLILGSRAGGGSTAXXXXXXXXXXXXXXXXXAGGGALRDFACRSRAQPLEGLATAAEREEGTGGGGGNAGDFLSGGRRSLGADGTAAVAVAAVGQDARAPLSGLPAARIGRVALGLCEGLQRLHERGILHRDLKPANILLTKNGAVRVADLGVSTRLDPSRPLTENAAGTIPFMAPEVRKYLLGSKVAYSGK 503          
BLAST of mRNA_D-dudresnayi_contig10491.542.1 vs. uniprot
Match: G4YI10_PHYSP (Protein kinase domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YI10_PHYSP)

HSP 1 Score: 119 bits (298), Expect = 1.650e-24
Identity = 65/172 (37.79%), Postives = 98/172 (56.98%), Query Frame = 1
Query: 1300 NETTVATRDRGYRTGGVVQLHDFFVETLGHRSLAFLELEYCDGGDLHGLMLGEAEDVNGWRQRGAEGAVESVGAVWSVRGAIGLPVAQIGRLALGVCEGVQQLHEQGVIHRDLKPANVLLTKVGEVRIADLGVSTHLQPSRPLTESGAGTIPFMAPEVRKFLLGSKVAYSGE 1815
            NE ++ +R    R+  VVQ+  +F+E +GHR  A++E+E+CDGGDL G++               +G +E                 +   +   +C G++++H  G++HRDLKP NVLLT  G  +IAD GVST+L+ S  LT   AGT+ FMAPEVR++ LG  V+Y  +
Sbjct:  451 NEISILSR---VRSPHVVQIQQYFIEEIGHRHFAYIEMEFCDGGDLRGVLE-------------TKGRLEG---------------DEFDSMFRQLCLGLKEIHRHGIVHRDLKPGNVLLTSEGTTKIADFGVSTYLE-SDLLTHHAAGTLAFMAPEVRRYFLGEVVSYDAK 590          
BLAST of mRNA_D-dudresnayi_contig10491.542.1 vs. uniprot
Match: W2QAZ0_PHYPN (Protein kinase domain-containing protein n=16 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QAZ0_PHYPN)

HSP 1 Score: 117 bits (294), Expect = 4.600e-24
Identity = 65/172 (37.79%), Postives = 97/172 (56.40%), Query Frame = 1
Query: 1300 NETTVATRDRGYRTGGVVQLHDFFVETLGHRSLAFLELEYCDGGDLHGLMLGEAEDVNGWRQRGAEGAVESVGAVWSVRGAIGLPVAQIGRLALGVCEGVQQLHEQGVIHRDLKPANVLLTKVGEVRIADLGVSTHLQPSRPLTESGAGTIPFMAPEVRKFLLGSKVAYSGE 1815
            NE ++ +R    R+  VVQ+  +F+E +GHR  A++E+EYCDGGDL  ++               +G +E                 +   +   +C G++++H  G++HRDLKP NVLLT  G  +IAD GVST+L+ S  LT   AGT+ FMAPEVR++ LG  V+Y  +
Sbjct:  447 NEISILSR---VRSPHVVQIQQYFIEEIGHRHFAYIEMEYCDGGDLREMLE-------------KKGRLEG---------------DEFDSMFRQLCLGLKEIHRHGIVHRDLKPGNVLLTSDGSTKIADFGVSTYLE-SDLLTHHAAGTLAFMAPEVRRYFLGEVVSYDAK 586          
BLAST of mRNA_D-dudresnayi_contig10491.542.1 vs. uniprot
Match: W2Q964_PHYPN (Protein kinase domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2Q964_PHYPN)

HSP 1 Score: 117 bits (294), Expect = 5.140e-24
Identity = 65/172 (37.79%), Postives = 97/172 (56.40%), Query Frame = 1
Query: 1300 NETTVATRDRGYRTGGVVQLHDFFVETLGHRSLAFLELEYCDGGDLHGLMLGEAEDVNGWRQRGAEGAVESVGAVWSVRGAIGLPVAQIGRLALGVCEGVQQLHEQGVIHRDLKPANVLLTKVGEVRIADLGVSTHLQPSRPLTESGAGTIPFMAPEVRKFLLGSKVAYSGE 1815
            NE ++ +R    R+  VVQ+  +F+E +GHR  A++E+EYCDGGDL  ++               +G +E                 +   +   +C G++++H  G++HRDLKP NVLLT  G  +IAD GVST+L+ S  LT   AGT+ FMAPEVR++ LG  V+Y  +
Sbjct:  447 NEISILSR---VRSPHVVQIQQYFIEEIGHRHFAYIEMEYCDGGDLREMLE-------------KKGRLEG---------------DEFDSMFRQLCLGLKEIHRHGIVHRDLKPGNVLLTSDGSTKIADFGVSTYLE-SDLLTHHAAGTLAFMAPEVRRYFLGEVVSYDAK 586          
BLAST of mRNA_D-dudresnayi_contig10491.542.1 vs. uniprot
Match: H3GSM4_PHYRM (Protein kinase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSM4_PHYRM)

HSP 1 Score: 116 bits (290), Expect = 1.560e-23
Identity = 65/172 (37.79%), Postives = 96/172 (55.81%), Query Frame = 1
Query: 1300 NETTVATRDRGYRTGGVVQLHDFFVETLGHRSLAFLELEYCDGGDLHGLMLGEAEDVNGWRQRGAEGAVESVGAVWSVRGAIGLPVAQIGRLALGVCEGVQQLHEQGVIHRDLKPANVLLTKVGEVRIADLGVSTHLQPSRPLTESGAGTIPFMAPEVRKFLLGSKVAYSGE 1815
            NE ++ +R     +  VVQ+  +F+E +GHR  A++E+EYCDGGDL  ++               +G +E  G                  +   +C G++++H  G++HRDLKP NVLLT  G  +IAD GVST+L+ S  LT   AGT+ FMAPEVR++ LG  V+Y  +
Sbjct:  436 NEISILSR---VHSPHVVQIQQYFIEEIGHRHFAYIEMEYCDGGDLRRMLE-------------TKGRLEGDG---------------FDSMFHQLCLGLKEIHRHGIVHRDLKPGNVLLTSDGTTKIADFGVSTYLE-SDLLTHHAAGTLAFMAPEVRRYFLGEVVSYDAK 575          
BLAST of mRNA_D-dudresnayi_contig10491.542.1 vs. uniprot
Match: A0A2P4YVN6_9STRA (Protein Kinase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YVN6_9STRA)

HSP 1 Score: 114 bits (285), Expect = 6.550e-23
Identity = 64/172 (37.21%), Postives = 95/172 (55.23%), Query Frame = 1
Query: 1300 NETTVATRDRGYRTGGVVQLHDFFVETLGHRSLAFLELEYCDGGDLHGLMLGEAEDVNGWRQRGAEGAVESVGAVWSVRGAIGLPVAQIGRLALGVCEGVQQLHEQGVIHRDLKPANVLLTKVGEVRIADLGVSTHLQPSRPLTESGAGTIPFMAPEVRKFLLGSKVAYSGE 1815
            NE ++ +R    R+  VVQ+  +F+E +GHR  A++E+EYCDGGDL  ++               +G +E                     +   +C G++++H  G++HRDLKP NVLL   G  +IAD GVST+L+ S  LT   AGT+ FMAPEVR++ LG  V+Y  +
Sbjct:  436 NEISILSR---VRSPHVVQIQRYFIEEIGHRHFAYIEMEYCDGGDLRDMLE-------------TKGRLEG---------------DDFDSMFHQLCLGLKEIHRHGIVHRDLKPGNVLLMSDGTTKIADFGVSTYLE-SDLLTHHAAGTLAFMAPEVRRYFLGEDVSYDSK 575          
BLAST of mRNA_D-dudresnayi_contig10491.542.1 vs. uniprot
Match: A0A3M6VMN7_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VMN7_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.230e-22
Identity = 64/176 (36.36%), Postives = 95/176 (53.98%), Query Frame = 1
Query: 1288 SRPQNETTVATRDRGYRTGGVVQLHDFFVETLGHRSLAFLELEYCDGGDLHGLMLGEAEDVNGWRQRGAEGAVESVGAVWSVRGAIGLPVAQIGRLALGVCEGVQQLHEQGVIHRDLKPANVLLTKVGEVRIADLGVSTHLQPSRPLTESGAGTIPFMAPEVRKFLLGSKVAYSGE 1815
            S   NE ++ +R    R+  VVQ+  +F+E +GHR   ++E+EYCDGGDL  ++           ++G                   L       +   +C G++++H  G++HRDLKP NVLL   G  +IAD GVST+L+ S  LT   AGT+ FMAPEVR++ LG  V+Y  +
Sbjct:  451 SEAANEISMLSR---VRSPHVVQIQQYFIEEIGHRHFVYIEMEYCDGGDLQQML----------EEKGR------------------LEADTFDSMFRQLCLGLKEIHRHGIVHRDLKPGNVLLLSDGTTKIADFGVSTYLE-SDLLTHHAAGTLAFMAPEVRRYFLGEVVSYDSK 594          
BLAST of mRNA_D-dudresnayi_contig10491.542.1 vs. uniprot
Match: W4H4R7_9STRA (Serine/threonine protein kinase n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4R7_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.880e-22
Identity = 90/294 (30.61%), Postives = 131/294 (44.56%), Query Frame = 1
Query:  931 WQARLDQTPSYSKLRRYSFVRELGRGAHGTVVLVRKKSADKNNRPGRLRVLKESHFLTEAVNEARLLLLADGRGARAEMGEEDGPLGGDELVGAANGWNATVSKR--RLVETVGASWGAGDSRPQNETTVATRDRGYRTGGVVQLHDFFVETLGHRSLAFLELEYCDGGDLHGLMLGEAEDVNGWRQRGAEGAVESVGAVWSVRGAIGLPVAQIGRLALGVCEGVQQLHEQGVIHRDLKPANVLLTKVGEVRIADLGVSTHLQPSRPLTESGAGTIPFMAPEVRKFLLGSKVAY 1806
            W++R+      SKL RY +V  LG+G    V+L+RK S+ +                           + DG  A A M                      V K   +L E +            NE ++ ++   ++   VV+LH +F+E +GH   A+LELEYCD G+L   +                          ++ G +  P     R+ L +C G+ ++H   V+HRDLKPAN+LLT  G V+I+D GVST L  S  +T   AGT+ FMAPEVR++ LG  VAY
Sbjct:  279 WRSRVQMVLEPSKLLRYEYVHSLGKGNFSEVMLMRKLSSSR---------------------------VPDGDNAAASMA-------------------LCVLKESDKLQEAM------------NEVSLLSK---FQNPHVVRLHRYFIEQVGHLHYAYLELEYCDAGNLDEYV--------------------------ALHGKV--PHDMFTRIMLQLCSGLAEVHRHHVVHRDLKPANLLLTSDGLVKISDFGVSTCLD-SALVTRHAAGTMSFMAPEVRQYFLGDSVAY 482          
BLAST of mRNA_D-dudresnayi_contig10491.542.1 vs. uniprot
Match: A0A835YSX4_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSX4_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.170e-22
Identity = 68/184 (36.96%), Postives = 94/184 (51.09%), Query Frame = 1
Query: 1330 GYRTGGVVQLHDFFVETLGHRSLAFLELEYCDGGDLHGLMLGEAEDVNGWRQRGAEGAVESVGAVWSVRGAIGLPVAQIGRLALGVCEGVQQLHEQGVIHRDLKPANVLLTKVGE-------------------------VRIADLGVSTHLQPSRPLTESGAGTIPFMAPEVRKFLLGSKVAY 1806
            G +  GVV LHDFF+ TL H+ +A+LELEYC  GD+  L+          +QRG                   L   +I  ++ G+CEG++QLH   +IHRD+KP N+LL                              V++ADLGV + L  + P T + AGT+P+MAPEVRK+LLG+ V Y
Sbjct:  324 GNKGHGVVTLHDFFMLTLAHKRVAYLELEYCGYGDVAALL----------QQRGHMKP---------------LSAREIATISAGICEGLRQLHACDIIHRDIKPGNILLQHSSPTIASXXXXXXXXXXXQAAEVPASVVVKVADLGVGSRLSAAHPHTVNAAGTMPYMAPEVRKYLLGATVRY 482          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10491.542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLQ4_9PHAE7.020e-8233.85Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LSH9_ECTSI3.120e-6737.93Protein kinase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
G4YI10_PHYSP1.650e-2437.79Protein kinase domain-containing protein n=4 Tax=P... [more]
W2QAZ0_PHYPN4.600e-2437.79Protein kinase domain-containing protein n=16 Tax=... [more]
W2Q964_PHYPN5.140e-2437.79Protein kinase domain-containing protein n=13 Tax=... [more]
H3GSM4_PHYRM1.560e-2337.79Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A2P4YVN6_9STRA6.550e-2337.21Protein Kinase n=1 Tax=Phytophthora palmivora var.... [more]
A0A3M6VMN7_9STRA1.230e-2236.36Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
W4H4R7_9STRA1.880e-2230.61Serine/threonine protein kinase n=6 Tax=Aphanomyce... [more]
A0A835YSX4_9STRA2.170e-2236.96Kinase-like domain-containing protein n=1 Tax=Trib... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10491contigD-dudresnayi_contig10491:6831..10013 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score134.0
Seed ortholog evalue2.3e-28
Seed eggNOG ortholog36331.EPrPI00000022977
EggNOG free text desc.Ring finger
EggNOG OGs1MCCZ@121069,KOG0595@1,KOG0595@2759
Ec32 ortholog descriptionprotein kinase
Ec32 orthologEc-09_001700.1
COG Functional cat.T
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size1817
Cds size1815
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10491.542.1prot_D-dudresnayi_contig10491.542.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10491 6831..10013 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927551.670135-CDS-D-dudresnayi_contig10491:6830..76071622927551.670135-CDS-D-dudresnayi_contig10491:6830..7607Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10491 6831..7607 +
1690556803.8225737-CDS-D-dudresnayi_contig10491:6830..76071690556803.8225737-CDS-D-dudresnayi_contig10491:6830..7607Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10491 6831..7607 +
1622927551.6848118-CDS-D-dudresnayi_contig10491:7652..82311622927551.6848118-CDS-D-dudresnayi_contig10491:7652..8231Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10491 7653..8231 +
1690556803.8333786-CDS-D-dudresnayi_contig10491:7652..82311690556803.8333786-CDS-D-dudresnayi_contig10491:7652..8231Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10491 7653..8231 +
1622927551.699292-CDS-D-dudresnayi_contig10491:8753..90111622927551.699292-CDS-D-dudresnayi_contig10491:8753..9011Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10491 8754..9011 +
1690556803.841967-CDS-D-dudresnayi_contig10491:8753..90111690556803.841967-CDS-D-dudresnayi_contig10491:8753..9011Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10491 8754..9011 +
1622927551.715453-CDS-D-dudresnayi_contig10491:9812..100131622927551.715453-CDS-D-dudresnayi_contig10491:9812..10013Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10491 9813..10013 +
1690556803.8503711-CDS-D-dudresnayi_contig10491:9812..100131690556803.8503711-CDS-D-dudresnayi_contig10491:9812..10013Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10491 9813..10013 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10491.542.1

>prot_D-dudresnayi_contig10491.542.1 ID=prot_D-dudresnayi_contig10491.542.1|Name=mRNA_D-dudresnayi_contig10491.542.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=605bp
ITSRLGSSRAPNTMQVLLCSHRCVRLHTFEPEDRAYTSTPTKIGGHCLDH
IRNGLTSTFIQSSSSRAPKDGRDHDGFTQVKPPTLSPTFDPKGRFGGLCD
VVLRLSPSPPTPPPPPPPLPATVVSFSSVRLQQAQEVQLSSSMLSQQWGV
VCSPLCSQPRELPLDTDAWEQGEIVEHGPNWPCSSSMNPGDERGPSLVGP
FLDRAHGQQHNNNGGGVVNAAAGRHTGALMAVLLAKLVNGGGRSLSAEGS
VADAAEVARARSELRKCVVAQVDAASFVASHDVAATSDRNNIVQANRVKG
GLPENACMVAWQARLDQTPSYSKLRRYSFVRELGRGAHGTVVLVRKKSAD
KNNRPGRLRVLKESHFLTEAVNEARLLLLADGRGARAEMGEEDGPLGGDE
LVGAANGWNATVSKRRLVETVGASWGAGDSRPQNETTVATRDRGYRTGGV
VQLHDFFVETLGHRSLAFLELEYCDGGDLHGLMLGEAEDVNGWRQRGAEG
AVESVGAVWSVRGAIGLPVAQIGRLALGVCEGVQQLHEQGVIHRDLKPAN
VLLTKVGEVRIADLGVSTHLQPSRPLTESGAGTIPFMAPEVRKFLLGSKV
AYSGE
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mRNA from alignment at D-dudresnayi_contig10491:6831..10013+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10491.542.1 ID=mRNA_D-dudresnayi_contig10491.542.1|Name=mRNA_D-dudresnayi_contig10491.542.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=3183bp|location=Sequence derived from alignment at D-dudresnayi_contig10491:6831..10013+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATTACGTCGCGTCTGGGCTCCTCCAGGGCCCCAAACACAATGCAGGTGCT ACTGTGCAGTCACCGATGCGTCCGGTTGCATACCTTTGAGCCCGAAGATA GAGCATACACGTCCACGCCGACTAAGATTGGCGGCCACTGCCTCGACCAC ATCCGAAATGGACTCACCAGCACGTTTATCCAATCATCATCATCTCGTGC GCCGAAAGACGGCAGAGATCATGATGGTTTCACTCAAGTCAAACCTCCCA CATTATCGCCAACGTTTGATCCGAAGGGTAGGTTCGGGGGGTTGTGCGAC GTGGTCTTGAGGCTATCGCCTTCTCCTCCTACTCCTCCTCCTCCTCCTCC TCCTCTTCCTGCTACAGTAGTCTCCTTTTCTTCGGTTCGGCTTCAGCAGG CGCAGGAAGTACAACTTTCTTCTTCAATGTTGTCACAACAGTGGGGGGTT GTATGTTCTCCGTTGTGCTCGCAACCCAGGGAGCTTCCCCTGGACACCGA TGCGTGGGAGCAGGGAGAAATTGTTGAGCATGGACCAAACTGGCCATGCT CAAGCTCAATGAATCCGGGTGATGAGCGTGGTCCTTCCTTAGTAGGTCCC TTTTTGGACCGGGCACACGGCCAACAACACAACAACAACGGTGGTGGTGT GGTCAACGCCGCGGCTGGTCGGCACACCGGCGCGCTCATGGCGGTCTTGC TGGCAAAGCTCGTGAATGGGGGTGGGAGGAGCTTGAGCGCGGAGGGAAGC GTTGCTGACGCTGCTGAGGTTGCTCGCGTCGATGACGAAACGACGAGATC GATCACTCCAGCTTCGTTGGAGGCGCGCTCCGAGCTCCGCAAGTGTGTTG TTGCCCAAGTTGATGCCGCTTCTTTCGTGGCATCGCACGACGTGGCCGCC ACGAGCGACCGCAACAACATCGTCCAGGCCAATCGCGTCAAGGGCGGGCT GCCGGAAAATGCCTGCATGGTGGCGTGGCAAGCGCGTCTAGATCAAACCC CGAGCTATTCCAAGCTGCGACGGTACAGCTTCGTGCGCGAGCTGGGCAGG GGCGCGCATGGCACCGTCGTGCTCGTCCGAAAAAAATCGGCCGACAAGAA CAATCGCCCTGGACGTTTGCGAGTCCTGAAGGAGAGTCATTTTTTGACGG AGGCTGTCAACGAGGCGCGCCTGTTGCTGCTGGCAGATGGGCGCGGTGCG CGGGCAGAGATGGGCGAGGAGGATGGGCCACTTGGTGGTGATGAGTTGGT AGGCGCTGCTAACGGGTGGAATGCTACTGTTTCGAAGCGGCGGTTGGTGG AGACTGTCGGAGCGTCGTGGGGTGCCGGGGATAGCAGGCCCCAGAACGAG ACTACTGTCGCGACTAGGGACCGGGGCTACCGAACAGGAGGGGTTGTCCA GGTGATGCGCGTCTTATCATGTTTCATAATTTTGGTTACCAATAGTGATA CTACCAAACGTTGTACATTGCGGTGTGAGGGGTGTCTCGGTTGGAGTGCT TTAACACGATTCAAAATGCATTGTTCGGCGCGCCGTAGGCCTTTCTGCAA AGCTCGATGCAGAGTAGTCGCCGTGGTAACGGTGGTCAGGCGACTGGGCC TCCCTTCTCAGCGATTCGAACCACTAGACCGCCTCGTTTTACTGCCATTT CGAACCTATTATGCTGGTAGTATCATACATAGATCAGGCAGGCAGCAGCG TGAAAAGTGGAAAGGCCGCACTGCCTGTGTATCGTCTTAAGCACCAAGAG GTGCTGGTTGTGTTGTTCCAACCTTGGGTCTTGCCGGCACAGATTAACTA ACGACACGTCTCTCTCTCTCTGCCGCCCTCTTCTTTCTCTGCGGGCATTT GTGCCTCACCGTTCCTCGATTCCAAACAATCGATGCGACGACGGCTGGCG CCCGCGTTCACATGGCAATACAGTTGCACGACTTCTTCGTGGAGACACTG GGCCACCGCTCCTTGGCCTTTTTGGAGCTAGAGTACTGCGACGGCGGAGA CCTTCACGGGCTTATGCTCGGCGAGGCCGAAGACGTGAACGGGTGGAGAC AACGAGGGGCAGAGGGGGCGGTGGAGAGCGTGGGGGCTGTCTGGAGTGTG CGAGGAGCGATTGGACTTCCAGTGGCGCAGATAGGTAGATTGGCGCTAGG AGTGTGCGAGGGGGTGCAGCAGCTTCACGAGGTGTGCACATGTAGACGTT ACTTTACTCTACTTTACTCCGGAGTAGGTAGTTCTTTGTTTTCGGGGATT GCTGCGGCGGATGACCTATCATACGTAGAGCTCTATATTATCACATTTGT AAGTTTTTTGTTTTTGTTTTGGCGGAATGTGCTCCGGACTGAAAGCCGAG CGCACACCTGTCCTCCAATCGTATGGTTGTTTTCGCGTTTTGACCGGGTA CTACTAGTCGTTATCATTTTGTGGGAAGATGCGGGTGAGGAGTACCGTAT AGTGATCCGTGTTCCGATTACGTGTGTGTTTCCACGACTGTAAATGATTT GTTGGTGTTGTAGAGCTAATTGCTGGGCTTTTTGGTGAACAGTCTTGTCG GTGTTTTGCGGCGAGTGTGCGCGCAAGTAGTAGGCAGGATTTTCCTGTGT GACGTAGTGCGTTTTCGGTAACAGCACGGGCGAGTCGTTCCAATTGTTGC AACCATGGTGTTGTGAGCCGCGTGTGATTACTCCCCGCGTGATATTTGAG AATCAATAGCGGCGTATGCCAAGTACGGTTGCTCGTCACGAATGGTACTC AGACGTGGCATTCGATCATAGCCTCCCCCTGCGTACCTTCTTGTAGGTCG TCGTGACGGCAGATTCTGTCAACACATCGAAACATTACGTACAGGAAGTT GTTTTTGAAAGCGGTATGAGAGCGTGTACACTGTTGTACTACCGATTGTC TTCCACGGACAGGAAGATTCTTCATTTTCTGACCTCCCGCCATTTCGCGA AAAATTAAATACACGCGTCATATTTCTCGCAGCAAGGCGTGATTCACCGG GACTTGAAGCCGGCGAACGTGCTGCTGACAAAGGTCGGGGAGGTGAGGAT CGCGGACTTGGGGGTATCTACCCATCTCCAGCCGTCACGCCCCCTCACGG AGAGCGGGGCGGGGACCATCCCGTTCATGGCCCCTGAGGTTCGAAAGTTC CTGCTCGGCTCGAAGGTTGCCTACTCTGGTGAG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10491:6831..10013+

>mRNA_D-dudresnayi_contig10491.542.1 ID=mRNA_D-dudresnayi_contig10491.542.1|Name=mRNA_D-dudresnayi_contig10491.542.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=3630bp|location=Sequence derived from alignment at D-dudresnayi_contig10491:6831..10013+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATTACGTCGCGTCTGGGCTCCTCCAGGGCCCCAAACACAATGCAGGTGCT
ACTGTGCAGTCACCGATGCGTCCGGTTGCATACCTTTGAGCCCGAAGATA
GAGCATACACGTCCACGCCGACTAAGATTGGCGGCCACTGCCTCGACCAC
ATCCGAAATGGACTCACCAGCACGTTTATCCAATCATCATCATCTCGTGC
GCCGAAAGACGGCAGAGATCATGATGGTTTCACTCAAGTCAAACCTCCCA
CATTATCGCCAACGTTTGATCCGAAGGGTAGGTTCGGGGGGTTGTGCGAC
GTGGTCTTGAGGCTATCGCCTTCTCCTCCTACTCCTCCTCCTCCTCCTCC
TCCTCTTCCTGCTACAGTAGTCTCCTTTTCTTCGGTTCGGCTTCAGCAGG
CGCAGGAAGTACAACTTTCTTCTTCAATGTTGTCACAACAGTGGGGGGTT
GTATGTTCTCCGTTGTGCTCGCAACCCAGGGAGCTTCCCCTGGACACCGA
TGCGTGGGAGCAGGGAGAAATTGTTGAGCATGGACCAAACTGGCCATGCT
CAAGCTCAATGAATCCGGGTGATGAGCGTGGTCCTTCCTTAGTAGGTCCC
TTTTTGGACCGGGCACACGGCCAACAACACAACAACAACGGTGGTGGTGT
GGTCAACGCCGCGGCTGGTCGGCACACCGGCGCGCTCATGGCGGTCTTGC
TGGCAAAGCTCGTGAATGGGGGTGGGAGGAGCTTGAGCGCGGAGGGAAGC
GTTGCTGACGCTGCTGAGGTTGCTCGCATTACGTCGCGTCTGGGCTCCTC
CAGGGCCCCAAACACAATGCAGGTGCTACTGTGCAGTCACCGATGCGTCC
GGTTGCATACCTTTGAGCCCGAAGATAGAGCATACACGTCCACGCCGACT
AAGATTGGCGGCCACTGCCTCGACCACATCCGAAATGGACTCACCAGCAC
GTTTATCCAATCATCATCATCTCGTGCGCCGAAAGACGGCAGAGATCATG
ATGGTTTCACTCAAGTCAAACCTCCCACATTATCGCCAACGTTTGATCCG
AAGGGTAGGTTCGGGGGGTTGTGCGACGTGGTCTTGAGGCTATCGCCTTC
TCCTCCTACTCCTCCTCCTCCTCCTCCTCCTCTTCCTGCTACAGTAGTCT
CCTTTTCTTCGGTTCGGCTTCAGCAGGCGCAGGAAGTACAACTTTCTTCT
TCAATGTTGTCACAACAGTGGGGGGTTGTATGTTCTCCGTTGTGCTCGCA
ACCCAGGGAGCTTCCCCTGGACACCGATGCGTGGGAGCAGGGAGAAATTG
TTGAGCATGGACCAAACTGGCCATGCTCAAGCTCAATGAATCCGGGTGAT
GAGCGTGGTCCTTCCTTAGTAGGTCCCTTTTTGGACCGGGCACACGGCCA
ACAACACAACAACAACGGTGGTGGTGTGGTCAACGCCGCGGCTGGTCGGC
ACACCGGCGCGCTCATGGCGGTCTTGCTGGCAAAGCTCGTGAATGGGGGT
GGGAGGAGCTTGAGCGCGGAGGGAAGCGTTGCTGACGCTGCTGAGGTTGC
TCGCGCGCGCTCCGAGCTCCGCAAGTGTGTTGTTGCCCAAGTTGATGCCG
CTTCTTTCGTGGCATCGCACGACGTGGCCGCCACGAGCGACCGCAACAAC
ATCGTCCAGGCCAATCGCGTCAAGGGCGGGCTGCCGGAAAATGCCTGCAT
GGTGGCGTGGCAAGCGCGTCTAGATCAAACCCCGAGCTATTCCAAGCTGC
GACGGTACAGCTTCGTGCGCGAGCTGGGCAGGGGCGCGCATGGCACCGTC
GTGCTCGTCCGAAAAAAATCGGCCGACAAGAACAATCGCCCTGGACGTTT
GCGAGTCCTGAAGGAGAGTCATTTTTTGACGGAGGCTGTCAACGAGGCGC
GCCTGTTGCTGCTGGCAGATGGGCGCGGTGCGCGGGCAGAGATGGGCGAG
GAGGATGGGCCACTTGGTGGTGATGAGTTGGTAGGCGCTGCTAACGGGTG
GAATGCTACTGTTTCGAAGCGGCGGTTGGTGGAGACTGTCGGAGCGTCGT
GGGGTGCCGGGGATAGCAGGCCCCAGAACGAGACTACTGTCGCGACTAGG
GACCGGGGCTACCGAACAGGAGGGGTTGTCCAGGCGCGCTCCGAGCTCCG
CAAGTGTGTTGTTGCCCAAGTTGATGCCGCTTCTTTCGTGGCATCGCACG
ACGTGGCCGCCACGAGCGACCGCAACAACATCGTCCAGGCCAATCGCGTC
AAGGGCGGGCTGCCGGAAAATGCCTGCATGGTGGCGTGGCAAGCGCGTCT
AGATCAAACCCCGAGCTATTCCAAGCTGCGACGGTACAGCTTCGTGCGCG
AGCTGGGCAGGGGCGCGCATGGCACCGTCGTGCTCGTCCGAAAAAAATCG
GCCGACAAGAACAATCGCCCTGGACGTTTGCGAGTCCTGAAGGAGAGTCA
TTTTTTGACGGAGGCTGTCAACGAGGCGCGCCTGTTGCTGCTGGCAGATG
GGCGCGGTGCGCGGGCAGAGATGGGCGAGGAGGATGGGCCACTTGGTGGT
GATGAGTTGGTAGGCGCTGCTAACGGGTGGAATGCTACTGTTTCGAAGCG
GCGGTTGGTGGAGACTGTCGGAGCGTCGTGGGGTGCCGGGGATAGCAGGC
CCCAGAACGAGACTACTGTCGCGACTAGGGACCGGGGCTACCGAACAGGA
GGGGTTGTCCAGTTGCACGACTTCTTCGTGGAGACACTGGGCCACCGCTC
CTTGGCCTTTTTGGAGCTAGAGTACTGCGACGGCGGAGACCTTCACGGGC
TTATGCTCGGCGAGGCCGAAGACGTGAACGGGTGGAGACAACGAGGGGCA
GAGGGGGCGGTGGAGAGCGTGGGGGCTGTCTGGAGTGTGCGAGGAGCGAT
TGGACTTCCAGTGGCGCAGATAGGTAGATTGGCGCTAGGAGTGTGCGAGG
GGGTGCAGCAGCTTCACGAGTTGCACGACTTCTTCGTGGAGACACTGGGC
CACCGCTCCTTGGCCTTTTTGGAGCTAGAGTACTGCGACGGCGGAGACCT
TCACGGGCTTATGCTCGGCGAGGCCGAAGACGTGAACGGGTGGAGACAAC
GAGGGGCAGAGGGGGCGGTGGAGAGCGTGGGGGCTGTCTGGAGTGTGCGA
GGAGCGATTGGACTTCCAGTGGCGCAGATAGGTAGATTGGCGCTAGGAGT
GTGCGAGGGGGTGCAGCAGCTTCACGAGCAAGGCGTGATTCACCGGGACT
TGAAGCCGGCGAACGTGCTGCTGACAAAGGTCGGGGAGGTGAGGATCGCG
GACTTGGGGGTATCTACCCATCTCCAGCCGTCACGCCCCCTCACGGAGAG
CGGGGCGGGGACCATCCCGTTCATGGCCCCTGAGGTTCGAAAGTTCCTGC
TCGGCTCGAAGGTTGCCTACTCTGGTGAGCAAGGCGTGATTCACCGGGAC
TTGAAGCCGGCGAACGTGCTGCTGACAAAGGTCGGGGAGGTGAGGATCGC
GGACTTGGGGGTATCTACCCATCTCCAGCCGTCACGCCCCCTCACGGAGA
GCGGGGCGGGGACCATCCCGTTCATGGCCCCTGAGGTTCGAAAGTTCCTG
CTCGGCTCGAAGGTTGCCTACTCTGGTGAG
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