mRNA_D-dudresnayi_contig10460.504.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10460.504.1
Unique NamemRNA_D-dudresnayi_contig10460.504.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig10460.504.1 vs. uniprot
Match: D7FKQ1_ECTSI (Protein tyrosine phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKQ1_ECTSI)

HSP 1 Score: 337 bits (865), Expect = 1.060e-114
Identity = 167/184 (90.76%), Postives = 175/184 (95.11%), Query Frame = 1 
Query:   16 NAASGRV-GTATMSAHPSLVEWKKLRFVIMDAPKANNLHLYLRELKKQNVMYVVRVCEPTYPASEVEAAGMKLLEMEYDDGGAPPTEIINKWLDVVQTTFHDAPDSSGPNGNEGPAIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLDTYERRSRGNGCSSCIIM 564
            N A GRV   ATMSAHPSLVEWKKLRFVIMDAPKANNLHLY+RELKKQNV+ VVRVCEPTYPASEVEAAG+KLLEMEYDDGGAPP EIINKWLDVVQTTFH+APDSSGPNG+EGP IAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLD+YERRS GNGCSSC++M
Sbjct:   23 NTALGRVEAAATMSAHPSLVEWKKLRFVIMDAPKANNLHLYIRELKKQNVVCVVRVCEPTYPASEVEAAGIKLLEMEYDDGGAPPVEIINKWLDVVQTTFHNAPDSSGPNGSEGPTIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLDSYERRSSGNGCSSCVVM 206
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BLAST of mRNA_D-dudresnayi_contig10460.504.1 vs. uniprot
Match: A0A6H5KJ35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ35_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 1.470e-112
Identity = 165/184 (89.67%), Postives = 174/184 (94.57%), Query Frame = 1 
Query:   16 NAASGRVG-TATMSAHPSLVEWKKLRFVIMDAPKANNLHLYLRELKKQNVMYVVRVCEPTYPASEVEAAGMKLLEMEYDDGGAPPTEIINKWLDVVQTTFHDAPDSSGPNGNEGPAIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLDTYERRSRGNGCSSCIIM 564
            N A GRV   ATMSAHPSLVEWKKLRFVIMDAPKANNLHLY+RELKKQNV+ VVRVCEPTYPASEVEAAGMKLLEMEYDDGGAPP EIINKWL+VV+TTFH+APDSSGPNG+EGP IAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLD+YERRS GN CSSC++M
Sbjct:   34 NTALGRVEPAATMSAHPSLVEWKKLRFVIMDAPKANNLHLYIRELKKQNVVCVVRVCEPTYPASEVEAAGMKLLEMEYDDGGAPPVEIINKWLNVVKTTFHNAPDSSGPNGSEGPTIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLDSYERRSSGNSCSSCVVM 217
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BLAST of mRNA_D-dudresnayi_contig10460.504.1 vs. uniprot
Match: A0A835YN25_9STRA (Protein tyrosine phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN25_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.230e-60
Identity = 108/180 (60.00%), Postives = 127/180 (70.56%), Query Frame = 1 
Query:   46 TMSAHPSLVEW-----KKLRFVIMDAPKANNLHLYLRELKKQNVMYVVRVCEPTYPASEVEAAGMKLLEMEYDDGGAPPTEIINKWLDVVQTTFHDAPDSSGPNGNEG---------------PAIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLDTYER 525
            +++  PSLVEW     +KL F+IMDAPKA+NL +YL+E KK NV+ +VRVCE TYPA EVE AG+ + EMEYDDG APP EII  WLDVV  TF     S GP+ N+                P +AVHCVAGLGRAPVLVAIALIE G +  +AVEYIR RRRGAINRKQLSYL+ Y+R
Sbjct:    8 SLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFR----SGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQR 183
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BLAST of mRNA_D-dudresnayi_contig10460.504.1 vs. uniprot
Match: A0A835ZE75_9STRA (Protein tyrosine phosphatase type IVA protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE75_9STRA)

HSP 1 Score: 194 bits (494), Expect = 9.860e-59
Identity = 108/184 (58.70%), Postives = 127/184 (69.02%), Query Frame = 1 
Query:   34 VGTATMSAHPSLVEW-----KKLRFVIMDAPKANNLHLYLRELKKQNVMYVVRVCEPTYPASEVEAAGMKLLEMEYDDGGAPPTEIINKWLDVVQTT-FHDAPDSSGPNGNEGPAIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLDTYE-RRSRGNGCSSCIIM 564
            V   +++  PSL+EW     +KL F+IMDAPKA+NL LYL+E K+ NV+ +VRVCE TYPA EV  AG+ +  MEY DG APP EIIN+WLDVV  T                P IAVHCVAGLGRAPVLVAIALIE G DPI AVEYIR+RRRGAINRKQL+YL+ Y   R R  G  +C +M
Sbjct:    4 VHATSLATRPSLIEWANKKGRKLSFLIMDAPKAHNLQLYLKECKRHNVVSMVRVCEDTYPAEEVTRAGIDMHHMEYPDGDAPPQEIINQWLDVVDVTGXXXXXXXXXXXXXXXPTIAVHCVAGLGRAPVLVAIALIESGMDPIHAVEYIRERRRGAINRKQLTYLERYAPTRHRRRG--TCAVM 185
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BLAST of mRNA_D-dudresnayi_contig10460.504.1 vs. uniprot
Match: A0A8K1FCX2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCX2_PYTOL)

HSP 1 Score: 190 bits (482), Expect = 3.820e-57
Identity = 103/168 (61.31%), Postives = 126/168 (75.00%), Query Frame = 1 
Query:   61 PSLVEWKKLRFVIMDAPKANNLHLYLRELKKQNVMYVVRVCEPTYPASEVEAAGMKLLEMEYDDGGAPPTEIINKWLDVVQTTFHDAPDSSGPNGNEGPAIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLDTYERRSRGNGCSSCIIM 564
            P+LV+W++L FVIMDAP  +NLHLYL+ELKK NV  +VR CE TY    VEAAG+++ EME+ DG  P  EI++KWLD+V  TF D  + +G   N+  +IAVHCVAGLGRAPVLVAIALIE+G DPI AVE+IR  RRGAIN +QL YL+ YE  SRG+  S C IM
Sbjct:    8 PTLVQWEELSFVIMDAPNNSNLHLYLKELKKYNVTELVRACEVTYGREGVEAAGIRVHEMEFPDGEPPDAEILDKWLDLVSETFKD--NKAGSRSNK--SIAVHCVAGLGRAPVLVAIALIEHGLDPINAVEHIRKHRRGAINLRQLKYLEKYEP-SRGHK-SKCSIM 169
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BLAST of mRNA_D-dudresnayi_contig10460.504.1 vs. uniprot
Match: A0A7S1UGF3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGF3_9STRA)

HSP 1 Score: 187 bits (476), Expect = 4.660e-56
Identity = 96/170 (56.47%), Postives = 120/170 (70.59%), Query Frame = 1 
Query:   46 TMSAHPSLVEWKKLRFVIMDAPKANNLHLYLRELKKQNVMYVVRVCEPTYPASEVEAAGMKLLEMEYDDGGAPPTEIINKWLDVVQTTFHDAPDSSGPNGNEGPAIAVHCVAGLGRAPVLVAIALIEY-GKDPIKAVEYIRDRRRGAINRKQLSYLDTYERRSRGNGCSS 552
            T++  PSLVE    RF+I DAPK  NL  YL E KKQNV ++VRVC+ TYP+S+VE+AG+ + EMEY DG  PP +II KWLDVV+  F   P S+  +    P + VHCVAGLGRAPVLVAIAL+E+ G DP++AV  IR +RRGAIN KQL +L+ Y     G GCS+
Sbjct:   12 TLAGRPSLVESNGYRFLIFDAPKEENLPQYLLECKKQNVSHLVRVCQQTYPSSQVESAGISMHEMEYADGTNPPDDIIEKWLDVVEDCFGPKPASAAASDGAAPCLGVHCVAGLGRAPVLVAIALVEFTGMDPVEAVAMIRKQRRGAINSKQLFWLERYRPSRGGTGCSN 181
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BLAST of mRNA_D-dudresnayi_contig10460.504.1 vs. uniprot
Match: A0A7S3GSY3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GSY3_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.860e-55
Identity = 97/168 (57.74%), Postives = 121/168 (72.02%), Query Frame = 1 
Query:   61 PSLVEWKKLRFVIMDAPKANNLHLYLRELKKQNVMYVVRVCEPTYPASEVEAAGMKLLEMEYDDGGAPPTEIINKWLDVVQTTFHDAPDSSGPNGNEGPAIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLDTYERRSRGNGCSSCIIM 564
            PSL+EW  LR +IMDAPK +NLHLYL++ KK NV  +VR+ EP+Y   EVE +G+ L EM Y DG +PP ++I +WL V+  TF    D+ GP+  E P IA+HCVAGLGRAPVLVAIALIEYG D I AV +IR+RRRGAIN  QL+YL++Y+   R  G   C IM
Sbjct:   11 PSLIEWGPLRLLIMDAPKDSNLHLYLKQCKKSNVTSIVRISEPSYSREEVEKSGIALHEMYYPDGHSPPPDVIARWLTVLADTF----DNKGPD--ETPCIAIHCVAGLGRAPVLVAIALIEYGMDAISAVTFIRERRRGAINTVQLNYLESYKP-MRKKGDKKCTIM 171
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BLAST of mRNA_D-dudresnayi_contig10460.504.1 vs. uniprot
Match: H3GU63_PHYRM (Uncharacterized protein n=24 Tax=Peronosporaceae TaxID=4777 RepID=H3GU63_PHYRM)

HSP 1 Score: 184 bits (467), Expect = 7.010e-55
Identity = 98/168 (58.33%), Postives = 126/168 (75.00%), Query Frame = 1 
Query:   61 PSLVEWKKLRFVIMDAPKANNLHLYLRELKKQNVMYVVRVCEPTYPASEVEAAGMKLLEMEYDDGGAPPTEIINKWLDVVQTTFHDAPDSSGPNGNEGPAIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLDTYERRSRGNGCSSCIIM 564
            P++V+W+ L FVIMDAP  +NLH+YL+ELKK NV  +VR CE TY +  VEAAG+ + E+E+ DG +P  EI+++WLD+V+  F D  +S     N+  +IAVHCVAGLGRAPVLVAIALIEYG DPI AVE+IR  RRGAIN +QL YL+ Y+ R RGN  + C+IM
Sbjct:    8 PTMVKWEHLSFVIMDAPNDSNLHIYLKELKKHNVTDLVRACEVTYSSESVEAAGIHVHELEFPDGESPDPEILDQWLDLVEECFKD--NSIDAKNNK--SIAVHCVAGLGRAPVLVAIALIEYGLDPINAVEHIRKFRRGAINLRQLKYLEKYQPR-RGNK-AKCVIM 169
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BLAST of mRNA_D-dudresnayi_contig10460.504.1 vs. uniprot
Match: A0A0P1AB79_PLAHL (Protein tyrosine phosphatase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AB79_PLAHL)

HSP 1 Score: 184 bits (466), Expect = 9.920e-55
Identity = 98/168 (58.33%), Postives = 122/168 (72.62%), Query Frame = 1 
Query:   61 PSLVEWKKLRFVIMDAPKANNLHLYLRELKKQNVMYVVRVCEPTYPASEVEAAGMKLLEMEYDDGGAPPTEIINKWLDVVQTTFHDAPDSSGPNGNEGPAIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLDTYERRSRGNGCSSCIIM 564
            P+LV+W+ L FVIMDAP  +NLH+YL+ELKK NV  +VR CE TY    VEAAG+ + E+E+ DG +P  +I++ WLD+V+  F D    +  N N   +IAVHCVAGLGRAPVLVAIALIEYG DPI AVE+IR  RRGAIN +QL YL+ Y+ R RGN  + C IM
Sbjct:    8 PTLVKWEHLSFVIMDAPNDSNLHIYLKELKKYNVSDLVRACEVTYSREAVEAAGIHVHELEFPDGESPDPDILDMWLDLVENCFKD----NVSNSNSNRSIAVHCVAGLGRAPVLVAIALIEYGLDPINAVEHIRKFRRGAINLRQLKYLEKYQPR-RGNK-AKCTIM 169
[Close]
BLAST of mRNA_D-dudresnayi_contig10460.504.1 vs. uniprot
Match: A0A7R9Y7Z4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y7Z4_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.550e-54
Identity = 98/178 (55.06%), Postives = 126/178 (70.79%), Query Frame = 1 
Query:   34 VGTATMSAHPSLVEWKKLRFVIMDAPKANNLHLYLRELKKQNVMYVVRVCEPTYPASEVEAAGMKLLEMEYDDGGAPPTEIINKWLDVVQTTFHDAPDSSGPNGNEGPAIAVHCVAGLGRAPVLVAIALIEYGK-DPIKAVEYIRDRRRGAINRKQLSYLDTYERRSRGNGCSSCIIM 564
            + T +++  PSLVE   +RF+I+DAPK ++L  YL E KK NV+++VRVC+PTY A  VE+AG+ + EMEY DG  PP E+I+KWLDVV+ TF      +    +E P IAVHCVAGLGRAPVLVAIALIE+   +P +AV  IR +RRGAIN KQL YL++Y     G  CS C+IM
Sbjct:   10 LNTVSLAGRPSLVEVDDMRFLILDAPKEHDLPQYLLECKKNNVVHLVRVCQPTYNAEHVESAGIHMHEMEYADGSHPPQEVIDKWLDVVEQTFSA---KAVAKADEKPCIAVHCVAGLGRAPVLVAIALIEFAALEPTEAVTLIRKQRRGAINSKQLQYLESYVATRAGGACS-CVIM 183
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10460.504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKQ1_ECTSI1.060e-11490.76Protein tyrosine phosphatase n=1 Tax=Ectocarpus si... [more]
A0A6H5KJ35_9PHAE1.470e-11289.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YN25_9STRA1.230e-6060.00Protein tyrosine phosphatase n=1 Tax=Tribonema min... [more]
A0A835ZE75_9STRA9.860e-5958.70Protein tyrosine phosphatase type IVA protein 1 n=... [more]
A0A8K1FCX2_PYTOL3.820e-5761.31Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1UGF3_9STRA4.660e-5656.47Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3GSY3_9STRA1.860e-5557.74Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
H3GU63_PHYRM7.010e-5558.33Uncharacterized protein n=24 Tax=Peronosporaceae T... [more]
A0A0P1AB79_PLAHL9.920e-5558.33Protein tyrosine phosphatase n=1 Tax=Plasmopara ha... [more]
A0A7R9Y7Z4_9STRA1.550e-5455.06Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10460contigD-dudresnayi_contig10460:3907..5388 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score186.4
Seed ortholog evalue1.1e-44
Seed eggNOG ortholog4787.PITG_05251T0
Preferred namePTP4A2
KEGG koko:K01104,ko:K18041
GOsGO:0000323,GO:0001667,GO:0003008,GO:0003013,GO:0003018,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0004727,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005768,GO:0005769,GO:0005773,GO:0005783,GO:0005819,GO:0005829,GO:0005856,GO:0005886,GO:0005929,GO:0006355,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0008015,GO:0008138,GO:0008150,GO:0008152,GO:0009889,GO:0009898,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010631,GO:0010646,GO:0010647,GO:0012505,GO:0015630,GO:0016020,GO:0016311,GO:0016477,GO:0016787,GO:0016788,GO:0016791,GO:0018995,GO:0019219,GO:0019222,GO:0019538,GO:0020016,GO:0020023,GO:0023051,GO:0023052,GO:0023056,GO:0030334,GO:0030335,GO:0030430,GO:0031323,GO:0031326,GO:0031410,GO:0031910,GO:0031982,GO:0032501,GO:0032879,GO:0032880,GO:0033643,GO:0033646,GO:0034097,GO:0035335,GO:0036211,GO:0040011,GO:0040012,GO:0040017,GO:0042221,GO:0042578,GO:0042995,GO:0043114,GO:0043117,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043230,GO:0043231,GO:0043232,GO:0043412,GO:0043542,GO:0043656,GO:0043657,GO:0043687,GO:0044215,GO:0044216,GO:0044217,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048870,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051179,GO:0051252,GO:0051270,GO:0051272,GO:0051674,GO:0051716,GO:0060255,GO:0065007,GO:0065008,GO:0070062,GO:0070201,GO:0070887,GO:0071310,GO:0071345,GO:0071704,GO:0071944,GO:0080090,GO:0090130,GO:0090132,GO:0090287,GO:0097708,GO:0098552,GO:0098562,GO:0120025,GO:0120038,GO:0140096,GO:1900746,GO:1901222,GO:1901224,GO:1901564,GO:1902531,GO:1902533,GO:1902547,GO:1903506,GO:1903561,GO:1904951,GO:1990823,GO:1990830,GO:2000112,GO:2000145,GO:2000147,GO:2001141
EggNOG free text desc.protein tyrosine phosphatase activity
EggNOG OGs3QAQB@4776,KOG2836@1,KOG2836@2759
EC3.1.3.48
COG Functional cat.T
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionprotein tyrosine phosphatase
Ec32 orthologEc-21_001700.1
Exons3
Model size859
Cds size519
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10460.504.1prot_D-dudresnayi_contig10460.504.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10460 3955..5096 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927548.0792933-UTR-D-dudresnayi_contig10460:3906..39541622927548.0792933-UTR-D-dudresnayi_contig10460:3906..3954Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10460 3907..3954 +
1690556802.1701095-UTR-D-dudresnayi_contig10460:3906..39541690556802.1701095-UTR-D-dudresnayi_contig10460:3906..3954Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10460 3907..3954 +
1622927548.1305547-UTR-D-dudresnayi_contig10460:5096..53881622927548.1305547-UTR-D-dudresnayi_contig10460:5096..5388Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10460 5097..5388 +
1690556802.2199833-UTR-D-dudresnayi_contig10460:5096..53881690556802.2199833-UTR-D-dudresnayi_contig10460:5096..5388Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10460 5097..5388 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927548.0926294-CDS-D-dudresnayi_contig10460:3954..41341622927548.0926294-CDS-D-dudresnayi_contig10460:3954..4134Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10460 3955..4134 +
1690556802.1872644-CDS-D-dudresnayi_contig10460:3954..41341690556802.1872644-CDS-D-dudresnayi_contig10460:3954..4134Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10460 3955..4134 +
1622927548.1051865-CDS-D-dudresnayi_contig10460:4419..46261622927548.1051865-CDS-D-dudresnayi_contig10460:4419..4626Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10460 4420..4626 +
1690556802.199902-CDS-D-dudresnayi_contig10460:4419..46261690556802.199902-CDS-D-dudresnayi_contig10460:4419..4626Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10460 4420..4626 +
1622927548.116329-CDS-D-dudresnayi_contig10460:4964..50961622927548.116329-CDS-D-dudresnayi_contig10460:4964..5096Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10460 4965..5096 +
1690556802.2097511-CDS-D-dudresnayi_contig10460:4964..50961690556802.2097511-CDS-D-dudresnayi_contig10460:4964..5096Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10460 4965..5096 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10460.504.1

>prot_D-dudresnayi_contig10460.504.1 ID=prot_D-dudresnayi_contig10460.504.1|Name=mRNA_D-dudresnayi_contig10460.504.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=173bp
MSAHPSLVEWKKLRFVIMDAPKANNLHLYLRELKKQNVMYVVRVCEPTYP
ASEVEAAGMKLLEMEYDDGGAPPTEIINKWLDVVQTTFHDAPDSSGPNGN
EGPAIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQ
LSYLDTYERRSRGNGCSSCIIM*
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mRNA from alignment at D-dudresnayi_contig10460:3907..5388+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10460.504.1 ID=mRNA_D-dudresnayi_contig10460.504.1|Name=mRNA_D-dudresnayi_contig10460.504.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1482bp|location=Sequence derived from alignment at D-dudresnayi_contig10460:3907..5388+ (Desmarestia dudresnayi DdudBR16 monoicous)
AGGGCCACGTCTGCCAACGCTGCCTCAGGCAGGGTGGGGACTGCGACGAT
GTCTGCGCACCCGTCGCTGGTGGAGTGGAAAAAACTCCGATTCGTCATCA
TGGACGCTCCCAAGGCCAATAACCTTCACCTGTACCTTCGAGAGCTCAAG
AAGCAGAATGTGATGTACGTGGTGCGAGTCTGCGAGCCGACGTACCCCGC
GTCGGAGGTGGAGGCAGCGGGGATGAAGGTACAGTAAAAAGGGTTAGAGA
AACTACCGTCGCGGCCGGTGATTGTTTGGTGGCTGACCGACCTCCTTGTG
GCACCGTTCCTCGTTACGTTTTGCTTTTTTGCGCCGTACACACCTTGAGC
GCCTCAAGGATACACTAATCTTGGCACTTGGTACATGACGACGCCGACCC
GGCAGGCTTTGAGTTGAGCGAGCAGTTTCTGTAACACTCGCCGAGCGCAT
GTTTTGTTTCCCCCGCCGTTTTTTAATGCCTTGCCGGTTCTGTTTTGCTG
TGTTGTATGATAGCTGCTGGAGATGGAGTACGACGACGGGGGAGCCCCGC
CCACGGAGATCATAAACAAGTGGCTCGACGTGGTTCAGACCACCTTCCAC
GACGCTCCCGATAGTTCCGGGCCCAATGGGAACGAAGGACCCGCAATCGC
GGTGCACTGCGTGGCGGGGCTTGGAAGGGCGCCGGTTTTAGTAGCTATTG
CTCTCATTGAGTACGGGAAGGTGAGCTGACACACCGTTATTTCTTAGTAC
GCGGAAAGGCAGAGCCGTAACGATACACGGGTAGTCAGAGCTTGATACCT
TCGGACATTATCAAGCCCAAGAACGTGTGTAGAATATCCACACTTGGCTG
CTGGTGGTATGGCTCCCACCCTTGATGCAGTCCTTGGTCCCGACGTCATT
GCGTGCATCCACTCTGGTGTCTATAGCCAACACGAAGGTGGGTATGATAG
CCCAACATGCGGTCACTTAATTGGACTGTTACGAGTACGTGCAGTCAGTA
GCTTTGTGTAATGGAAATTTGAACCTTGCCCGCCATTGTCACTGGCGCAT
GCTCGCAGGACCCAATCAAGGCAGTGGAGTACATTCGCGATAGACGCCGG
GGCGCCATTAACCGCAAGCAGCTGTCGTACCTCGACACGTACGAGCGAAG
GAGCAGGGGCAACGGGTGCTCGTCTTGCATAATTATGTAAAAGTTCGCCA
GCATCACAGGGTAGAGTATCGGTATGACAGCTAGAAGTCACATTTTTGTA
TTTGGGCAGTTATTTGGCTTCGCACAGGGCTGCCCCATCGAAACATTTTC
TGAGCGGGGGTGATGAGGGGGGGCGTCGTTTTCCGTGGCGCACCCAGGTA
TAGATGGTGCATGGACACACCAAACTGCCAGCTGTTTTGGACGGTTTGAT
TTTGAAGCAGTTGAGCAATGCATTTGAAGATGGTGTTCGCGTCTTTACTT
TTAAATACGGCAATATACATATTGACGGGGGG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10460:3907..5388+

>mRNA_D-dudresnayi_contig10460.504.1 ID=mRNA_D-dudresnayi_contig10460.504.1|Name=mRNA_D-dudresnayi_contig10460.504.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1038bp|location=Sequence derived from alignment at D-dudresnayi_contig10460:3907..5388+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTCTGCGCACCCGTCGCTGGTGGAGTGGAAAAAACTCCGATTCGTCAT
CATGGACGCTCCCAAGGCCAATAACCTTCACCTGTACCTTCGAGAGCTCA
AGAAGCAGAATGTGATGTACGTGGTGCGAGTCTGCGAGCCGACGTACCCC
GCGTCGGAGGTGGAGGCAGCGGGGATGAAGATGTCTGCGCACCCGTCGCT
GGTGGAGTGGAAAAAACTCCGATTCGTCATCATGGACGCTCCCAAGGCCA
ATAACCTTCACCTGTACCTTCGAGAGCTCAAGAAGCAGAATGTGATGTAC
GTGGTGCGAGTCTGCGAGCCGACGTACCCCGCGTCGGAGGTGGAGGCAGC
GGGGATGAAGCTGCTGGAGATGGAGTACGACGACGGGGGAGCCCCGCCCA
CGGAGATCATAAACAAGTGGCTCGACGTGGTTCAGACCACCTTCCACGAC
GCTCCCGATAGTTCCGGGCCCAATGGGAACGAAGGACCCGCAATCGCGGT
GCACTGCGTGGCGGGGCTTGGAAGGGCGCCGGTTTTAGTAGCTATTGCTC
TCATTGAGTACGGGAAGCTGCTGGAGATGGAGTACGACGACGGGGGAGCC
CCGCCCACGGAGATCATAAACAAGTGGCTCGACGTGGTTCAGACCACCTT
CCACGACGCTCCCGATAGTTCCGGGCCCAATGGGAACGAAGGACCCGCAA
TCGCGGTGCACTGCGTGGCGGGGCTTGGAAGGGCGCCGGTTTTAGTAGCT
ATTGCTCTCATTGAGTACGGGAAGGACCCAATCAAGGCAGTGGAGTACAT
TCGCGATAGACGCCGGGGCGCCATTAACCGCAAGCAGCTGTCGTACCTCG
ACACGTACGAGCGAAGGAGCAGGGGCAACGGGTGCTCGTCTTGCATAATT
ATGTAAGACCCAATCAAGGCAGTGGAGTACATTCGCGATAGACGCCGGGG
CGCCATTAACCGCAAGCAGCTGTCGTACCTCGACACGTACGAGCGAAGGA
GCAGGGGCAACGGGTGCTCGTCTTGCATAATTATGTAA
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