mRNA_D-dudresnayi_contig10451.490.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10451.490.1
Unique NamemRNA_D-dudresnayi_contig10451.490.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig10451.490.1 vs. uniprot
Match: D7G7L2_ECTSI (G-patch_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7L2_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 6.820e-20
Identity = 44/55 (80.00%), Postives = 48/55 (87.27%), Query Frame = 1 
Query:  109 GILTQNGIPGLAEIDGENEKFKHDLGHRAEDVSVRSKAYVDVPVNEFGAALLRGM 273
            G+L QN IPGL E+DGE+ KF+HDLGHRAED S RSKAYVDVPV EFGAALLRGM
Sbjct:  198 GLLEQNMIPGLMEVDGEDAKFRHDLGHRAEDFSARSKAYVDVPVAEFGAALLRGM 252
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BLAST of mRNA_D-dudresnayi_contig10451.490.1 vs. uniprot
Match: A0A1V9Z1I1_9STRA (G-patch_2 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z1I1_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 9.120e-12
Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 1 
Query:  112 ILTQNGIPGLAEIDGENEKFKHDLGHRAEDVSVRSKAYVDVPVNEFGAALLRGM 273
            IL +N +PG   +  EN+KFKHD+ HR +D+ + S+AY  VP+ EFGAALLRGM
Sbjct:  114 ILFRNKVPGADGMTNENDKFKHDISHRPDDMDIHSEAYEAVPIEEFGAALLRGM 167
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BLAST of mRNA_D-dudresnayi_contig10451.490.1 vs. uniprot
Match: A0A067CMB8_SAPPC (G-patch_2 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CMB8_SAPPC)

HSP 1 Score: 67.0 bits (162), Expect = 3.210e-11
Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 1 
Query:  112 ILTQNGIPGLAEIDGENEKFKHDLGHRAEDVSVRSKAYVDVPVNEFGAALLRGM 273
            IL +N +PGL  +  EN+KFKHD+  R +D+ + S AY  VP+ EFGAALLRGM
Sbjct:  118 ILFRNKLPGLENLTNENDKFKHDISMRPDDMDIHSDAYEAVPIEEFGAALLRGM 171
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BLAST of mRNA_D-dudresnayi_contig10451.490.1 vs. uniprot
Match: A0A024THQ2_9STRA (G-patch_2 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024THQ2_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 5.020e-11
Identity = 30/54 (55.56%), Postives = 41/54 (75.93%), Query Frame = 1 
Query:  112 ILTQNGIPGLAEIDGENEKFKHDLGHRAEDVSVRSKAYVDVPVNEFGAALLRGM 273
            +LT+N IPG+ +I GE  KFKHDL  R +++ + S+A+  VP+ EFGAALLRGM
Sbjct:  125 MLTRNRIPGMDKIVGETNKFKHDLSMRPDELDIHSEAFEAVPIEEFGAALLRGM 178
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BLAST of mRNA_D-dudresnayi_contig10451.490.1 vs. uniprot
Match: W4GHW1_9STRA (G-patch_2 domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GHW1_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.480e-10
Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 1 
Query:  112 ILTQNGIPGLAEIDGENEKFKHDLGHRAEDVSVRSKAYVDVPVNEFGAALLRGM 273
            +LT+N IPG+ +I GE  KFKHDL  R +++ + S A+  VP+ EFGAALLRGM
Sbjct:  128 MLTRNRIPGMDKIVGETNKFKHDLSMRPDELDIHSDAFDAVPIEEFGAALLRGM 181
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BLAST of mRNA_D-dudresnayi_contig10451.490.1 vs. uniprot
Match: A0A1V9YAW8_9STRA (G-patch_2 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAW8_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.500e-10
Identity = 29/54 (53.70%), Postives = 39/54 (72.22%), Query Frame = 1 
Query:  112 ILTQNGIPGLAEIDGENEKFKHDLGHRAEDVSVRSKAYVDVPVNEFGAALLRGM 273
            IL +N +PG+  +  EN+KFKHD+  R +D+ + S AY  VP+ EFGAALLRGM
Sbjct:  116 ILFRNKLPGIENLANENDKFKHDISLRPDDMDIHSDAYEAVPIEEFGAALLRGM 169
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BLAST of mRNA_D-dudresnayi_contig10451.490.1 vs. uniprot
Match: A0A7S1TSS7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSS7_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 3.580e-10
Identity = 28/54 (51.85%), Postives = 41/54 (75.93%), Query Frame = 1 
Query:  112 ILTQNGIPGLAEIDGENEKFKHDLGHRAEDVSVRSKAYVDVPVNEFGAALLRGM 273
            +L Q  +PGL EI+ E+ KFKHDL +RAED+  + +AY  + +++FGAA+LRGM
Sbjct:   50 LLLQGMVPGLNEIESEDAKFKHDLRYRAEDLGAKDEAYQRIKIDDFGAAMLRGM 103
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BLAST of mRNA_D-dudresnayi_contig10451.490.1 vs. uniprot
Match: A0A7S3XXE9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXE9_HETAK)

HSP 1 Score: 62.8 bits (151), Expect = 5.290e-10
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 1 
Query:   73 AAREVGEQNAVNGILTQNGIPGLAEIDGENEKFKHDLGHRAEDVSVRSKAYVDVPVNEFGAALLRGM 273
            AA E     ++  ++  N IPGL EI  + E+F  D+G RAED+  +S+AY  VPV EFGAA+LRGM
Sbjct:  102 AAAEAARDKSLPTLIA-NAIPGLKEIADDQERFLKDVGMRAEDMDFKSEAYRAVPVEEFGAAMLRGM 167
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BLAST of mRNA_D-dudresnayi_contig10451.490.1 vs. uniprot
Match: A0A2D4BLD4_PYTIN (G-patch_2 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLD4_PYTIN)

HSP 1 Score: 63.9 bits (154), Expect = 5.510e-10
Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 1 
Query:  112 ILTQNGIPGLAEIDGENEKFKHDLGHRAEDVSVRSKAYVDVPVNEFGAALLRGM 273
            IL QN +PGL E+    EK++HD+  R E + V S+ Y DVPV EFGAA+LRGM
Sbjct:  207 ILQQNAVPGLDELADVTEKYRHDVALRPEALDVNSEVYDDVPVEEFGAAMLRGM 260
[Close]
BLAST of mRNA_D-dudresnayi_contig10451.490.1 vs. uniprot
Match: A0A485LIS8_9STRA (Aste57867_21911 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIS8_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 8.930e-10
Identity = 27/54 (50.00%), Postives = 39/54 (72.22%), Query Frame = 1 
Query:  112 ILTQNGIPGLAEIDGENEKFKHDLGHRAEDVSVRSKAYVDVPVNEFGAALLRGM 273
            +L++N IPG+  + G+  KFKHDL  R +++ + S A+  VP+ EFGAALLRGM
Sbjct:  124 LLSRNRIPGMENVAGDKNKFKHDLSMRPDELDIHSDAFDAVPIEEFGAALLRGM 177
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10451.490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7L2_ECTSI6.820e-2080.00G-patch_2 domain-containing protein n=2 Tax=Ectoca... [more]
A0A1V9Z1I1_9STRA9.120e-1255.56G-patch_2 domain-containing protein n=1 Tax=Thraus... [more]
A0A067CMB8_SAPPC3.210e-1155.56G-patch_2 domain-containing protein n=2 Tax=Saprol... [more]
A0A024THQ2_9STRA5.020e-1155.56G-patch_2 domain-containing protein n=1 Tax=Aphano... [more]
W4GHW1_9STRA1.480e-1055.56G-patch_2 domain-containing protein n=4 Tax=Aphano... [more]
A0A1V9YAW8_9STRA1.500e-1053.70G-patch_2 domain-containing protein n=1 Tax=Achlya... [more]
A0A7S1TSS7_9STRA3.580e-1051.85Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3XXE9_HETAK5.290e-1049.25Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2D4BLD4_PYTIN5.510e-1055.56G-patch_2 domain-containing protein n=1 Tax=Pythiu... [more]
A0A485LIS8_9STRA8.930e-1050.00Aste57867_21911 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10451contigD-dudresnayi_contig10451:3914..4186 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score94.0
Seed ortholog evalue3.9e-17
Seed eggNOG ortholog2880.D7G7L2
Preferred nameGPKOW
KEGG rclassRC00010
KEGG koko:K10798,ko:K13101,ko:K13566
KEGG ReactionR00269,R00348
KEGG Pathwayko00250,ko03410,ko04210,ko04212,ko04214,ko04217,map00250,map03410,map04210,map04212,map04214,map04217
KEGG ModuleM00296
GOsGO:0000375,GO:0000377,GO:0000398,GO:0002218,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008380,GO:0009605,GO:0009607,GO:0009617,GO:0009870,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0023052,GO:0031347,GO:0031349,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0042742,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0046483,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070013,GO:0071704,GO:0080134,GO:0090304,GO:0097159,GO:0098542,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.defense response signaling pathway, resistance gene-dependent
EggNOG OGsKOG4315@1,KOG4315@2759
EC2.4.2.30,3.5.1.3
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03036,ko03041,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHomologue of Arabidopsis MOS2 (MODIFIER OF SNC1, 2)
Ec32 orthologEc-22_001960.1
Exons1
Model size273
Cds size273
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927546.3187373-CDS-D-dudresnayi_contig10451:3913..41861622927546.3187373-CDS-D-dudresnayi_contig10451:3913..4186Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10451 3914..4186 +
1690556801.4518836-CDS-D-dudresnayi_contig10451:3913..41861690556801.4518836-CDS-D-dudresnayi_contig10451:3913..4186Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10451 3914..4186 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10451.490.1prot_D-dudresnayi_contig10451.490.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10451 3914..4186 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10451.490.1

>prot_D-dudresnayi_contig10451.490.1 ID=prot_D-dudresnayi_contig10451.490.1|Name=mRNA_D-dudresnayi_contig10451.490.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=91bp
MATAKPSGGAAGADDGRIGHGEGTAAREVGEQNAVNGILTQNGIPGLAEI
DGENEKFKHDLGHRAEDVSVRSKAYVDVPVNEFGAALLRGM
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mRNA from alignment at D-dudresnayi_contig10451:3914..4186+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10451.490.1 ID=mRNA_D-dudresnayi_contig10451.490.1|Name=mRNA_D-dudresnayi_contig10451.490.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=273bp|location=Sequence derived from alignment at D-dudresnayi_contig10451:3914..4186+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGCGACGGCGAAGCCTAGCGGCGGTGCTGCCGGGGCAGACGATGGCCG
TATCGGCCACGGAGAGGGAACGGCGGCTCGCGAGGTCGGCGAACAAAACG
CCGTCAACGGCATCCTAACGCAGAACGGGATCCCGGGGCTGGCGGAGATA
GACGGGGAAAACGAGAAGTTTAAGCACGATCTGGGGCACCGGGCGGAGGA
CGTGAGCGTGCGGAGCAAGGCTTACGTCGACGTTCCCGTGAACGAGTTCG
GCGCCGCTTTGCTGAGAGGGATG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10451:3914..4186+

>mRNA_D-dudresnayi_contig10451.490.1 ID=mRNA_D-dudresnayi_contig10451.490.1|Name=mRNA_D-dudresnayi_contig10451.490.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=546bp|location=Sequence derived from alignment at D-dudresnayi_contig10451:3914..4186+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGCGACGGCGAAGCCTAGCGGCGGTGCTGCCGGGGCAGACGATGGCCG
TATCGGCCACGGAGAGGGAACGGCGGCTCGCGAGGTCGGCGAACAAAACG
CCGTCAACGGCATCCTAACGCAGAACGGGATCCCGGGGCTGGCGGAGATA
GACGGGGAAAACGAGAAGTTTAAGCACGATCTGGGGCACCGGGCGGAGGA
CGTGAGCGTGCGGAGCAAGGCTTACGTCGACGTTCCCGTGAACGAGTTCG
GCGCCGCTTTGCTGAGAGGGATGATGGCGACGGCGAAGCCTAGCGGCGGT
GCTGCCGGGGCAGACGATGGCCGTATCGGCCACGGAGAGGGAACGGCGGC
TCGCGAGGTCGGCGAACAAAACGCCGTCAACGGCATCCTAACGCAGAACG
GGATCCCGGGGCTGGCGGAGATAGACGGGGAAAACGAGAAGTTTAAGCAC
GATCTGGGGCACCGGGCGGAGGACGTGAGCGTGCGGAGCAAGGCTTACGT
CGACGTTCCCGTGAACGAGTTCGGCGCCGCTTTGCTGAGAGGGATG
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