mRNA_D-dudresnayi_contig10444.483.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10444.483.1
Unique NamemRNA_D-dudresnayi_contig10444.483.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10444.483.1 vs. uniprot
Match: A0A6H5JPS1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPS1_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 9.360e-7
Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 3
Query: 1302 FCNSIGCPNNYTPVPEAWKVRCEDGRCTEEQCCLA 1406
            +CNSIGCP  YTP+P AW+V C+D  C   QCC A
Sbjct:    7 YCNSIGCPGGYTPIPNAWEVECDDDPCEVSQCCEA 41          
BLAST of mRNA_D-dudresnayi_contig10444.483.1 vs. uniprot
Match: D7G5E9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E9_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 7.580e-5
Identity = 21/35 (60.00%), Postives = 24/35 (68.57%), Query Frame = 3
Query: 1302 FCNSIGCPNNYTPVPEAWKVRCEDGRCTEEQCCLA 1406
            +CNSIGCP  YTP+P AW+V C D  C   QCC A
Sbjct:  128 YCNSIGCPGGYTPIPNAWEVECYDDSCEVSQCCEA 162          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10444.483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JPS1_9PHAE9.360e-760.00Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7G5E9_ECTSI7.580e-560.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10444contigD-dudresnayi_contig10444:337..7136 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons7
Model size3669
Cds size1860
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927545.8206835-UTR-D-dudresnayi_contig10444:336..14811622927545.8206835-UTR-D-dudresnayi_contig10444:336..1481Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10444 337..1481 +
1690556801.2344608-UTR-D-dudresnayi_contig10444:336..14811690556801.2344608-UTR-D-dudresnayi_contig10444:336..1481Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10444 337..1481 +
1622927545.9183795-UTR-D-dudresnayi_contig10444:6472..71361622927545.9183795-UTR-D-dudresnayi_contig10444:6472..7136Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10444 6473..7136 +
1690556801.3034666-UTR-D-dudresnayi_contig10444:6472..71361690556801.3034666-UTR-D-dudresnayi_contig10444:6472..7136Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10444 6473..7136 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927545.8330495-CDS-D-dudresnayi_contig10444:1481..15721622927545.8330495-CDS-D-dudresnayi_contig10444:1481..1572Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10444 1482..1572 +
1690556801.2448092-CDS-D-dudresnayi_contig10444:1481..15721690556801.2448092-CDS-D-dudresnayi_contig10444:1481..1572Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10444 1482..1572 +
1622927545.8442836-CDS-D-dudresnayi_contig10444:2007..20601622927545.8442836-CDS-D-dudresnayi_contig10444:2007..2060Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10444 2008..2060 +
1690556801.253668-CDS-D-dudresnayi_contig10444:2007..20601690556801.253668-CDS-D-dudresnayi_contig10444:2007..2060Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10444 2008..2060 +
1622927545.861268-CDS-D-dudresnayi_contig10444:2598..28211622927545.861268-CDS-D-dudresnayi_contig10444:2598..2821Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10444 2599..2821 +
1690556801.2670069-CDS-D-dudresnayi_contig10444:2598..28211690556801.2670069-CDS-D-dudresnayi_contig10444:2598..2821Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10444 2599..2821 +
1622927545.8743513-CDS-D-dudresnayi_contig10444:3604..37331622927545.8743513-CDS-D-dudresnayi_contig10444:3604..3733Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10444 3605..3733 +
1690556801.2745628-CDS-D-dudresnayi_contig10444:3604..37331690556801.2745628-CDS-D-dudresnayi_contig10444:3604..3733Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10444 3605..3733 +
1622927545.8840668-CDS-D-dudresnayi_contig10444:4244..52581622927545.8840668-CDS-D-dudresnayi_contig10444:4244..5258Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10444 4245..5258 +
1690556801.2817383-CDS-D-dudresnayi_contig10444:4244..52581690556801.2817383-CDS-D-dudresnayi_contig10444:4244..5258Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10444 4245..5258 +
1622927545.8941147-CDS-D-dudresnayi_contig10444:5503..58301622927545.8941147-CDS-D-dudresnayi_contig10444:5503..5830Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10444 5504..5830 +
1690556801.289147-CDS-D-dudresnayi_contig10444:5503..58301690556801.289147-CDS-D-dudresnayi_contig10444:5503..5830Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10444 5504..5830 +
1622927545.9057786-CDS-D-dudresnayi_contig10444:6449..64721622927545.9057786-CDS-D-dudresnayi_contig10444:6449..6472Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10444 6450..6472 +
1690556801.296312-CDS-D-dudresnayi_contig10444:6449..64721690556801.296312-CDS-D-dudresnayi_contig10444:6449..6472Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10444 6450..6472 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10444.483.1prot_D-dudresnayi_contig10444.483.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10444 1482..6472 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10444.483.1

>prot_D-dudresnayi_contig10444.483.1 ID=prot_D-dudresnayi_contig10444.483.1|Name=mRNA_D-dudresnayi_contig10444.483.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=620bp
MMNRAYAAVAAFLPVVAMRAAAGISFQDASGMVEQAKASLRGRRTTEEPK
PKFCNSIGCPNNYTPVPEAWKVRCEDGRCTEEQCCLAMCACFPCPDGYIP
IEEVKYDLCYDNRCTEKQCCEKPRPVCSEVACSDGYVPIDDAQHTKCDNG
YCKEKQCCKRHEAKRPRVEHCDKFDVKDCPRDYYLVEYPEHVECHDGYCK
ADKCCTYRKEQKREREVKYCDRFDAKDCPRDYYLVDYPERVECHDGRCEA
SKCCTYRKKEKREREVKYCDKFDAKDCPRDHYLVDYPERVECHDGYCKAD
KCCTSRKEEKREREVKYCDKFDAKDCPRDHYLVDYPERVECHDGYCEADK
CCTYRKEEKHEREVKHCDRFDAKDCPRDHYLVDYPERVECHDGYCKADKC
CTYHKEEKREREVKYCDKFDATDCPLDYYLVDYPERVECHDGHCNFDKCC
TYRKEEKRERKEKPMKKFCRDFDYCGRDYELIYDADIVECWEGVCDEDQC
CMKRPRDRKGKNEFDYCSTVYCPHDTHRPIDDADRKKCTVNDHDKTDSYR
SDDYLATGHGYSYDYYETDDYTDELYFYSYDYSDSAMWSSVRSDRGVKTV
YCDVDNCCRRIEYGLFGPE*
back to top

mRNA from alignment at D-dudresnayi_contig10444:337..7136+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10444.483.1 ID=mRNA_D-dudresnayi_contig10444.483.1|Name=mRNA_D-dudresnayi_contig10444.483.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=6800bp|location=Sequence derived from alignment at D-dudresnayi_contig10444:337..7136+ (Desmarestia dudresnayi DdudBR16 monoicous)
ACCATGTGGATCAGCCAGGTACAAAGCTCGCAAGGGACACGAAAGGACCC CCTGAACTCTTTCGCATCTTGCAGTGGGGTCAAGCATTGTCGTGCCACTG GCCCATTTGCGTGAAGCTCATGGCCGGTGCCCGCGCTAACGATTGTTTTT GGTGACGTTCCTGTTGTTGTTGCGTCTTGAGCTTCTGCAATAATATTTGT TCGTTTGGTTTGTCCTACCTACTAGAAGCGAGCTCTATACTATAGACTAA ATATATTATTGTCTTACCTATCTGGTGTACAATCATCGATAATATAAACA CTCATATATAATTAATTATTTTCAATAGACAGGGAGGACAAATAGATGTT GCATAATTCAGTTGTCCGCTTTCCATTTGCTTTATCCCCAGCATTATCTC ATCTACCTCTGAGGACCGACGCCCAAACGGGTAAGGTGGAGACCGTAACT GAACAGAGTCCGGCGGGCAAGACGGCATATTCTCAGCCTCGTATATCGTA ACATAATTCTTGCGTACAAGTATGATGATTCCTTCTTGCTTCGTAAAAAG TACCAGGAAATAAAAAATCCATGAACGGTTCGGGTTCTCACTTTTTTCAT GGGCGCGACCCGCGAAACGTCAAAATTTACCCGAACCGATATTTTTGTTG CACGAATTATTTTCTGCGAGGAAACTTGAACAAGCATAAAGAAAGTGTGG TATGATATGAGTTACGAGTACGTACGCATGTACGCACAGAACACAACAGT AGTACTGTTGTAGTAGTAGTCAGTGTTGAGGGTTGGGACACTGACATCCA GTACAGAGTAGGTTCTGGGGTCCTGTGAGTGGGAAGTAAACGGACATTCT TTGTGTGACAAGAAAGGACAACAAAAAAATAAACAATTATTGCAGTCGGA CCCTTCTTTGCTTTTGATGGTCTGCATCATAGTTGATGGGGTCCCCATGG GCGGCGGAGAGAGGGCGATGGGTTCTACCCACACCCACCCCATCACTCTG TTTCGTTCCTTCTGCCTTCCTGCTCTGTCTGGAGGCTTGCACACTCAAGC AAACACAATAACTATTGCGAGAGAGCCCCGAAAAGGCAGTACAACAACAG AGTAGCACTTTTGCACTACTACTTGTTGTGAGGCGAGTCGTCATCATGAT GAATCGAGCGTACGCCGCTGTTGCGGCCTTCCTACCAGTGGTCGCCATGC GCGCTGCCGCCGGGATCTCTTTTCAAGACGCCAGCGGTGAGACTCCTTTG CAATACAAACGTCGCCTTCTGAGTGTGGTGTTTGTTGTTGTTGAGCTGCT GCGCTGCTGTTGCTATCAAACTGTACGGCAAGCTATATACTGGTGCTGTA TGTCATTTGTCATTATTTGCATGCACGACATGATGGGTCTGCGTTTTGTT CGTTGCAACGGGGATTCTTGCGTGTGCTTTGAGCCCCGCAGCGTGAACCT TGGGAACTTTTGGTGCGTAAATAGAGCAAGTAAACACCGACAACGCAGGG CCTTCCGATTTCTTGCTGTTTCATGTCTATATGCTTTTGGTGCCGAATCA ATCTTTCTTTGTGTTGGACCCGCAAGTATCGGCTAGTGCCGTCTGTACAC CAGCAACAACAACAGTAGTTGGGGTGATTTCTTACTGGAACCTCCACCTC GATTCGCCTTTCAATGTACAGGGATGGTCGAGCAGGCCAAAGCGAGCCTT CGCGGTAGGCGCACCACGGAGGAGGTACGAAGCATTAGTCGCTTGTGTAG TGCTTCGTAAACGTAGTAACGGAGTGCGCGCGTTGGGATGCCTATTTGTG GTTGCGCGGACAACAGAGTGCCTTCATACTATGATAACTCATACTACGAG TACTGTCTTGTAGGGCTTTTTATCGCGACGTAAGGATTTGGTTGCTTTGA GGTATTTCGTTGCGTGCAAAGCAGTAAAATAAGTGCTTCCGAAGGGCTGC TTCGTACGGAGCGCCCTTTCCCTGCCCATGTCGTCGTGTGCACTTTGCTG ATCTGAAAGCGCATACTCCACTACCACGGCCGTTGTGTGCTTTCTCCACA TGCTCCAGCTTGGTCCGTCCATTGGTTTTCGTATCCTCCCCACTTTTCAC GAAACAAACGCCCCAATCTATCATACTGTAGGCTACAGTAGTAATATTAG AGTACGAGTATTACCTTTGTTTAGGGTCATACGAGTAGCTCTTAGCTCAT TGAGCTATATAACGCCTCCCCGCCCCACGCCTTCCCCTTTACTGCAACGA CTACCACCGCAGCCCAAGCCCAAGTTCTGCAACTCCATCGGCTGTCCGAA CAACTATACTCCCGTGCCTGAAGCGTGGAAAGTAAGATGTGAAGATGGCC GGTGCACCGAGGAGCAGTGCTGTCTGGCGATGTGCGCGTGCTTCCCCTGC CCCGACGGCTACATCCCCATCGAAGAGGTCAAATACGACCTCTGCTACGA CAACCGCTGCACCGAAAAGCAGTGCTGCGAGAAACGTGAGTGTATGCGAT TATGCCCTAGATTGCGTATAAAAGTACCTTGCAATTTGTTTTTGAGGTAA TACTTCGATGTATGTGCAAGATCATGTAGTGAAAGTTTAGCACCTGCACC AACTTTATCATGCCGTCGTCTTCAGTACGTAGCGTGGTTTGATATTGCCC CCTGAAAGGGTCTATATTAATCCACACAGCAGGGAAGCTCGCGATTATCC CCTCCCCCCCGCACAAGTTGCCGAAGTCCGCCTCACAAGTGGTTCTTAGT AGGATGCAGCTCACCCTTCATGCGAATCGCCGAACACCTCACGGCGCTTC GCGCTTGGTGCGCACGATGTCTGCCTGGTCGGCGAAAACCCGACGTGCTC CGTCCCAGCATTGTAGGGATGCGAGGGTCCGATGGTCATACGACTACGGG CATGCATGAAATGAGTAACCCCTCCCCCCCCCGCGCCGAACCAGTTTGAA ACTTCACGGCTGATAATGTATTGTATGTGGAAATAAAATAATAGCTATGC CTACCAAAAAGTGGAGTATTTGCATACAGCACATATTTGTGGGCCCTCAC CGTCAAAGGACAGGCTTTTAATTTCAGACGCTACATCCCCCCCATTGCTT ACTTCGGTGTCCTTGCGATGATGTGGTATTCGATTATTTTCGGCTCGTAC GATGGTGAAGGCTTGAGTGCTCCGGGCTGTTGCGATATCTAGGCCTTGAT TGTATTTTTGTTGCCACTCAAGTTGGGAATCACTCTCTCTCCCGCCGCGT CTCTGCCTAACTTTGCAGCGCGCCCGGTATGCTCCGAGGTGGCATGCAGC GACGGCTACGTTCCGATCGATGACGCGCAGCACACCAAGTGCGACAACGG CTACTGCAAGGAGAAGCAGTGCTGCAAGCGCCATGAGGCTAAGCGACGTG AGTCCCGGTGTTTTCCCTTTTTTTTGTATTCAAGATTTTCCTGACTATCA CTGTCTCCAGAGGCACGTGGCAATTTTTTTTTCTAGATACTGTACGAGGT TTACCGTGTGCATTTTTCGTATGTAAGCAGCATGATCAATTTTGGACTTT GACGGTCTTTTCAAGATGTATGATATTATAGCTGATCTACTACTAATTAT TGCGTTCCTTAAACGGGTGGGGGTTTATTCCTTGGTTCCTTGTCGCCACA CAGTAGCAAATTCACAGTAGAAAATTTTCAGACTTTTCTTGGCATAAATT GCATTGGCATCCCAATGGGAATAAAGATGACACAGCCCCCCTCCGATCTA GTATCTTGCCGCTATCCAACTGACGCAGCGTGGGCTCCATAAATATCTGC TTCCTGGTTGCCATATTAATGGTCGTTTGATTTTATCCATTTGTCCACGT CCAAATTTACGCTTCCTTTACCCTCACTGCCGCCCCATCGCCTATCCCTA AACCGCAGCGCGGGTCGAGCACTGTGACAAGTTCGACGTCAAGGATTGCC CCCGCGACTACTACCTCGTAGAATACCCTGAGCATGTGGAGTGCCACGAC GGCTACTGCAAAGCCGACAAGTGCTGCACCTACCGCAAGGAGCAGAAGCG CGAGCGTGAGGTGAAGTATTGCGACAGGTTCGACGCCAAAGACTGCCCCC GCGACTACTACCTCGTCGACTACCCCGAGCGTGTGGAGTGCCACGATGGC CGCTGCGAAGCCAGCAAGTGCTGCACCTACCGCAAGAAGGAGAAGCGCGA GCGTGAGGTGAAGTACTGCGACAAGTTCGACGCCAAGGACTGCCCCCGCG ACCACTACCTCGTCGACTACCCCGAGCGTGTGGAATGCCACGACGGCTAC TGCAAAGCCGACAAGTGCTGCACCTCCCGCAAGGAGGAGAAGCGCGAGCG TGAGGTGAAGTACTGCGACAAGTTCGACGCCAAAGATTGCCCCCGCGACC ACTACCTCGTCGACTACCCCGAGCGTGTGGAGTGCCACGACGGCTACTGC GAAGCCGACAAGTGCTGCACCTACCGCAAGGAGGAGAAGCATGAGCGTGA GGTTAAGCACTGCGACAGGTTCGACGCCAAAGACTGCCCCCGCGACCACT ACCTTGTCGACTACCCCGAGCGTGTGGAGTGCCACGACGGCTACTGCAAA GCCGACAAGTGCTGCACCTACCACAAGGAGGAGAAGCGCGAGCGTGAGGT GAAGTACTGCGACAAGTTCGACGCCACGGACTGCCCCCTTGACTACTATC TAGTCGACTACCCCGAGCGTGTGGAATGCCACGACGGCCACTGCAACTTC GACAAGTGCTGCACCTACCGCAAGGAGGAGAAGCGCGAACGTAAGGAGAA GCCCATGAAGAAATTCTGCAGGGACTTCGACTACTGCGGTCGTGACTACG AGCTGATTTACGACGCTGATATCGTGGAATGCTGGGAGGGCGTGTGCGAC GAGGACCAATGCTGCATGAAGCGTGAGTTAATATGTATGTGTTTTGAGCC TCACTTGTACATAGCGCTACTGGGATATTAGGATTGGTTTAGGCGCGCGA TATCGTTTTATTCGTGTCGGATTTGCCTCGTGGGTTGCTCATCAAATCAA ATGTATCATCGTACAGCCCCGCGCATCTACAAATATTTTGACATCAACGA CCCGATTCAGTCATCACAGACTAATCCATTCGCCACCCGTCCCCTCTACG CCGACGTACAACCTCAGGCCCCCGGGACCGCAAGGGAAAGAACGAGTTCG ACTACTGCTCCACGGTCTACTGCCCACACGACACGCACAGGCCCATCGAC GATGCCGACCGCAAGAAGTGCACGGTCAACGACCACGACAAAACCGACTC GTACCGCTCCGATGACTACCTGGCGACCGGCCACGGCTACTCGTACGATT ACTACGAAACCGACGACTACACAGACGAGCTCTACTTTTACAGCTACGAC TACTCTGACAGCGCGATGTGGAGCAGCGTAAGGAGTGACAGGGGGGTCAA GACCGTGTACTGCGATGTGGATAATTGCTGCCGCCGTATCGAATGTGAGA TTTTGCGCATTTGTTGTTTGCCCCTTTTCCAGTCGGGCACGTACTTCGAG AAGAATTGTTTACCAATCGAACGCGAGATGCCTATTCTTATGTGTGTCCC TCTTGGCAGTCGGCTACCACAGGTAGTGTTTACCATGACAATTTGTGTTC TATTACGGTAAGGTGTGTTTTTACATACATACAACCCGTGTTCGGTCCAC AACTACGACTACTGCTAATTTACATTCCAGGGAATCGCTCGCGTACCCTT TAACTTTATAATGGTTGCGTTATTATGACAGGGGAATTGTTGATGTTGCA TACTGTCAGCGGGATGTTTTTTAACAGGGTCGTTATTCTCAGCAGCTGTA CGGGACGGGGGCAGTTTCGAAATGTTTCGATAATACCTGTATGATATATA TATATATATATATATATATCATCGCTTGCTGCTAGTAGGTTCTGTGCCAC ACGTCGGGCTCATGCGCGCGGCGACGGGGGGGACTCGTGAGGATTTTGGT TTGTGGGCAAATAAATGTTGTCGTTGCCATGCGTGTGTGCTCACATGGTT GATCACCCCCCACGCGCCTTGCCGTCCGTTTCCCGCTTGTTTCGTGTTGT CCGAACATTGCAGATGGCCTCTTTGGCCCCGAGTAATCTCTCTCGGCATC GACAACATCATTGGTCATCGAACATCATGACACTGGTAGCTTAAGCTCTT GAAGAGCAAGCCCCTCAGGCTGGTTGTGGTGTGGAGAGCAGACAGGCAGA AGGGGTATGCGAATACTGTATAAGAACAATCGCTGCTGCTGTTCCTTGAG ATGCAGTCGGATTGTTCAAAATTTAACGTTGTTGGGAGAGGTATACTTGG AAGTATGTGCATACGTGATGAGGTAGGGGTTGCCCGTGTTCTTTACTTCG TGTACCGACAACATGTATTATGTGACGTGTTTGTTGTGGTGGGTGGTAGT GGGTTTGGTAGATTGCGGGTCGCAGCGATGTACATGGGGAAATACTTACG CTACTTGCAGCTGGAATACATAAATGAGAAGGTCAGGGCGGCTGGCTGAC TTTTTTTTTTTTTTGGTCTTTCAGGCCCTCTTTTGTTATGTCCGATGAAT TTTGTCAAGTTGTTACCGGCGTGCGCGGGGGGGGGGAGTCATGCGTTCAC GCAGTGATGGATGGACCCACACGTTTGAGTATGCCAAGTTTTTAGTTTTT GCATTATTTATATATATAGGCAGAAAAAGTTGTGTTATGCACACTGTCCA ATACGCGTTTGTAGCTCTTGAGCTAAGAACGTAAAGCTAATGATAGGGGG
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig10444:337..7136+

>mRNA_D-dudresnayi_contig10444.483.1 ID=mRNA_D-dudresnayi_contig10444.483.1|Name=mRNA_D-dudresnayi_contig10444.483.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=3720bp|location=Sequence derived from alignment at D-dudresnayi_contig10444:337..7136+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGATGAATCGAGCGTACGCCGCTGTTGCGGCCTTCCTACCAGTGGTCGC
CATGCGCGCTGCCGCCGGGATCTCTTTTCAAGACGCCAGCGATGATGAAT
CGAGCGTACGCCGCTGTTGCGGCCTTCCTACCAGTGGTCGCCATGCGCGC
TGCCGCCGGGATCTCTTTTCAAGACGCCAGCGGGATGGTCGAGCAGGCCA
AAGCGAGCCTTCGCGGTAGGCGCACCACGGAGGAGGGATGGTCGAGCAGG
CCAAAGCGAGCCTTCGCGGTAGGCGCACCACGGAGGAGCCCAAGCCCAAG
TTCTGCAACTCCATCGGCTGTCCGAACAACTATACTCCCGTGCCTGAAGC
GTGGAAAGTAAGATGTGAAGATGGCCGGTGCACCGAGGAGCAGTGCTGTC
TGGCGATGTGCGCGTGCTTCCCCTGCCCCGACGGCTACATCCCCATCGAA
GAGGTCAAATACGACCTCTGCTACGACAACCGCTGCACCGAAAAGCAGTG
CTGCGAGAAACCCCAAGCCCAAGTTCTGCAACTCCATCGGCTGTCCGAAC
AACTATACTCCCGTGCCTGAAGCGTGGAAAGTAAGATGTGAAGATGGCCG
GTGCACCGAGGAGCAGTGCTGTCTGGCGATGTGCGCGTGCTTCCCCTGCC
CCGACGGCTACATCCCCATCGAAGAGGTCAAATACGACCTCTGCTACGAC
AACCGCTGCACCGAAAAGCAGTGCTGCGAGAAACCGCGCCCGGTATGCTC
CGAGGTGGCATGCAGCGACGGCTACGTTCCGATCGATGACGCGCAGCACA
CCAAGTGCGACAACGGCTACTGCAAGGAGAAGCAGTGCTGCAAGCGCCAT
GAGGCTAAGCGACCGCGCCCGGTATGCTCCGAGGTGGCATGCAGCGACGG
CTACGTTCCGATCGATGACGCGCAGCACACCAAGTGCGACAACGGCTACT
GCAAGGAGAAGCAGTGCTGCAAGCGCCATGAGGCTAAGCGACCGCGGGTC
GAGCACTGTGACAAGTTCGACGTCAAGGATTGCCCCCGCGACTACTACCT
CGTAGAATACCCTGAGCATGTGGAGTGCCACGACGGCTACTGCAAAGCCG
ACAAGTGCTGCACCTACCGCAAGGAGCAGAAGCGCGAGCGTGAGGTGAAG
TATTGCGACAGGTTCGACGCCAAAGACTGCCCCCGCGACTACTACCTCGT
CGACTACCCCGAGCGTGTGGAGTGCCACGATGGCCGCTGCGAAGCCAGCA
AGTGCTGCACCTACCGCAAGAAGGAGAAGCGCGAGCGTGAGGTGAAGTAC
TGCGACAAGTTCGACGCCAAGGACTGCCCCCGCGACCACTACCTCGTCGA
CTACCCCGAGCGTGTGGAATGCCACGACGGCTACTGCAAAGCCGACAAGT
GCTGCACCTCCCGCAAGGAGGAGAAGCGCGAGCGTGAGGTGAAGTACTGC
GACAAGTTCGACGCCAAAGATTGCCCCCGCGACCACTACCTCGTCGACTA
CCCCGAGCGTGTGGAGTGCCACGACGGCTACTGCGAAGCCGACAAGTGCT
GCACCTACCGCAAGGAGGAGAAGCATGAGCGTGAGGTTAAGCACTGCGAC
AGGTTCGACGCCAAAGACTGCCCCCGCGACCACTACCTTGTCGACTACCC
CGAGCGTGTGGAGTGCCACGACGGCTACTGCAAAGCCGACAAGTGCTGCA
CCTACCACAAGGAGGAGAAGCGCGAGCGTGAGGTGAAGTACTGCGACAAG
TTCGACGCCACGGACTGCCCCCTTGACTACTATCTAGTCGACTACCCCGA
GCGTGTGGAATGCCACGACGGCCACTGCAACTTCGACAAGTGCTGCACCT
ACCGCAAGGAGGAGAAGCGCGAACGTAAGGAGAAGCCCATGAAGAAATTC
TGCAGGGACTTCGACTACTGCGGTCGTGACTACGAGCTGATTTACGACGC
TGATATCGTGGAATGCTGGGAGGGCGTGTGCGACGAGGACCAATGCTGCA
TGAAGCCGCGGGTCGAGCACTGTGACAAGTTCGACGTCAAGGATTGCCCC
CGCGACTACTACCTCGTAGAATACCCTGAGCATGTGGAGTGCCACGACGG
CTACTGCAAAGCCGACAAGTGCTGCACCTACCGCAAGGAGCAGAAGCGCG
AGCGTGAGGTGAAGTATTGCGACAGGTTCGACGCCAAAGACTGCCCCCGC
GACTACTACCTCGTCGACTACCCCGAGCGTGTGGAGTGCCACGATGGCCG
CTGCGAAGCCAGCAAGTGCTGCACCTACCGCAAGAAGGAGAAGCGCGAGC
GTGAGGTGAAGTACTGCGACAAGTTCGACGCCAAGGACTGCCCCCGCGAC
CACTACCTCGTCGACTACCCCGAGCGTGTGGAATGCCACGACGGCTACTG
CAAAGCCGACAAGTGCTGCACCTCCCGCAAGGAGGAGAAGCGCGAGCGTG
AGGTGAAGTACTGCGACAAGTTCGACGCCAAAGATTGCCCCCGCGACCAC
TACCTCGTCGACTACCCCGAGCGTGTGGAGTGCCACGACGGCTACTGCGA
AGCCGACAAGTGCTGCACCTACCGCAAGGAGGAGAAGCATGAGCGTGAGG
TTAAGCACTGCGACAGGTTCGACGCCAAAGACTGCCCCCGCGACCACTAC
CTTGTCGACTACCCCGAGCGTGTGGAGTGCCACGACGGCTACTGCAAAGC
CGACAAGTGCTGCACCTACCACAAGGAGGAGAAGCGCGAGCGTGAGGTGA
AGTACTGCGACAAGTTCGACGCCACGGACTGCCCCCTTGACTACTATCTA
GTCGACTACCCCGAGCGTGTGGAATGCCACGACGGCCACTGCAACTTCGA
CAAGTGCTGCACCTACCGCAAGGAGGAGAAGCGCGAACGTAAGGAGAAGC
CCATGAAGAAATTCTGCAGGGACTTCGACTACTGCGGTCGTGACTACGAG
CTGATTTACGACGCTGATATCGTGGAATGCTGGGAGGGCGTGTGCGACGA
GGACCAATGCTGCATGAAGCGCCCCCGGGACCGCAAGGGAAAGAACGAGT
TCGACTACTGCTCCACGGTCTACTGCCCACACGACACGCACAGGCCCATC
GACGATGCCGACCGCAAGAAGTGCACGGTCAACGACCACGACAAAACCGA
CTCGTACCGCTCCGATGACTACCTGGCGACCGGCCACGGCTACTCGTACG
ATTACTACGAAACCGACGACTACACAGACGAGCTCTACTTTTACAGCTAC
GACTACTCTGACAGCGCGATGTGGAGCAGCGTAAGGAGTGACAGGGGGGT
CAAGACCGTGTACTGCGATGTGGATAATTGCTGCCGCCGTATCGAATGCC
CCCGGGACCGCAAGGGAAAGAACGAGTTCGACTACTGCTCCACGGTCTAC
TGCCCACACGACACGCACAGGCCCATCGACGATGCCGACCGCAAGAAGTG
CACGGTCAACGACCACGACAAAACCGACTCGTACCGCTCCGATGACTACC
TGGCGACCGGCCACGGCTACTCGTACGATTACTACGAAACCGACGACTAC
ACAGACGAGCTCTACTTTTACAGCTACGACTACTCTGACAGCGCGATGTG
GAGCAGCGTAAGGAGTGACAGGGGGGTCAAGACCGTGTACTGCGATGTGG
ATAATTGCTGCCGCCGTATCGAATATGGCCTCTTTGGCCCCGAGTAAATG
GCCTCTTTGGCCCCGAGTAA
back to top