mRNA_D-dudresnayi_contig10443.480.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10443.480.1
Unique NamemRNA_D-dudresnayi_contig10443.480.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10443.480.1 vs. uniprot
Match: A0A482SU25_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SU25_9ARCH)

HSP 1 Score: 171 bits (433), Expect = 4.230e-48
Identity = 90/195 (46.15%), Postives = 130/195 (66.67%), Query Frame = 1
Query:    4 SGLDTKKFLQGLCTNDINKLSEKENCMPASLLTNKGRIFANTILYYISKDSDSSPRVILELHKDSCSEVRRYLTMYRLRSKVAIKPLPWSCNFIPGSNVSNTNNAVEIISF-VDPRIAGFGTRVLQPEDMLENKKISEDDNTAWYERYKLLYGLVDGPEVHNRIPLECNLDLLHYISFNKGCYVGQELTARTKFK 585
            SGLDTKKFLQGL +NDINKL+++   M  + LT KGRIF   +L+ I+ DS +   ++LE H+   ++++R+LT+Y+LRSKV I+   +      G+       A   +++ +DPR+   G R +  +  L     + D+   WYE   ++ G+V+GPEV NRIPLECNLDLL++I+F+KGCYVGQELTARTK+K
Sbjct:    5 SGLDTKKFLQGLSSNDINKLTQQYQSMATAFLTAKGRIFTTALLHNITPDSSAETTLLLETHQSHLNDLKRHLTLYKLRSKVKIESTSYQVAI--GAPQPEHMQAANALTYSLDPRLGSLGMRAVVEQGSLP----AVDER--WYEMRSIIEGVVEGPEVSNRIPLECNLDLLNHIAFDKGCYVGQELTARTKYK 191          
BLAST of mRNA_D-dudresnayi_contig10443.480.1 vs. uniprot
Match: UPI000719CB8A (putative transferase CAF17 homolog, mitochondrial isoform X1 n=2 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719CB8A)

HSP 1 Score: 141 bits (356), Expect = 5.020e-35
Identity = 83/228 (36.40%), Postives = 124/228 (54.39%), Query Frame = 1
Query:    1 ISGLDTKKFLQGLCTNDINKLSEK-----ENCMPASLLTNKGRIFANTILYYISKDSDSSPRVILELHKDSCSEVRRYLTMYRLRSKVAIKPLP-----WSCNFIPGSNVSNTNNAVEIISFVDPRIAGFGTRVL-----QPEDMLENKKISEDDNTAWYERYKLLYGLVDGPEVH---NRIPLECNLDLLHYISFNKGCYVGQELTARTKFKGLVRKRLVPFLLAEN 630
            + G D K  LQGL TND++ L+        NC+ + +L N+GR+  + I+Y + +D D     +LE  KD   +V ++L  Y+LR K  +  +      W+    P  +V+  +N   I   +DPR    G R++     Q  D++ N K+++D    WYE+ +   G+ +G   H      PLE N D L+ +SF KGCY+GQELTART+  G VRKRL+P  LAEN
Sbjct:   80 VVGPDAKALLQGLITNDMDCLNVDICPTINNCLYSLILNNQGRVLWDIIIYRLGEDKDKGQNYLLETDKDQVDDVLKHLKKYKLRKKADLFSMSDEMSVWAVASPPNESVTVASNKSHIFLNMDPRAPDLGYRLILASGTQASDVVTNCKVADDPQ--WYEKLRYRLGVGEGVVNHPPGKCFPLEANADYLNGVSFRKGCYIGQELTARTQHTGAVRKRLMPLTLAEN 305          
BLAST of mRNA_D-dudresnayi_contig10443.480.1 vs. uniprot
Match: UPI000C6EF8CE (putative transferase CAF17 homolog, mitochondrial n=2 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6EF8CE)

HSP 1 Score: 137 bits (344), Expect = 1.750e-33
Identity = 93/226 (41.15%), Postives = 119/226 (52.65%), Query Frame = 1
Query:    1 ISGLDTKKFLQGLCTNDINK-LSEKENCMPASLLTNKGRIFANTILYYISKDSDSSPRVILELHKDSCSEVRRYLTMYRLRSKV------------AIKPLPW-SCNFIPGSNVSN--TNNAVEIISFVDPRIAGFGTRVLQPEDMLENKKISEDDNTAWYERYKLLYGLVDGPEVH---NRIPLECNLDLLHYISFNKGCYVGQELTARTKFKGLVRKRLVPFLL 621
            +SG DT  +LQGL TNDI   L    +CM A  L  +GR+  +TILY IS  S  S   +LE      SE+ R+L +Y++R KV            A  PLPW S +  P    S+    N    +   DPR  G G R++ P + L  K  SE +    YE  +   G+ +G   H      PLECNLD LH ISF+KGCY+GQELTAR    G+VRKRL+P  L
Sbjct:   59 LSGPDTSAYLQGLITNDIGHFLHRSHSCMFAMFLNQQGRVLYDTILYKIS--SSPSEEFLLECDTTVVSELIRHLQLYKVRKKVEILPVSDKMVWSAFSPLPWDSLDVSPTMRCSDQLAKNLKATMILEDPRHVGLGYRIVLPANSLP-KLTSEKEIEDSYEELRYRLGIGEGIADHPPGKCFPLECNLDYLHGISFHKGCYIGQELTARIHHTGVVRKRLMPIRL 281          
BLAST of mRNA_D-dudresnayi_contig10443.480.1 vs. uniprot
Match: A0A835YHD8_9STRA (GCV_T domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHD8_9STRA)

HSP 1 Score: 133 bits (335), Expect = 7.130e-33
Identity = 82/227 (36.12%), Postives = 123/227 (54.19%), Query Frame = 1
Query:    1 ISGLDTKKFLQGLCTNDINKLSEKENCMPASLLTNKGRIFANTILYYISKDSDSSPRVILELHKDSCSEVRRYLTMYRLRSKVAIKPLPWSCNFIPGS-----------------NVSNTNNAVEIISFVDPRIAGFGTR-VLQPEDMLENKKISEDDNTAWYERYKLLYGLVDGPEVHNRIPLECNLDLLHYISFNKGCYVGQELTARTKFKGLVRKRLVPFLLAE 627
            I G+D  K LQGL T+D+++L    +C P   L  KGR+ A+ +L   +K  D+S   +L+       ++ R++ +Y+LRSK A+     S   + G                  N+     AV  IS +DPR +  G R ++  E   E          + Y+  +L +G+ +G E+  R PLEC+LDLL YISF KGCY+GQELTART FKG+VRKR++P ++ +
Sbjct:   13 IKGVDATKLLQGLVTSDVSRLQASSDCQPTVFLNTKGRVLADGLL---TKADDNS--YLLDCPLPVLQQLIRHIKVYKLRSKAAVTDCSNSLAVVVGGASLPDAPAAADFTTVLGNLRGLQGAV--ISSMDPRCSTLGARAIVSREVSWEGLGCCTRITESEYDTVRLSHGVAEGRELLERTPLECDLDLLGYISFTKGCYLGQELTARTHFKGVVRKRVLPVIITD 232          
BLAST of mRNA_D-dudresnayi_contig10443.480.1 vs. uniprot
Match: A0A653CPU2_CALMS (GCV_T domain-containing protein n=1 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653CPU2_CALMS)

HSP 1 Score: 133 bits (335), Expect = 1.840e-32
Identity = 94/261 (36.02%), Postives = 133/261 (50.96%), Query Frame = 1
Query:    1 ISGLDTKKFLQGLCTNDINKLSEKEN-CMPASLLTNKGRIFANTILYYISKDSDSSPRVILELHKDSCSEVRRYLTMYRLRSKVAIKPLPWSCNFIP----GSNVSNTNNAVEIISFVDPRIAGFGTRVLQPEDM--------LENKKISEDDNTAWYERYKLLYGLVDGPEVH---NRIPLECNLDLLHYISFNKGCYVGQELTARTKFKGLVRKRLVPFLLA--------ENASIRSTANSGPMEPLNADLMKKMIDID 711
            +SG D   +LQGL TNDIN LS+     + A LL  KGR+  +TI+Y   K SD     ++E  K     V R+L MY++R K+ I  L    N       G+++ +     ++  F DPRI   G R++    +        L    I E   +  Y RY L  G+ +G + H   N  PLECN D LH ISF+KGCY+GQELTART   G+VRKRL+P   +        ++A I  + N G +  +  D+   ++ ID
Sbjct:   34 VSGEDVTDYLQGLITNDINHLSKSPTGALYAMLLNTKGRVLYDTIVY---KTSDKV--YLIECEKQVVEPVARHLKMYKVRRKINIDNLQDEYNVYALINHGTSLESNIGVNDMHVFKDPRIQELGYRIVAENSVTVKDSISKLSTSTILEQKGSYKYLRYSL--GVGEGIQDHPPGNSFPLECNCDYLHGISFHKGCYIGQELTARTHHTGVVRKRLMPLYFSKLPTDKPKDDAIIHESTNLGKLRGIEGDVGLGLLRID 287          
BLAST of mRNA_D-dudresnayi_contig10443.480.1 vs. uniprot
Match: G4ZCL2_PHYSP (GCV_T domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZCL2_PHYSP)

HSP 1 Score: 131 bits (330), Expect = 2.400e-31
Identity = 103/383 (26.89%), Postives = 180/383 (47.00%), Query Frame = 1
Query:    1 ISGLDTKKFLQGLCTNDINKLSEKENCMPASLLTNKGRIFANTILYYISKDSDSSPRVILELHKDSCSEVRRYLTMYRLRSKVAIKP----------LPWSCN-----FIPGSNV----SNTNNAVEIISFVDPRIAGFGTRVLQPEDM-LENKKISEDDNTAWYERYKLLYGLVDGPEVHNRIPLECNLDLLHYISFNKGCYVGQELTARTKFKGLVRKRLVPFLL--AENASIRSTANSGPMEPLNAD---LMKKMIDIDYPQSCLKLP---ESVVSVGSSVYVDAVTTKSIGEVIHLDSTGTIGVAMIQQVVLQEESLVKSNFVVRAPIAKTGSVDPSDASAEGDLPASKTIDLDAPVSYISTFRPTWFQGLDERTGNVA 1065
            + G D  +F+Q + TND+  ++ + + +    L+ KGR+  +  +  ++ D+      +L+  +D    + ++   Y+LR KV I+           +P + +       P   V     + N   E + + DPR   FG R + P D  L   +  E   T+ Y  +++  G+ +G E+ + IPLECNLDLL  +SF KGCYVGQELTART+FKG +RKRLVP  L  AE+  +  T +    +P +A     +++ +        +K P   + +V+ G S        K++G + ++    +  +AM+                      + G + PS++ A   +PA K    D     +  ++P+W+  LD +TG + 
Sbjct:   21 LQGADAARFIQAVLTNDMKHVARRGDALYGGFLSTKGRVVGDCNVLQLADDA-----FLLDYDEDVAEALTKHWKRYKLRMKVKIEDKTDAYALYATVPAAVSEAGAALSPAEKVLDEMQSLNGGEETVVYADPRGEHFGVRAIVPIDSTLSLPEGYETMETSAYLDHRIALGVAEGKELVDGIPLECNLDLLKGVSFRKGCYVGQELTARTQFKGNIRKRLVPVALVPAEHQDVVKTLSELAFKPFDAPSHGALREYLADSKGWKDVKAPAIGDKIVATGES--------KAVGTIFNVAKDVSSAIAMM----------------------RLGHLLPSESEAGETVPAMKFSTQDGAFHAVP-YQPSWWPSLDVKTGKMV 367          
BLAST of mRNA_D-dudresnayi_contig10443.480.1 vs. uniprot
Match: UPI001BB0E981 (putative transferase CAF17, mitochondrial n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB0E981)

HSP 1 Score: 130 bits (326), Expect = 7.680e-31
Identity = 80/224 (35.71%), Postives = 127/224 (56.70%), Query Frame = 1
Query:    1 ISGLDTKKFLQGLCTNDINKLSEK--ENCMPASLLTNKGRIFANTILYYISKD-SDSSPRVILELHKDSCSEVRRYLTMYRLRSKVAIKPLP-----WSCNFIPGSNVSNTNNAVEIISFVDPRIAGFGTRVLQPED--MLENKKISEDDNTAWYERYKLLYGLVDGPEV---HNRIPLECNLDLLHYISFNKGCYVGQELTARTKFKGLVRKRLVPFLLAENA 633
            + G D    LQGL TNDI +L+++  ++ + +  L  +GR+  + + Y  S+D SD     +LE       E++++L MYR+R KV I  L      WS  F PG+  S    + + +SF DPR++G G RV+ P D  + + +++SED     Y  ++  +G+ +G +       +PLE NL  ++ +SF KGCY+GQELTART   G++RKR++P     NA
Sbjct:   75 VKGRDASDLLQGLMTNDIEQLNKEGGQDVIYSMFLNKQGRVLYDVLCYQWSRDESDEMLSFVLECDSAISQELQKHLKMYRIRKKVDITSLDSEYQVWSI-FSPGTTPSPGAKSGQSLSFTDPRVSGLGRRVIVPRDGQVPDVEEVSEDH----YRTHRYQWGVAEGVDELPPGECLPLESNLAYMNGVSFTKGCYLGQELTARTHHTGVIRKRIMPIQFTGNA 293          
BLAST of mRNA_D-dudresnayi_contig10443.480.1 vs. uniprot
Match: UPI00193A2B7C (putative transferase CAF17 homolog, mitochondrial n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A2B7C)

HSP 1 Score: 129 bits (323), Expect = 1.550e-30
Identity = 81/224 (36.16%), Postives = 132/224 (58.93%), Query Frame = 1
Query:    1 ISGLDTKKFLQGLCTNDINKLSEKENCMPASLLTNKGRIFANTILYYISKDSDSSPRVILELHKDSCSEVRRYLTMYRLRSKVAIKPLPWSCNFIPGSNVSNTNNAVE----IISFVDPRIAGFGTRVLQPEDMLENKK--ISEDDNTAWYERYKLLYGLVDGP---EVHNRIPLECNLDLLHYISFNKGCYVGQELTARTKFKGLVRKRLVPFLLAENASIRS 645
            + G D   FLQG+ TND+  L E + CM A +L   GRI  + +LY+   D+++  +V+LE    +   + + L +Y+LR K++I P   + + +   + ++ + + +    I S +DPR+   G R++  E+M E+    I+ D N   ++R+ +  G+ +GP        +PLECNLD ++ +SF+KGCY+GQELTARTKF G++RKRLVP  +    SI S
Sbjct:   54 LEGRDVTNFLQGIITNDVELLPEMK-CMYAMILNQHGRIMHDIMLYHQQHDTEN--KVLLECESSNSESIIKILKLYKLRKKLSITPRD-NLSVVQAMSGNSFHISPQFSNVITSAIDPRVPMLGHRLVV-ENMSESDSALINMDINAYHHKRHYI--GVPEGPLDLPPGTCLPLECNLDFMNGVSFHKGCYIGQELTARTKFTGVIRKRLVPVSIEGEGSIES 270          
BLAST of mRNA_D-dudresnayi_contig10443.480.1 vs. uniprot
Match: B4M005_DROVI (GCV_T domain-containing protein n=3 Tax=virilis group TaxID=32335 RepID=B4M005_DROVI)

HSP 1 Score: 128 bits (321), Expect = 2.870e-30
Identity = 89/241 (36.93%), Postives = 124/241 (51.45%), Query Frame = 1
Query:    1 ISGLDTKKFLQGLCTNDINKLSEKE--NCMPASLLTNKGRIFANTILYYISKDSDSSPRVILELHKDSCSEVRRYLTMYRLRSKVAIKPL-----PWSCNFIPGSNVSNTNNAVEIISFVDPRIAGFGTRVLQPEDMLENKKISED---------DNTAWYERYKLL---YGLVDGPEV---HNRIPLECNLDLLHYISFNKGCYVGQELTARTKFKGLVRKRLVPFLLAENASIRSTANS 657
            + G +   FLQGL TND+++L E    + M A  L   GR+  +TI+Y  + D D+    +LE  +D+ S+ RR+L MYR+R ++ I  +     PW      G     T+ A+++    DPR+   GTRVL P D L + K+S+D          N      YKLL    G+ +G E        PLE N D L+ +SFNKGCYVGQELTAR    G++RKR +P       S   T  S
Sbjct:   47 VHGAEVVPFLQGLVTNDVSRLQEANGPSSMYALFLNRGGRLMYDTIIYR-TNDPDT---FLLECDRDASSDFRRHLRMYRVRKRIDIDTVDDEYVPWVIFNENGRGDIRTHKAMDLFIAPDPRVGSMGTRVLAPAD-LNSTKLSKDLWRNHDVVAINPTPDSNYKLLRYKQGIGEGIEELPPGKCFPLEANADYLNGVSFNKGCYVGQELTARVHHSGVIRKRYMPIRFTAPVSSNQTVKS 282          
BLAST of mRNA_D-dudresnayi_contig10443.480.1 vs. uniprot
Match: A0A6P7G1D9_DIAVI (putative transferase CAF17 homolog, mitochondrial n=1 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7G1D9_DIAVI)

HSP 1 Score: 127 bits (320), Expect = 4.060e-30
Identity = 88/241 (36.51%), Postives = 124/241 (51.45%), Query Frame = 1
Query:    1 ISGLDTKKFLQGLCTNDINKLSEKENCMPASLLTNKGRIFANTILYYISKDSDSSPRVILELHKDSCSEVRRYLTMYRLRSKVAIKP--------LPWSCNFIPGSNVSNTNNAVE---------------IISFVDPRIAGFGTRVLQPEDMLENKKISED---DNTAWYERYKLL-YGLVDGPEVH-----NRIPLECNLDLLHYISFNKGCYVGQELTARTKFKGLVRKRLVPFLLAE 627
            +SG D+ +FLQGL TNDIN LS+  + M A  L  KGR+  ++I+Y    D+       LE+ K    ++ ++L MYR+R KV +          + +  N +   +V    N V+               +  F DPR+A  G R++   D+   K+IS     ++    E YK L Y L  G  V+     N  PLE N D LH +SF+KGCY+GQELTART   G+VRKRL+P L  E
Sbjct:   36 VSGNDSTEFLQGLVTNDINHLSQNFHSMYAMFLNTKGRVLYDSIIYKFETDNSYFIECDLEIEK----QLEKHLKMYRVRKKVDVTNACDKYQIYVLFRNNCLKTEDVQLEKNVVDSTAAQESAPLQTTKKMFIFKDPRVADLGYRIIAKNDVDIEKEISSSVIIESPTPEENYKYLRYSLGIGEGVNDLPVGNCFPLESNCDYLHGVSFHKGCYIGQELTARTHHTGVVRKRLMPLLFIE 272          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10443.480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482SU25_9ARCH4.230e-4846.15Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
UPI000719CB8A5.020e-3536.40putative transferase CAF17 homolog, mitochondrial ... [more]
UPI000C6EF8CE1.750e-3341.15putative transferase CAF17 homolog, mitochondrial ... [more]
A0A835YHD8_9STRA7.130e-3336.12GCV_T domain-containing protein n=1 Tax=Tribonema ... [more]
A0A653CPU2_CALMS1.840e-3236.02GCV_T domain-containing protein n=1 Tax=Callosobru... [more]
G4ZCL2_PHYSP2.400e-3126.89GCV_T domain-containing protein n=3 Tax=Phytophtho... [more]
UPI001BB0E9817.680e-3135.71putative transferase CAF17, mitochondrial n=1 Tax=... [more]
UPI00193A2B7C1.550e-3036.16putative transferase CAF17 homolog, mitochondrial ... [more]
B4M005_DROVI2.870e-3036.93GCV_T domain-containing protein n=3 Tax=virilis gr... [more]
A0A6P7G1D9_DIAVI4.060e-3036.51putative transferase CAF17 homolog, mitochondrial ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10443contigD-dudresnayi_contig10443:1048..2339 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score119.4
Seed ortholog evalue3.2e-24
Seed eggNOG ortholog67593.Physo129061
Preferred nameCAF17
KEGG rclassRC00002,RC00004,RC00014
KEGG koko:K01897,ko:K12613,ko:K14806,ko:K22073
KEGG TC4.C.1.1
KEGG ReactionR01280,R10815
KEGG Pathwayko00061,ko00071,ko01100,ko01212,ko02024,ko03018,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03018,map03320,map04146,map04216,map04714,map04920
KEGG ModuleM00086,M00395
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044237,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044572,GO:0051186,GO:0070013,GO:0071840
EggNOG free text desc.Aminomethyltransferase folate-binding domain
EggNOG OGs3QA8X@4776,COG0354@1,KOG2929@2759
EC3.6.1.62,3.6.4.13,6.2.1.3
COG Functional cat.K
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko01009,ko03009,ko03019,ko03029,ko04147
Hectar predicted targeting categoryother localisation
Exons3
Model size1116
Cds size993
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10443.480.1prot_D-dudresnayi_contig10443.480.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10443 1129..2297 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927545.7033515-UTR-D-dudresnayi_contig10443:1047..11281622927545.7033515-UTR-D-dudresnayi_contig10443:1047..1128Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10443 1048..1128 +
1690556801.1786292-UTR-D-dudresnayi_contig10443:1047..11281690556801.1786292-UTR-D-dudresnayi_contig10443:1047..1128Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10443 1048..1128 +
1622927545.7488644-UTR-D-dudresnayi_contig10443:2297..23391622927545.7488644-UTR-D-dudresnayi_contig10443:2297..2339Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10443 2298..2339 +
1690556801.2139974-UTR-D-dudresnayi_contig10443:2297..23391690556801.2139974-UTR-D-dudresnayi_contig10443:2297..2339Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10443 2298..2339 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927545.7158544-CDS-D-dudresnayi_contig10443:1128..14321622927545.7158544-CDS-D-dudresnayi_contig10443:1128..1432Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10443 1129..1432 +
1690556801.1904843-CDS-D-dudresnayi_contig10443:1128..14321690556801.1904843-CDS-D-dudresnayi_contig10443:1128..1432Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10443 1129..1432 +
1622927545.7261593-CDS-D-dudresnayi_contig10443:1519..17191622927545.7261593-CDS-D-dudresnayi_contig10443:1519..1719Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10443 1520..1719 +
1690556801.1977828-CDS-D-dudresnayi_contig10443:1519..17191690556801.1977828-CDS-D-dudresnayi_contig10443:1519..1719Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10443 1520..1719 +
1622927545.7357519-CDS-D-dudresnayi_contig10443:1808..22971622927545.7357519-CDS-D-dudresnayi_contig10443:1808..2297Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10443 1809..2297 +
1690556801.2056801-CDS-D-dudresnayi_contig10443:1808..22971690556801.2056801-CDS-D-dudresnayi_contig10443:1808..2297Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10443 1809..2297 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10443.480.1

>prot_D-dudresnayi_contig10443.480.1 ID=prot_D-dudresnayi_contig10443.480.1|Name=mRNA_D-dudresnayi_contig10443.480.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=331bp
MPASLLTNKGRIFANTILYYISKDSDSSPRVILELHKDSCSEVRRYLTMY
RLRSKVAIKPLPWSCNFIPGSNVSNTNNAVEIISFVDPRIAGFGTRVLQP
EDMLENKKISEDDNTAWYERYKLLYGLVDGPEVHNRIPLECNLDLLHYIS
FNKGCYVGQELTARTKFKGLVRKRLVPFLLAENASIRSTANSGPMEPLNA
DLMKKMIDIDYPQSCLKLPESVVSVGSSVYVDAVTTKSIGEVIHLDSTGT
IGVAMIQQVVLQEESLVKSNFVVRAPIAKTGSVDPSDASAEGDLPASKTI
DLDAPVSYISTFRPTWFQGLDERTGNVADL*
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mRNA from alignment at D-dudresnayi_contig10443:1048..2339+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10443.480.1 ID=mRNA_D-dudresnayi_contig10443.480.1|Name=mRNA_D-dudresnayi_contig10443.480.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1292bp|location=Sequence derived from alignment at D-dudresnayi_contig10443:1048..2339+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATTAGTGGATTAGATACAAAAAAGTTTCTACAAGGTCTCTGTACTAATGA TATTAACAAGCTAAGTGAGAAGGAGAATTGCATGCCTGCTTCTCTACTAA CCAATAAAGGAAGAATATTTGCGAATACTATTCTTTATTATATCAGCAAA GATAGCGATAGCTCACCTCGAGTAATTCTGGAGCTACACAAAGACTCATG TAGTGAAGTTCGGCGGTATCTCACTATGTATCGATTGCGCTCTAAAGTAG CAATCAAACCTCTGCCATGGAGTTGTAACTTTATTCCTGGAAGTAACGTT TCTAATACAAACAATGCTGTAGAGATAATAAGTTTTGTAGATCCTCGCAT AGCTGGATTTGGTACCAGAGTGCTTCAACCAGAAGGTAACTAAGTAATCC CAACTCGTTATTTCAATGGTGTAAGTGTTGTATGATATCTATTACCATAC ACACTAACTACTCTTTATATAGACATGCTAGAAAATAAAAAAATCTCAGA AGATGATAACACTGCTTGGTATGAGCGTTACAAGCTTCTTTATGGATTAG TGGATGGACCGGAAGTGCATAACCGGATCCCTTTGGAGTGCAACCTGGAC CTGCTGCACTACATCTCCTTCAACAAGGGCTGTTATGTCGGTCAGGAACT CACAGCGAGAACTAAATTCAAGGTTAGAAAATAATACAATATATAGTCAT ATTATATCTATAAATTATTGTGGTTTCTAATCTATAATTATCTTATTTCT TGCACTTACAGGGTCTGGTTCGTAAGCGCTTGGTACCCTTCCTCCTCGCA GAGAATGCGTCTATTCGCAGTACAGCTAACAGCGGACCTATGGAACCTCT CAATGCTGATCTAATGAAGAAAATGATTGACATTGACTATCCTCAGTCTT GTTTGAAGCTACCGGAATCAGTAGTGTCGGTGGGTTCATCTGTGTATGTG GATGCAGTAACTACTAAGAGTATTGGAGAAGTGATACATCTAGATAGTAC AGGTACAATAGGTGTAGCAATGATACAACAAGTTGTATTACAAGAAGAAT CACTAGTTAAGAGTAACTTTGTAGTGCGTGCTCCTATAGCTAAGACAGGC TCGGTTGACCCATCTGATGCCTCAGCAGAGGGTGACCTTCCAGCCAGCAA GACCATCGATCTAGACGCTCCTGTGTCATATATCTCTACTTTCCGACCCA CTTGGTTCCAAGGTTTAGATGAGAGAACAGGAAATGTTGCTGATCTATAG ATAGACAACGAGCAGTCAAAAGTCACCCCTTGTGTTTGGTTG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10443:1048..2339+

>mRNA_D-dudresnayi_contig10443.480.1 ID=mRNA_D-dudresnayi_contig10443.480.1|Name=mRNA_D-dudresnayi_contig10443.480.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1986bp|location=Sequence derived from alignment at D-dudresnayi_contig10443:1048..2339+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGCCTGCTTCTCTACTAACCAATAAAGGAAGAATATTTGCGAATACTAT
TCTTTATTATATCAGCAAAGATAGCGATAGCTCACCTCGAGTAATTCTGG
AGCTACACAAAGACTCATGTAGTGAAGTTCGGCGGTATCTCACTATGTAT
CGATTGCGCTCTAAAGTAGCAATCAAACCTCTGCCATGGAGTTGTAACTT
TATTCCTGGAAGTAACGTTTCTAATACAAACAATGCTGTAGAGATAATAA
GTTTTGTAGATCCTCGCATAGCTGGATTTGGTACCAGAGTGCTTCAACCA
GAAGATGCCTGCTTCTCTACTAACCAATAAAGGAAGAATATTTGCGAATA
CTATTCTTTATTATATCAGCAAAGATAGCGATAGCTCACCTCGAGTAATT
CTGGAGCTACACAAAGACTCATGTAGTGAAGTTCGGCGGTATCTCACTAT
GTATCGATTGCGCTCTAAAGTAGCAATCAAACCTCTGCCATGGAGTTGTA
ACTTTATTCCTGGAAGTAACGTTTCTAATACAAACAATGCTGTAGAGATA
ATAAGTTTTGTAGATCCTCGCATAGCTGGATTTGGTACCAGAGTGCTTCA
ACCAGAAGACATGCTAGAAAATAAAAAAATCTCAGAAGATGATAACACTG
CTTGGTATGAGCGTTACAAGCTTCTTTATGGATTAGTGGATGGACCGGAA
GTGCATAACCGGATCCCTTTGGAGTGCAACCTGGACCTGCTGCACTACAT
CTCCTTCAACAAGGGCTGTTATGTCGGTCAGGAACTCACAGCGAGAACTA
AATTCAAGACATGCTAGAAAATAAAAAAATCTCAGAAGATGATAACACTG
CTTGGTATGAGCGTTACAAGCTTCTTTATGGATTAGTGGATGGACCGGAA
GTGCATAACCGGATCCCTTTGGAGTGCAACCTGGACCTGCTGCACTACAT
CTCCTTCAACAAGGGCTGTTATGTCGGTCAGGAACTCACAGCGAGAACTA
AATTCAAGGGTCTGGTTCGTAAGCGCTTGGTACCCTTCCTCCTCGCAGAG
AATGCGTCTATTCGCAGTACAGCTAACAGCGGACCTATGGAACCTCTCAA
TGCTGATCTAATGAAGAAAATGATTGACATTGACTATCCTCAGTCTTGTT
TGAAGCTACCGGAATCAGTAGTGTCGGTGGGTTCATCTGTGTATGTGGAT
GCAGTAACTACTAAGAGTATTGGAGAAGTGATACATCTAGATAGTACAGG
TACAATAGGTGTAGCAATGATACAACAAGTTGTATTACAAGAAGAATCAC
TAGTTAAGAGTAACTTTGTAGTGCGTGCTCCTATAGCTAAGACAGGCTCG
GTTGACCCATCTGATGCCTCAGCAGAGGGTGACCTTCCAGCCAGCAAGAC
CATCGATCTAGACGCTCCTGTGTCATATATCTCTACTTTCCGACCCACTT
GGTTCCAAGGTTTAGATGAGAGAACAGGAAATGTTGCTGATCTATAGGGT
CTGGTTCGTAAGCGCTTGGTACCCTTCCTCCTCGCAGAGAATGCGTCTAT
TCGCAGTACAGCTAACAGCGGACCTATGGAACCTCTCAATGCTGATCTAA
TGAAGAAAATGATTGACATTGACTATCCTCAGTCTTGTTTGAAGCTACCG
GAATCAGTAGTGTCGGTGGGTTCATCTGTGTATGTGGATGCAGTAACTAC
TAAGAGTATTGGAGAAGTGATACATCTAGATAGTACAGGTACAATAGGTG
TAGCAATGATACAACAAGTTGTATTACAAGAAGAATCACTAGTTAAGAGT
AACTTTGTAGTGCGTGCTCCTATAGCTAAGACAGGCTCGGTTGACCCATC
TGATGCCTCAGCAGAGGGTGACCTTCCAGCCAGCAAGACCATCGATCTAG
ACGCTCCTGTGTCATATATCTCTACTTTCCGACCCACTTGGTTCCAAGGT
TTAGATGAGAGAACAGGAAATGTTGCTGATCTATAG
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