mRNA_D-dudresnayi_contig10442.479.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10442.479.1 vs. uniprot
Match: D7G3J2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3J2_ECTSI) HSP 1 Score: 520 bits (1338), Expect = 1.950e-172 Identity = 374/695 (53.81%), Postives = 446/695 (64.17%), Query Frame = 1 Query: 1 VSQVQCFDSTGTRLGFQPSESFGFLPVPDFLMEEATRNVEAVKANPNSKVYRGEREYTERREAVNEAGKIRVKIAPGGQYLSISGADVLPMLKNVAEKQGSRIALMKSMGLERPG-------GXXXXXXXXXXXXXXXRKREPLMREARYGVGSVLVEEGEEPTMVYVVVEGECRIVK-GKP-GRSHSAVKKGAKPSR-RSARYNLGSGRGSKVGVVLTSGFHTQASSTTMREGPVDVRHLGSLGPKALVGDIPVLLGGVQPASIVAKTPLRMLQCKAEKFAAHLDHNIRAKMVYVEAAKARKARMQERGAEVENLLSLGGTPLLVDVHAATAATTPSNELRHSGSNLGGTGTAV-----NETCTTITTAAAEGLSADAADVNATYSYPSDEKTPRGNETFATRT---------RSKIRDRAVGDIPV--------------EAATATTAGSINSSNDGKEVKVPRMPDSTSKEDNEEEGTEREPGCEGPLDAERLGARISASTPLLPCFSMGS--RLASRGPRGGAFTGAFDAAA---VAAMEGKIALSPSEAGGLLMERSSSSSSGGDVRELAISGGRAGVIVAAARG--------NMAEELLASHLTPFPTITKNRSLHAVSQPIVPHSEGFKDACRGESSRLGTAAWRVARAARFDGLVTPAERESIARQIEAGFETLQS---RRRVSPVA 1923 ++QVQCFDS+GTRL FQ E+FGFLPVP+ L+EEA R VE VK+NP SKVYRGEREY ER +A EAGKIRVKIAP GQYLSI+GA+V+PMLK +AE +G R LMKSMGLE PG G XXXXXXXXXXXRKRE LMREARYGVGS+LV EG PTMV+V+VEGECRIVK GKP +S S+ GAK S RSARYNLGS +GSKV VVLTSGFHTQ VDV LGSLGPKAL+GDIP LLGGVQPAS+VAKTPLR+LQC+A++FAAHL+HN RA+ VYVEAAKAR++RM ERG EVE L+SL GTPLLVD+ A +A+T+ S +H N TG N + T E +A AT + P+ T RG ++RT K AV +P ++ A T + N G S ++ + E + P G L+AER+ A +ASTP LPCFS+G+ +LA RG R G A VA+ E K+A ++A G +S+S+SG R L + G AG+ AA + A LLASHLTPFPTITKNRSLHAV+QPIV HSEGF DACRGE SR GT AWRVAR AR++GLV PA+R SI +QI+AGF+ LQ RRV PVA Sbjct: 120 LAQVQCFDSSGTRLEFQELETFGFLPVPEVLLEEAIRGVERVKSNPRSKVYRGEREYGERHQATTEAGKIRVKIAPDGQYLSINGAEVVPMLKKLAENRG-RSRLMKSMGLELPGMGGEGGFGGEVGXXXXXXXXXXXRKREALMREARYGVGSILVHEGASPTMVFVIVEGECRIVKSGKPCPQSQSS---GAKVSGGRSARYNLGSAQGSKVDVVLTSGFHTQ----------VDVCQLGSLGPKALIGDIPALLGGVQPASVVAKTPLRVLQCRADRFAAHLEHNARARKVYVEAAKARRSRMTERGGEVEQLVSLAGTPLLVDMSAGSASTS-SGPAKHPAGNSAQTGDEAAHGSSNTSDRTGRGGETERSTAGGKAAAATAANPT--STDRGRGRVSSRTDPSGTAKASSGKGIGPAVEPVPTHSGGSGHKESMRRSQSTPAATPVEEETRNTGTPADTTATARSATRRTSSSESS---PPTRG-LNAERIVA--TASTPQLPCFSLGTSPQLAFRGARPSPTVGPLHTPARKAVASSERKVASPMTDAIG-----ASASASGYRWRRLGV-GVEAGLAGTAAMATPALVTARDQASTLLASHLTPFPTITKNRSLHAVAQPIVKHSEGFADACRGERSRSGTEAWRVAREARYEGLVAPADRLSIMQQIDAGFDALQQGGRSRRVPPVA 785 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10442.479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10442.479.1 >prot_D-dudresnayi_contig10442.479.1 ID=prot_D-dudresnayi_contig10442.479.1|Name=mRNA_D-dudresnayi_contig10442.479.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=642bp VSQVQCFDSTGTRLGFQPSESFGFLPVPDFLMEEATRNVEAVKANPNSKVback to top mRNA from alignment at D-dudresnayi_contig10442:4222..10475- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10442.479.1 ID=mRNA_D-dudresnayi_contig10442.479.1|Name=mRNA_D-dudresnayi_contig10442.479.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=6254bp|location=Sequence derived from alignment at D-dudresnayi_contig10442:4222..10475- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10442:4222..10475- >mRNA_D-dudresnayi_contig10442.479.1 ID=mRNA_D-dudresnayi_contig10442.479.1|Name=mRNA_D-dudresnayi_contig10442.479.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=3852bp|location=Sequence derived from alignment at D-dudresnayi_contig10442:4222..10475- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |