mRNA_D-dudresnayi_contig10430.469.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10430.469.1 vs. uniprot
Match: A0A6H5KFM7_9PHAE (RING-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFM7_9PHAE) HSP 1 Score: 462 bits (1188), Expect = 6.520e-156 Identity = 262/449 (58.35%), Postives = 298/449 (66.37%), Query Frame = 3 Query: 3 CIYSMPINRCPYCDVEFGPDDGLFILPTEPYSAVTLFGEDERKGRDADHQSRTGRWHSYETMYAQRIVADFEDGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPDRPVGPEYVAKHQQAQKRLSDLEEMFLMAESQTNRGEANTQILSEKIQTEWRERFIGHAHTVNQKLKNAWDWNSSRKRADLSTGALTKLIYSINSTPHKGDIPVNHLAPMFLMAHNQEGGGGAAGSATAGHLTNASAS-SLAQAMGSVLQSWQQGQHAIHMFPSPNGDTSSAGATMTAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXSNTHQAFPSAMAQAR--QPANFDWLEQHHGPGNPVQGHPGHGHNHPAGA-EGMDDIEGFGEEIWTSLENNLASLGYQNSVAIEDMETDPINGSTSGPWPHA----QGQAGTFAEAPSGSTLDDSQVCV 1325 CIYSMPI RCP CD++FG DDGLFILP EPYSA F EDERKG D +HQSRTGRWHSYETMYAQRIVADF+ GTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCP RP+G E++AKH++AQKRLSDLEEMFLMAESQTNRG ANTQILSE IQ EWRERFIGHAHTVNQKLKNAWDWNSSR++A+LS+ AL+KL+ SI TP KG+ + HLAP+ L++ N + G G AT G + + SLAQA+G+V AF SAMAQ R A F WLEQ G G Q G G G+ EGMDD+EGFGEE+W+SLENNLASLGYQNSVAIEDM+ D +N +G W A QG G A + STLD+ Q+ + Sbjct: 102 CIYSMPIVRCPVCDMDFGNDDGLFILPVEPYSATNFFEEDERKGGDREHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEMFLMAESQTNRGVANTQILSECIQKEWRERFIGHAHTVNQKLKNAWDWNSSRRKAELSSDALSKLLSSI--TPSKGEQAMGHLAPLMLVSQNGDNNNGNQGQATGGAQGQGTQNVSLAQAVGNV----------------------------------------------------------------AFLSAMAQQRGGAGAGFSWLEQQTGQG--CQQRYGQGAPPMQGSHEGMDDMEGFGEELWSSLENNLASLGYQNSVAIEDMDQD-LNNQGNGQWTGALAQGQGTPGENTAAGTSSTLDEPQLFI 481
BLAST of mRNA_D-dudresnayi_contig10430.469.1 vs. uniprot
Match: D8LER0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER0_ECTSI) HSP 1 Score: 462 bits (1188), Expect = 7.030e-153 Identity = 291/450 (64.67%), Postives = 321/450 (71.33%), Query Frame = 3 Query: 3 CIYSMPINRCPYCDVEFGPDDGLFILPTEPYSAVTLFGEDERKGRDADHQSRTGRWHSYETMYAQRIVADFEDGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPDRPVGPEYVAKHQQAQKRLSDLEEMFLMAESQTNRGEANTQILSEKIQTEWRERFIGHAHTVNQKLKNAWDWNSSRKRADLSTGALTKLIYSINSTPHKGDIPVNHLAPMFLMAHNQEGGGGAAGSATAGHLTNASASSLAQAMGSVLQSWQQGQ--HAIHMFPSPNGDTSSAGATMTAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXSNTHQAFPSAMAQAR--QPANFDWLEQHHGPGNPVQGHPGHGHNHPAGA-EGMDDIEGFGEEIWTSLENNLASLGYQNSVAIEDMETDPINGSTSGPWPHA----QGQAGTFAEAPSGSTLDDSQVCV 1325 CIYSMPI RCP CD++FG DDGLFILP EPYSA LF EDERKGRDA+HQSRTGRWHSYETMYAQRIVADF+ GTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCP RP+G E++AKH++AQKRLSDLEEMFLMAESQTNRG ANTQILSE IQ EWRERFIGHAHTVNQKLKNAWDWNSSR++A+LS+ AL+K + GG G T H SL QAMG+V+QSWQQGQ H + FPS NGD XXXXXXXXXXXXXXXXXXXXXXXXXXX AF SAM Q R A F WLEQ G G Q G G G+ EGMDD+EGFGEE+W+SLENNLAS+GYQNSVAIEDM+ D +N +G W A QG G A + STLD+ Q+ + Sbjct: 102 CIYSMPIVRCPVCDMDFGNDDGLFILPVEPYSATNLFEEDERKGRDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEMFLMAESQTNRGVANTQILSECIQKEWRERFIGHAHTVNQKLKNAWDWNSSRRKAELSSDALSK----------------------------GQAAGGVQGQGT--HNV-----SLVQAMGNVIQSWQQGQGQHGMQRFPSANGDQXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLSAMTQQRGGAGAGFSWLEQQTGQG--CQQRHGQGAPQIQGSHEGMDDMEGFGEELWSSLENNLASMGYQNSVAIEDMDPD-LNNHGNGQWTGALAQGQGPLGENTTAGTSSTLDEPQLFI 512
BLAST of mRNA_D-dudresnayi_contig10430.469.1 vs. uniprot
Match: D8LLI7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLI7_ECTSI) HSP 1 Score: 308 bits (788), Expect = 1.610e-98 Identity = 164/251 (65.34%), Postives = 189/251 (75.30%), Query Frame = 3 Query: 3 CIYSMPINRCPYCDVEFGP--DDGLFILPTEPYS-AVTLFGEDERKGRD-----ADHQSRTGRWHSYETMYAQRIVADFEDGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPDRPVGPEYVAKHQQAQKRLSDLEEMFLMAESQTNRGEANTQILSEKIQTEWRERFIGHAHTVNQKLKNAWDWNSSRKRAD-----LSTGALTKLIYSINSTPHKG-DIPVNHLAPMFLMAHNQEGGGGA 713 CIY+MPI RCP CD F D GL ILP EP+S A GE E R A+ Q+RTGRWHS+ETMYAQRIVADF+ GT+PL EGTKLGN LCNILNCSPSRLSKKLKIGKK FQ+ DRP+ PE++A+H++AQKRLSDLEEMFLMAES+ NRG AN + LSE IQ EWRER + HA VNQ+LKNAWDWNSSRKRA+ LST AL KL+ +I TP++ D VNHLAP+FL HN +GGG A Sbjct: 57 CIYAMPITRCPVCDQAFPNTNDGGLLILPVEPFSDAGGATGESEDDSRTGAREGAETQTRTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLKIGKKCFQQREDRPMTPEHIARHREAQKRLSDLEEMFLMAESRANRGMANAETLSECIQKEWRERLVEHALAVNQRLKNAWDWNSSRKRAERKRAELSTNALNKLLSTI--TPNQSSDSTVNHLAPLFLTNHNADGGGAA 305
BLAST of mRNA_D-dudresnayi_contig10430.469.1 vs. uniprot
Match: A0A836CDJ8_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ8_9STRA) HSP 1 Score: 244 bits (624), Expect = 5.360e-75 Identity = 120/236 (50.85%), Postives = 158/236 (66.95%), Query Frame = 3 Query: 3 CIYSMPINRCPYCDVEFGPDDGLFILPTEPYSAVTLFGEDERKGRDADHQSRTGRWHSYETMYAQRIVADFEDGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPDRPVGPEYVAKHQQAQKRLSDLEEMFLMAESQTNRGEANTQILSEKIQTEWRERFIGHAHTVNQKLKNAWDWNSSRKRADLST----GALTKLIYSINSTPHK-----GDIPVNHLAPMFLM 683 CIY +P++ CP C + +GL +LP EP++ +AD + RTGRWH YET YAQ ++ DFE GT+P+ EGTKL LC +LNC+ +RLSKKLKIGK+++ P R PE +A H Q+R+S+LEEMFLMAE+QT RG T LSEK+QTEWRERF+GHAH++NQKLK+AW WNS R+ +DLST A+ KL+ SI T GD V+ +AP+FL+ Sbjct: 40 CIYQLPLSECPVCRADMTQSEGLQVLPVEPHN--------NEPAENADTELRTGRWHHYETQYAQHLMEDFEAGTLPIGEGTKLATLLCRLLNCNQTRLSKKLKIGKRFYAHGPTRIRTPEAIAAHSVRQRRISELEEMFLMAEAQTARGALTTPGLSEKMQTEWRERFVGHAHSMNQKLKDAWSWNSKRRVSDLSTTNTSAAINKLLSSIAPTSSSNSTGGGDFSVSPMAPLFLV 267
BLAST of mRNA_D-dudresnayi_contig10430.469.1 vs. uniprot
Match: A0A835ZCD8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCD8_9STRA) HSP 1 Score: 219 bits (557), Expect = 3.500e-61 Identity = 106/216 (49.07%), Postives = 148/216 (68.52%), Query Frame = 3 Query: 63 DGLFILPTEPYSAVTLFGEDERKGRDADHQSRTGRWHSYETMYAQRIVADFEDGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPDRPVGPEYVAKHQQAQKRLSDLEEMFLMAESQTNRGEANTQILSEKIQTEWRERFIGHAHTVNQKLKNAWDWNSSRKRADLSTGALTKLIYSINSTPHK---GDIPVNHLAPMFLMAHNQEG 701 +GL + +E +A+ + + D + RTGRWHSYET+YAQ ++ DFE GT+P+ EGTKL + LC +LNC+ +RLSKKLKIGK+++ P R E +A H+ Q+R+S+LEEMFLMAE QT RG A T ILSEK+Q EWRERF+ HAHTVNQKL++AW WNS+++ + A+TK + ++ P GD ++ +AP+FL+ H EG Sbjct: 37 EGLNLPDSEMLAALERAAQSGGERVVCDPELRTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEMFLMAEGQTVRGAATTPILSEKMQAEWRERFVAHAHTVNQKLRDAWSWNSNKRTGPSGSDAITKFLNTMVPQPGPQTGGDFALSPMAPLFLVQHTPEG 252
BLAST of mRNA_D-dudresnayi_contig10430.469.1 vs. uniprot
Match: A0A4D9CWS0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWS0_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.710e-12 Identity = 42/123 (34.15%), Postives = 70/123 (56.91%), Query Frame = 3 Query: 213 FEDGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPDRPVGPEYVAKHQQAQKRLSDLEEMFLMAESQTNRGEANTQILSEKIQTEWRERFIGHAHTVNQKLKNAWDWNSSRKRA 581 F G +PL +G++LG FLC++L C+ +RLS KL+ GK+ F+ D + E + +++Q Q++LS EE+FL S + S +Q EWR +F+ V ++ N +W++ K A Sbjct: 4 FGSGMLPLRDGSRLGTFLCSLLQCTSARLSSKLRTGKRNFRYLVDESISAESIFRYEQEQRQLSRREELFLHYLSPEEAA-----LASRSLQLEWRLQFLHLGKQVGVRVSNLHEWDAFLKTA 121
BLAST of mRNA_D-dudresnayi_contig10430.469.1 vs. uniprot
Match: A0A7S3MA57_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MA57_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.180e-9 Identity = 48/125 (38.40%), Postives = 67/125 (53.60%), Query Frame = 3 Query: 96 SAVTLFGEDERKGRDADHQSRTGRWHSYETMYAQRIVADFEDGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQRCPDRPVGPEYVAKHQ--QAQKRLSDLEEMFLMAESQTNRG 452 SA L+ DE+ + R G+W S E YA R++ +F+ G +PL+EGT L FL +LNC P R+SKK IGK+ F+R R E ++ Q Q+ L +LE FL + TNR Sbjct: 30 SANGLYTTDEKAKKAG---LRRGKWTSEEEAYANRLIYEFKQGLLPLTEGTTLRTFLSKLLNCDPMRISKKFVGANCIGKQVFRR---RQQELEKLSSDQIEVQQRELGELERKFLERVASTNRS 148
BLAST of mRNA_D-dudresnayi_contig10430.469.1 vs. uniprot
Match: A0A835YX50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX50_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 5.950e-9 Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 3 Query: 156 RTGRWHSYETMYAQRIVADFEDGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQR--CPDRPVGPEYVAKHQQAQKRLSDLEEMFLMAESQTNR 449 R G+W + E YA R++ +F++G +PL++GT L FL +LNC P R+SKK IGK+ F+R C + E + ++++ L DLE FL +QTN+ Sbjct: 188 RRGKWTTEEEAYANRLIHEFKNGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQCEIDKLTQEDM---ERSRNELQDLERQFLERVAQTNK 288
BLAST of mRNA_D-dudresnayi_contig10430.469.1 vs. uniprot
Match: A0A7S2PS41_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PS41_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 2.430e-8 Identity = 36/106 (33.96%), Postives = 53/106 (50.00%), Query Frame = 3 Query: 3 CIYSMPINRCPYCDVEFGPDDGLFILPTEPYSAVTLFGEDERKGRDADHQSRTGRWHSYETMYAQRIVADFEDGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIG 320 C + +CP+C+ + L + P E S V+ G + SR GRW +E + + F +G +PL GTKL +FL + L+C SRL+KKLK G Sbjct: 27 CFPAENFTQCPHCNTS---TNQLVLFPVEN-SNVSDDG--------SSSSSRVGRWTIHEEVVVDELSRFFNNGDLPLENGTKLNDFLSSFLDCKASRLTKKLKNG 120
BLAST of mRNA_D-dudresnayi_contig10430.469.1 vs. uniprot
Match: A0A1Z5JMG8_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMG8_FISSO) HSP 1 Score: 67.4 bits (163), Expect = 2.780e-8 Identity = 62/213 (29.11%), Postives = 94/213 (44.13%), Query Frame = 3 Query: 18 PINRCPYCDVEFGPDDGLFILPTE----------PYSAVTLFGED-ERKGRDADH-------QSRTGRWHSYETMYAQRIVADFEDGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGK---KYFQRCPDRPVGPEYVAKHQQAQKRLSDLEEMFLMAESQTNRGEANTQILSE---KIQTEWRERFIGHAHTVNQKLKNAWDWNSSRKRAD 584 P+ C C P +GL++ P S + G +RKG D + RTGRW + E Y +++ FE G +P+ +G+KL FL N+L SRL+KK+K K + F+R Y+ + + S+LEE F RG + Q +E +Q EWRE+F + Q L +A W +S + D Sbjct: 63 PLTTCTLCHK---PTNGLYLFPMSFREIDEAAKIASSLLDAKGRGRKRKGAPEDEFPGAYLTERRTGRWTTDEMAYCDKLIEKFEKGEVPIEDGSKLNEFLGNMLKSKQSRLTKKMKNAKLSTRLFKRLSG------YIETEEA--RFFSELEEAFY-------RGITDPQERAEIRFHMQKEWREQFSRVCAAIGQPL-DAEAWLNSVEEMD 256 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10430.469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10430.469.1 >prot_D-dudresnayi_contig10430.469.1 ID=prot_D-dudresnayi_contig10430.469.1|Name=mRNA_D-dudresnayi_contig10430.469.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=437bp MPINRCPYCDVEFGPDDGLFILPTEPYSAVTLFGEDERKGRDADHQSRTGback to top mRNA from alignment at D-dudresnayi_contig10430:812..9990- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10430.469.1 ID=mRNA_D-dudresnayi_contig10430.469.1|Name=mRNA_D-dudresnayi_contig10430.469.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=9179bp|location=Sequence derived from alignment at D-dudresnayi_contig10430:812..9990- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10430:812..9990- >mRNA_D-dudresnayi_contig10430.469.1 ID=mRNA_D-dudresnayi_contig10430.469.1|Name=mRNA_D-dudresnayi_contig10430.469.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2622bp|location=Sequence derived from alignment at D-dudresnayi_contig10430:812..9990- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |