mRNA_D-dudresnayi_contig10426.464.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10426.464.1
Unique NamemRNA_D-dudresnayi_contig10426.464.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10426.464.1 vs. uniprot
Match: A0A6H5KCD7_9PHAE (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCD7_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 2.480e-53
Identity = 95/127 (74.80%), Postives = 108/127 (85.04%), Query Frame = 2
Query:  164 AAEGAGEGRGVGVMQAVSDVAKLLESNYRQNTSKKLRLLDMFLVFAFATGVMQFVYCMLVGSFPFNSFLAGFMCSVGCFVLTVSLRMQVLEASENGGVVGGRSLERCFAEYVVCNMMLFLVVMNFMG 544
            A E  G     G M A+ +VAK L+SNYR+ T K+LR+LDMFL+F FATGV+QFVYC+LVGSFPFNSFLAGF  +VG FVLTVSLRMQV+EAS+NGGVV GRSLERCFAEYVVCNM+LFLVVMNFMG
Sbjct:    6 AGERGGREPAAGAMSAIGEVAKQLQSNYREITPKRLRMLDMFLLFVFATGVLQFVYCVLVGSFPFNSFLAGFSSTVGAFVLTVSLRMQVMEASDNGGVVRGRSLERCFAEYVVCNMVLFLVVMNFMG 132          
BLAST of mRNA_D-dudresnayi_contig10426.464.1 vs. uniprot
Match: A0A835YRC1_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRC1_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.680e-31
Identity = 66/111 (59.46%), Postives = 81/111 (72.97%), Query Frame = 2
Query:  212 VSDVAKLLESNYRQNTSKKLRLLDMFLVFAFATGVMQFVYCMLVGSFPFNSFLAGFMCSVGCFVLTVSLRMQVLEASENGGVVGGRSLERCFAEYVVCNMMLFLVVMNFMG 544
            VSD+   L+S+Y Q T+++LR+LD FL F   TGV Q VYC LVGSFPFNSFLAG MCSVG FVLTVSLR+ +  + +    +   S++  FAEYV CNM+LFL VMNFMG
Sbjct:    8 VSDIWSKLQSHYWQTTTQQLRVLDSFLAFTALTGVAQVVYCGLVGSFPFNSFLAGIMCSVGVFVLTVSLRLHLAPSGDGVAALRRDSVKNAFAEYVFCNMILFLAVMNFMG 118          
BLAST of mRNA_D-dudresnayi_contig10426.464.1 vs. uniprot
Match: T0PSD9_SAPDV (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0PSD9_SAPDV)

HSP 1 Score: 125 bits (314), Expect = 1.060e-30
Identity = 63/111 (56.76%), Postives = 83/111 (74.77%), Query Frame = 2
Query:  212 VSDVAKLLESNYRQNTSKKLRLLDMFLVFAFATGVMQFVYCMLVGSFPFNSFLAGFMCSVGCFVLTVSLRMQVLEASENGGVVGGRSLERCFAEYVVCNMMLFLVVMNFMG 544
            V+ +   L S Y +NT +K++L+D FL +  ATGV+QFVYCMLVG+FPFNSFL+GF+ +VG FVLTVSLRMQ+   + +      R+ ER FA+Y+ CN +LFLVVMNFMG
Sbjct:   15 VNGILSDLLSQYSKNTPRKMKLIDGFLAYVLATGVLQFVYCMLVGTFPFNSFLSGFISTVGVFVLTVSLRMQINPTNADAFSSAPRTPERAFADYLFCNFILFLVVMNFMG 125          
BLAST of mRNA_D-dudresnayi_contig10426.464.1 vs. uniprot
Match: A0A6G0XIX2_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIX2_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.600e-30
Identity = 60/104 (57.69%), Postives = 82/104 (78.85%), Query Frame = 2
Query:  233 LESNYRQNTSKKLRLLDMFLVFAFATGVMQFVYCMLVGSFPFNSFLAGFMCSVGCFVLTVSLRMQVLEASENGGVVGGRSLERCFAEYVVCNMMLFLVVMNFMG 544
            L + Y +NT +K++L+D FLV+  ATG++QFVYC+LVG+FPFNSFL+GF+ +VG FVLTVSLRMQ+  +++       RS +R FA+Y+ CN +LFLVVMNFMG
Sbjct:   25 LWTQYSKNTPRKVKLIDGFLVYVLATGILQFVYCVLVGTFPFNSFLSGFLSTVGVFVLTVSLRMQIDPSNQQAFAASPRSPQRAFADYLFCNCILFLVVMNFMG 128          
BLAST of mRNA_D-dudresnayi_contig10426.464.1 vs. uniprot
Match: F0W9F1_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W9F1_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.490e-30
Identity = 65/100 (65.00%), Postives = 80/100 (80.00%), Query Frame = 2
Query:  245 YRQNTSKKLRLLDMFLVFAFATGVMQFVYCMLVGSFPFNSFLAGFMCSVGCFVLTVSLRMQVLEASENGGVVGGRSLERCFAEYVVCNMMLFLVVMNFMG 544
            YR+ T KKL+LLD FL +  ATG++QFVYC+LVGSFPFNSFL+GF+C+VG FVLTVSLRMQV +AS        RS +R FA+Y+ CN++LFLVV NFMG
Sbjct:   26 YRKETPKKLQLLDGFLAYVLATGILQFVYCILVGSFPFNSFLSGFICTVGVFVLTVSLRMQV-DASNK---FTDRSEQRAFADYLFCNLILFLVVFNFMG 121          
BLAST of mRNA_D-dudresnayi_contig10426.464.1 vs. uniprot
Match: A0A485L3R2_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L3R2_9STRA)

HSP 1 Score: 124 bits (310), Expect = 4.260e-30
Identity = 60/104 (57.69%), Postives = 81/104 (77.88%), Query Frame = 2
Query:  233 LESNYRQNTSKKLRLLDMFLVFAFATGVMQFVYCMLVGSFPFNSFLAGFMCSVGCFVLTVSLRMQVLEASENGGVVGGRSLERCFAEYVVCNMMLFLVVMNFMG 544
            L S Y +NT +K++L+D FL +  ATGV+QF+YC+LVG+FPFNSFL+GF+ +VG FVLTVSLRMQ+  ++        RS +R FA+Y+ CN++LFLVVMNFMG
Sbjct:   25 LLSQYNKNTPRKIKLIDGFLAYVMATGVLQFLYCLLVGTFPFNSFLSGFIATVGVFVLTVSLRMQIDPSNAAAFAADPRSPQRAFADYLFCNLVLFLVVMNFMG 128          
BLAST of mRNA_D-dudresnayi_contig10426.464.1 vs. uniprot
Match: A0A3M6VA93_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VA93_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.100e-29
Identity = 64/112 (57.14%), Postives = 85/112 (75.89%), Query Frame = 2
Query:  206 QAVSDVAKLLESNYRQNTSKKLRLLDMFLVFAFATGVMQFVYCMLVGSFPFNSFLAGFMCSVGCFVLTVSLRMQVLEASENGGVVGGRSLERCFAEYVVCNMMLFLVVMNFM 541
            Q V  +   L + Y + TSKK++L+D FLV+  ATG++QF+YC+LVGSFPFNSFLAGF+C+VG FVL VSLRMQ+    EN    G R+ +R FA+Y++CN++LFLVV NFM
Sbjct:   12 QPVGSILGDLCTKYDKTTSKKIKLIDGFLVYVLATGLLQFIYCLLVGSFPFNSFLAGFVCTVGVFVLAVSLRMQI--NPENN--FGDRTEQRAFADYLLCNIILFLVVFNFM 119          
BLAST of mRNA_D-dudresnayi_contig10426.464.1 vs. uniprot
Match: K3WS81_GLOUD (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS81_GLOUD)

HSP 1 Score: 121 bits (303), Expect = 2.640e-29
Identity = 59/103 (57.28%), Postives = 80/103 (77.67%), Query Frame = 2
Query:  236 ESNYRQNTSKKLRLLDMFLVFAFATGVMQFVYCMLVGSFPFNSFLAGFMCSVGCFVLTVSLRMQVLEASENGGVVGGRSLERCFAEYVVCNMMLFLVVMNFMG 544
            ++ Y+Q T KK++L+D FL +  ATG++QF+YC+LVG+FPFNSFLAGF+C+VG FVL VSLRMQ+   +E       RS +R FA+Y+ CN++LFLVV NFMG
Sbjct:   15 QTKYQQTTPKKIKLIDGFLAYVLATGILQFIYCVLVGTFPFNSFLAGFVCTVGVFVLGVSLRMQINPENE----FKDRSEQRAFADYLFCNIILFLVVFNFMG 113          
BLAST of mRNA_D-dudresnayi_contig10426.464.1 vs. uniprot
Match: D0NLD6_PHYIT (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=15 Tax=Peronosporaceae TaxID=4777 RepID=D0NLD6_PHYIT)

HSP 1 Score: 120 bits (302), Expect = 4.000e-29
Identity = 61/102 (59.80%), Postives = 79/102 (77.45%), Query Frame = 2
Query:  239 SNYRQNTSKKLRLLDMFLVFAFATGVMQFVYCMLVGSFPFNSFLAGFMCSVGCFVLTVSLRMQVLEASENGGVVGGRSLERCFAEYVVCNMMLFLVVMNFMG 544
            S Y + T KK++L+D FL +  ATGV+QF+YC+LVG+FPFNSFLAGF+C+VG FVL VSLRMQ+    EN    G R+ +R FA+Y+ CN++LFLVV NFMG
Sbjct:   19 SKYDKTTPKKIKLIDGFLAYVLATGVLQFIYCLLVGNFPFNSFLAGFVCTVGVFVLAVSLRMQI--NPENN--FGDRTEQRAFADYLFCNIILFLVVFNFMG 116          
BLAST of mRNA_D-dudresnayi_contig10426.464.1 vs. uniprot
Match: A0A024G6Z8_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6Z8_9STRA)

HSP 1 Score: 120 bits (302), Expect = 4.640e-29
Identity = 61/100 (61.00%), Postives = 79/100 (79.00%), Query Frame = 2
Query:  245 YRQNTSKKLRLLDMFLVFAFATGVMQFVYCMLVGSFPFNSFLAGFMCSVGCFVLTVSLRMQVLEASENGGVVGGRSLERCFAEYVVCNMMLFLVVMNFMG 544
            YR+ T K+L+LLD FL +  ATG++QFVYC+LVG+FPFNSFL+GF+C+VG FVLTVSLRMQV   +E       R+ +R FA+Y+ CN++LFLVV NFMG
Sbjct:   26 YRKETPKQLQLLDGFLAYVLATGILQFVYCVLVGNFPFNSFLSGFICTVGVFVLTVSLRMQVDPTNE----FVDRTEQRAFADYLFCNLILFLVVFNFMG 121          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10426.464.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCD7_9PHAE2.480e-5374.80Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A835YRC1_9STRA1.680e-3159.46Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
T0PSD9_SAPDV1.060e-3056.76Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A6G0XIX2_9STRA1.600e-3057.69Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
F0W9F1_9STRA2.490e-3065.00Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A485L3R2_9STRA4.260e-3057.69Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A3M6VA93_9STRA2.100e-2957.14Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
K3WS81_GLOUD2.640e-2957.28Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
D0NLD6_PHYIT4.000e-2959.80Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A024G6Z8_9STRA4.640e-2961.00Dolichyl-diphosphooligosaccharide--protein glycosy... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10426contigD-dudresnayi_contig10426:3493..7222 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score125.2
Seed ortholog evalue2.4e-26
Seed eggNOG ortholog112098.XP_008621413.1
Preferred nameDAD1
KEGG koko:K12668
KEGG Pathwayko00510,ko00513,ko01100,ko04141,map00510,map00513,map01100,map04141
KEGG ModuleM00072
GOsGO:0001701,GO:0001824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0007275,GO:0007584,GO:0008150,GO:0008152,GO:0008250,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009790,GO:0009792,GO:0009987,GO:0009991,GO:0010941,GO:0012505,GO:0016020,GO:0016021,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0031224,GO:0031667,GO:0031984,GO:0032501,GO:0032502,GO:0032991,GO:0034645,GO:0036211,GO:0042175,GO:0042221,GO:0042493,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0060548,GO:0065007,GO:0070085,GO:0071704,GO:0098796,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.dolichyl-diphosphooligosaccharide-protein glycotransferase activity
EggNOG OGsKOG1746@1,KOG1746@2759
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionOligosaccharyltransferase, DAD1 subunit (or epsilon subunit)
Ec32 orthologEc-07_004230.1
Exons4
Model size1563
Cds size411
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10426.464.1prot_D-dudresnayi_contig10426.464.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10426 4509..6346 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927542.479755-UTR-D-dudresnayi_contig10426:3492..45081622927542.479755-UTR-D-dudresnayi_contig10426:3492..4508Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10426 3493..4508 -
1690556800.1611328-UTR-D-dudresnayi_contig10426:3492..45081690556800.1611328-UTR-D-dudresnayi_contig10426:3492..4508Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10426 3493..4508 -
1622927542.5371957-UTR-D-dudresnayi_contig10426:6346..63781622927542.5371957-UTR-D-dudresnayi_contig10426:6346..6378Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10426 6347..6378 -
1690556800.1991258-UTR-D-dudresnayi_contig10426:6346..63781690556800.1991258-UTR-D-dudresnayi_contig10426:6346..6378Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10426 6347..6378 -
1622927542.548802-UTR-D-dudresnayi_contig10426:7118..72221622927542.548802-UTR-D-dudresnayi_contig10426:7118..7222Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10426 7119..7222 -
1690556800.208273-UTR-D-dudresnayi_contig10426:7118..72221690556800.208273-UTR-D-dudresnayi_contig10426:7118..7222Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10426 7119..7222 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927542.4958515-CDS-D-dudresnayi_contig10426:4508..46451622927542.4958515-CDS-D-dudresnayi_contig10426:4508..4645Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10426 4509..4645 -
1690556800.175463-CDS-D-dudresnayi_contig10426:4508..46451690556800.175463-CDS-D-dudresnayi_contig10426:4508..4645Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10426 4509..4645 -
1622927542.510578-CDS-D-dudresnayi_contig10426:5204..52921622927542.510578-CDS-D-dudresnayi_contig10426:5204..5292Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10426 5205..5292 -
1690556800.1831694-CDS-D-dudresnayi_contig10426:5204..52921690556800.1831694-CDS-D-dudresnayi_contig10426:5204..5292Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10426 5205..5292 -
1622927542.5258842-CDS-D-dudresnayi_contig10426:6160..63461622927542.5258842-CDS-D-dudresnayi_contig10426:6160..6346Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10426 6161..6346 -
1690556800.191028-CDS-D-dudresnayi_contig10426:6160..63461690556800.191028-CDS-D-dudresnayi_contig10426:6160..6346Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10426 6161..6346 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10426.464.1

>prot_D-dudresnayi_contig10426.464.1 ID=prot_D-dudresnayi_contig10426.464.1|Name=mRNA_D-dudresnayi_contig10426.464.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=137bp
MAGPATTTAAAEGAGEGRGVGVMQAVSDVAKLLESNYRQNTSKKLRLLDM
FLVFAFATGVMQFVYCMLVGSFPFNSFLAGFMCSVGCFVLTVSLRMQVLE
ASENGGVVGGRSLERCFAEYVVCNMMLFLVVMNFMG*
back to top

mRNA from alignment at D-dudresnayi_contig10426:3493..7222-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10426.464.1 ID=mRNA_D-dudresnayi_contig10426.464.1|Name=mRNA_D-dudresnayi_contig10426.464.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=3730bp|location=Sequence derived from alignment at D-dudresnayi_contig10426:3493..7222- (Desmarestia dudresnayi DdudBR16 monoicous)
GCCGTGTTCCTGTCTCTGTCGCTCTCTGTGTGCCCTTCTTTAGGTGGATT AGTCTTTCGTTGAGCCCAAACGCTAGCCAGCTAACTGCAGTCAACACAGG AGAGGTGAATATCAATGTAACAATATATATCCGTGCGTTCAGGAGAATGT GTGGTCAATGTGCTATGTGCTCCGTTTTTCCCCGGTATTGATATTTGCCC GTTTTGCAATACGGAGGTTCACGGTAGCAGACACGAGTCCTCTTCGGATA CTGAACACCGTGCGCCGTCGCCGTCGCGCGTTGCAGTGTAGCACCTAGTT TGAGGTGCTCCGCTTATGGAAATGTGATTGATGAAATGTTGTGGACTATG ATTTGACTCTGTCGTTCGGCACTACCGATGTCTGCAAGTCTGCAAGAGTA CTACTGTCGGCACTTTTTGTTACGGATTGTCTCCGATAGAGATCTCGTGT GACACTTCGTACTACTACTACTGTACAATACTTGAGTACAGTACTTCAGT ACAATCACAAGTAGATAATACTCGTACAGCAGTGAAACCTCACCGCTGAA TGCTGAGAACCAACACCGTACTGTACCGTAGCCGCTACCATAGCATACAA GTATGCGTTCAGCTGCTGTCTTTATTGTCCTGCTGTGCAACAGATTTCTT ATTGTATGGTCGATGTCGGCATATAGGTCTACGTTCTACGTTTCCAATGC GTTTGTTTTTGTAGCGTTTGCCGGACTCCGCCACAAGGTGCTGTGCATTA TCATAGTTATCCTGTTGCACAAGGACCGACTGCTATACGTAACACTCCGT TGCCCGTGCACTCGCACTGCCTTCGCTTTCGCACCGCAACACAGACACAC CAGGGTTTGGTATAACCGCGGCGGCGATGGCGGGACCGGCGACAACAACA GCAGCAGCTGAGGGGGCAGGAGAAGGGCGGGGGGTAGGCGTGATGCAGGC TGTCAGCGACGTGGCGAAGTTGCTGGAGTCTAACTACCGGCAAAACACTT CCAAGAAGCTGCGACTGTTGGATATGTTCCTCGTATTTGCCTTCGCCACG GGAGTGATGCAGGTATCGCACAGGGTCCCCGGTGACCAACAAGCAAGAAA AAAATGTACGACAAGGAGAGGATAAATAGGTTTCCCTTCGTTTGAGGTTT ATCGCAAGTTTTCGGGTTTTTGAATCCGCTTGCGTCGTATAGCTACATGC TGTATATTATATCTAGAGAGGTGAATGTATTGTCCAAGTATTGTCGGTTA ATGGGTTTATCTGGAAGAACACGGTGATGGCATTCTCCAAGAGTGCGCCA AGCACCAGCCACATTCCATAGTCTACCCTGTCGGTAGCAGCTTGTGCTCA AGTTGCAAGGAAGCACGCAGAACTCGCGTGTGTATGCACTCAGCCTCGTG TGCTGCCGGCGGTGTGCTGCAAGAGGCACGGACACCCTGGTTGTCGTTAA AGCGGCGCGTGTCTTTTGTTGAGTTGAGTCGAAAAACGAAATCGAAGAAG GGAATATCGCGCTGAAGGCGCGTATAGTACGCGTAAGCACAATCCGACGC AAGCACGCCAGCGAGCGAAGGGGGTGCTGAACCAAGAGCGCGATAAAATA CCAATGCGGGCACTGGAGTAGGTGGAGGCGAGACATTCAACTCTATGACC CCGGGTCCGAATCAATAGTCCGCTAGTGGGACGACAACACAGTCGGCAGG AGGAAGACTTATTCTACAGACGGTACATCGCTCGCTCATCATGCTGGGAG CACCGCGCAGACTGGCTTGCCCACGCACCGCACCATAGTATGACCATATC GAAGCCTTTTCGTGTTTCTACATTGGTTCCACCGACCGCTTCTCTGACTG TACTACTGTTGTGTCTCTGCCCCCCCAACCTCGCTGTGTCTGTTTTCCCC GTTCTCTGTGACGTTTTTTTTTCCGGACAGTTCGTCTATTGCATGCTGGT GGGGTCGTTCCCGTTCAACTCGTTCCTCGCCGGATTCATGTGCTCCGTGG GGTGTTTTGTGTTAACAGGTGATGGAGCCGCGGTGATTTCATGTATACCT CTATAATACGAAGTTGGTACAGTGTTTCGGTATGCTGTGATTGCCTTGTC GCCCCGCAGTTGAGAGCGTTTTTTTTGTAACGTTTTTATCACACCAGAAG CAACGTTATTTTTCTCGAGCGGGTCATGTTCATGCACTGCAGGGGGCAGG GCAGGGGTGTTGTGATGGCAGGAGGTTGTACTTGCCCGTTCTTGTTGTCT TAACTTGCCCAGGGTGCGATTACTGCGGCACATCTATGAAGCTGTTGAGT TTACAACTATAAGTGCTGGCTGTGTTAATAGATATCATGTGTCGAACACT TGTACAGTAGATAATGCTACATATTTAGTATATTGCGATAAGGAATTTCA GATTGCTACTCCAACGTGCCTAACTTGGAGGCAAGGACTGCTGGCTAGCT TACCAGTACCGTCTTCGCCGTGCATGTACCTTAGCTCGCCCTCATCTAAT GGCACCGCGCTAACCCACCTTTCCTGCATCACGTGTGTGCATCGAATCAT CTCTGTTGCATGTGACCCTACGATCAGTGTCGTTGAGAATGCAGGTTCTG GAGGCAAGCGAGAATGGAGGGGTTGTGGGGGGGCGGTCGTTAGAGAGATG CTTCGCAGAATACGTGGTCTGCAACATGATGCTCTTCCTGGTGGTGATGA ACTTCATGGGATAGTGGCACTACTTGCTCCACAATTTTGTTTGTGTACCC CGTCTCATGCATTCGTCGCCGGTTGTTTATCGGCTTGCTTTTAAGTTTCG GGTGGTTTCCAAGTTTGTAGTTGGCATGTTTGTCGTGGAAGGCGGTGACT GCAAATGGTGTACGTTTACCTCTACCACAAGGAGAGCTGATAGGACTGAA TAGTGGCGACTGATCCGCCGTCATCTGCACAAGAAAGTAGCCCGGGTAGA ACGATAAGCTAAATTTTCGTGGCGTCTCACGTAGACTCGCAGGAGACTTT TTACGGAGCTCCGGGGGAAATGACAGCTGGGCGGCTTGTAGGCGCAGGCC ATCTTCTCCGCAGGCCGCTGTAGACCTTGGCGCGCAACTGTGGCTCAACG ATGTCTTGGCAGCGTCAGCACACACGTGATATATGTTGGACGTGTTGAGA ACGAAATTAGTGTTAACTGTCGGTGGATGTCGTGTTTTTCGTTCTTCGGA CGTTAGCGTAGTCAGTCTCAACCTGGTGGCCATTATCCCCTTTTTTTCTG CTTTTGCTGCTCCCAGCGCTCGTTCGTTTCTGGATGGGGCACACGGTATG ATGCCACTGGGATGGGATGGAAGGGCATCGCACCAAATGCGAGGTTTGAT TGCAGTAGCTATTTCGAAGCCGACGACGGCCTAACATCTCCCGATAATTT TGCTTGGGAAGACCCGGCTTGGTAGCTCTATGCTACTAGATTGGATACCG AAAGGGTTTCGATCGTGTTACTTTAGCTCGGTGTGAGAGTCTCTCGAGGG TGGCGATACCGAAGAACGAGCAGCACTTGTGACATTCAATAAATGAGGGC AGTGATTACACCTGTACGGTTACATACATCAGCGTCTACGATTACCTTGA GGAGGGTCCTAACGTGTTGGCGTTGAGGAGGGTGGAACCTTGACCTTTCT GGGAAAAACGGCGTTTGACCACGGCCACGCCCCATGAACATAACTCAACT GAACAATCTTGTATGGTCAGCAAGATCCTG
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig10426:3493..7222-

>mRNA_D-dudresnayi_contig10426.464.1 ID=mRNA_D-dudresnayi_contig10426.464.1|Name=mRNA_D-dudresnayi_contig10426.464.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=822bp|location=Sequence derived from alignment at D-dudresnayi_contig10426:3493..7222- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGCGGGACCGGCGACAACAACAGCAGCAGCTGAGGGGGCAGGAGAAGG
GCGGGGGGTAGGCGTGATGCAGGCTGTCAGCGACGTGGCGAAGTTGCTGG
AGTCTAACTACCGGCAAAACACTTCCAAGAAGCTGCGACTGTTGGATATG
TTCCTCGTATTTGCCTTCGCCACGGGAGTGATGCAGATGGCGGGACCGGC
GACAACAACAGCAGCAGCTGAGGGGGCAGGAGAAGGGCGGGGGGTAGGCG
TGATGCAGGCTGTCAGCGACGTGGCGAAGTTGCTGGAGTCTAACTACCGG
CAAAACACTTCCAAGAAGCTGCGACTGTTGGATATGTTCCTCGTATTTGC
CTTCGCCACGGGAGTGATGCAGTTCGTCTATTGCATGCTGGTGGGGTCGT
TCCCGTTCAACTCGTTCCTCGCCGGATTCATGTGCTCCGTGGGGTGTTTT
GTGTTAACAGTTCGTCTATTGCATGCTGGTGGGGTCGTTCCCGTTCAACT
CGTTCCTCGCCGGATTCATGTGCTCCGTGGGGTGTTTTGTGTTAACAGTG
TCGTTGAGAATGCAGGTTCTGGAGGCAAGCGAGAATGGAGGGGTTGTGGG
GGGGCGGTCGTTAGAGAGATGCTTCGCAGAATACGTGGTCTGCAACATGA
TGCTCTTCCTGGTGGTGATGAACTTCATGGGATAGTGTCGTTGAGAATGC
AGGTTCTGGAGGCAAGCGAGAATGGAGGGGTTGTGGGGGGGCGGTCGTTA
GAGAGATGCTTCGCAGAATACGTGGTCTGCAACATGATGCTCTTCCTGGT
GGTGATGAACTTCATGGGATAG
back to top