mRNA_D-dudresnayi_contig10423.459.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10423.459.1
Unique NamemRNA_D-dudresnayi_contig10423.459.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10423.459.1 vs. uniprot
Match: A0A7S3ATI5_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ATI5_9EUKA)

HSP 1 Score: 53.5 bits (127), Expect = 8.210e-7
Identity = 25/47 (53.19%), Postives = 28/47 (59.57%), Query Frame = 1
Query:   25 SQLRRCGWCNSLKESGQYSTCSKCKVVAYCNRDCQAKHWKAVHKSTC 165
            S L  C  C +    G+  TCS CK V YC+RDCQ KHWKA HK  C
Sbjct:  408 SPLHPCASCGA---GGKLMTCSLCKKVWYCSRDCQRKHWKASHKREC 451          
BLAST of mRNA_D-dudresnayi_contig10423.459.1 vs. uniprot
Match: A0A7S3MFG9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFG9_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.120e-6
Identity = 24/49 (48.98%), Postives = 28/49 (57.14%), Query Frame = 1
Query:   19 FTSQLRRCGWCNSLKESGQYSTCSKCKVVAYCNRDCQAKHWKAVHKSTC 165
            +  Q   C +C + K       C KCK+ AYCNRDCQ KHWK VHK  C
Sbjct:  226 YAEQRSTCAYCRT-KSPEILMKCGKCKIAAYCNRDCQVKHWK-VHKHQC 272          
BLAST of mRNA_D-dudresnayi_contig10423.459.1 vs. uniprot
Match: A0A067PRF8_9AGAM (MYND-type domain-containing protein n=1 Tax=Jaapia argillacea MUCL 33604 TaxID=933084 RepID=A0A067PRF8_9AGAM)

HSP 1 Score: 52.8 bits (125), Expect = 1.530e-6
Identity = 24/58 (41.38%), Postives = 33/58 (56.90%), Query Frame = 1
Query:    4 SHINCFTSQLR----RCGWCNSLKESGQYSTCSKCKVVAYCNRDCQAKHWKAVHKSTC 165
            SH++   ++ R     C +C    +SG+   CS CK V YC+R CQA H+KA HK  C
Sbjct:   30 SHLDEKNAEARLIKVHCSYCKKESDSGKLKICSHCKSVRYCDRTCQAAHYKARHKKDC 87          
BLAST of mRNA_D-dudresnayi_contig10423.459.1 vs. uniprot
Match: A0A8J9RZM1_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RZM1_9CHLO)

HSP 1 Score: 50.8 bits (120), Expect = 7.360e-6
Identity = 22/42 (52.38%), Postives = 27/42 (64.29%), Query Frame = 1
Query:   40 CGWCNSLKESGQYSTCSKCKVVAYCNRDCQAKHWKAVHKSTC 165
            C  C  L ++     CS CK+VAYC+R+CQ KHWKA HK  C
Sbjct:  417 CAQCGKLCDT--LLRCSACKLVAYCSRNCQVKHWKAGHKQVC 456          
BLAST of mRNA_D-dudresnayi_contig10423.459.1 vs. uniprot
Match: A0A6A4CFG7_9STRA (MYND-type domain-containing protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4CFG7_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 7.470e-6
Identity = 21/43 (48.84%), Postives = 27/43 (62.79%), Query Frame = 1
Query:   40 CGWCNSLKESGQ-YSTCSKCKVVAYCNRDCQAKHWKAVHKSTC 165
            C  C++    G+  STCS CK V YC+RDCQ  HWK +H+  C
Sbjct:  921 CAGCDNPAYPGEKLSTCSACKTVKYCSRDCQRTHWKRIHRHMC 963          
BLAST of mRNA_D-dudresnayi_contig10423.459.1 vs. uniprot
Match: A0A369JX92_HYPMA (MYND-type domain-containing protein n=1 Tax=Hypsizygus marmoreus TaxID=39966 RepID=A0A369JX92_HYPMA)

HSP 1 Score: 50.4 bits (119), Expect = 8.370e-6
Identity = 20/43 (46.51%), Postives = 27/43 (62.79%), Query Frame = 1
Query:   37 RCGWCNSLKESGQYSTCSKCKVVAYCNRDCQAKHWKAVHKSTC 165
            RC +CN L       TCS+C++V YC+++CQ K W A HK  C
Sbjct:    7 RCSYCNKLAGRQNLQTCSRCRMVRYCSKECQKKSW-ATHKKQC 48          
BLAST of mRNA_D-dudresnayi_contig10423.459.1 vs. uniprot
Match: A0A1Y2F5V2_9BASI (MYND-type domain-containing protein n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2F5V2_9BASI)

HSP 1 Score: 50.4 bits (119), Expect = 8.440e-6
Identity = 26/53 (49.06%), Postives = 32/53 (60.38%), Query Frame = 1
Query:   13 NCFTSQLRRCGWCNSLKESGQYSTCSKCKVVAYCNRDCQAKHWKAVHKSTCKQ 171
            NCFT+     G   +LK       CS+CK VAYC+ DCQ  HW+A HK+ CKQ
Sbjct:    8 NCFTTTR---GGTVTLK------LCSRCKKVAYCSVDCQTAHWRAQHKTDCKQ 51          
BLAST of mRNA_D-dudresnayi_contig10423.459.1 vs. uniprot
Match: A0A2A9PMA0_9HYPO (MYND-type zinc finger protein samB n=1 Tax=Ophiocordyceps unilateralis TaxID=268505 RepID=A0A2A9PMA0_9HYPO)

HSP 1 Score: 50.4 bits (119), Expect = 1.020e-5
Identity = 19/29 (65.52%), Postives = 22/29 (75.86%), Query Frame = 1
Query:   85 CSKCKVVAYCNRDCQAKHWKAVHKSTCKQ 171
            C  C +VAYCN DC+A+HWK VHK  CKQ
Sbjct:   53 CPNCHLVAYCNNDCRARHWKRVHKFDCKQ 81          
BLAST of mRNA_D-dudresnayi_contig10423.459.1 vs. uniprot
Match: A0A409XY18_9AGAR (Uncharacterized protein n=1 Tax=Gymnopilus dilepis TaxID=231916 RepID=A0A409XY18_9AGAR)

HSP 1 Score: 50.4 bits (119), Expect = 1.030e-5
Identity = 21/39 (53.85%), Postives = 27/39 (69.23%), Query Frame = 1
Query:   55 SLKESGQYSTCSKCKVVAYCNRDCQAKHWKAVHKSTCKQ 171
            S K  G+   CSKCK+V YC+++CQ KHW+  HK TC Q
Sbjct:  922 SCKNEGKL-VCSKCKLVLYCSKECQKKHWRKWHKQTCDQ 959          
BLAST of mRNA_D-dudresnayi_contig10423.459.1 vs. uniprot
Match: A0A067M6R8_9AGAM (MYND-type domain-containing protein n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067M6R8_9AGAM)

HSP 1 Score: 50.1 bits (118), Expect = 1.390e-5
Identity = 20/27 (74.07%), Postives = 24/27 (88.89%), Query Frame = 1
Query:   85 CSKCKVVAYCNRDCQAKHWKAVHKSTC 165
            CSKCK+V YC++DCQ+KHWK VHKS C
Sbjct:  129 CSKCKLVGYCSKDCQSKHWK-VHKSDC 154          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10423.459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A7S3ATI5_9EUKA8.210e-753.19Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S3MFG9_9STRA1.120e-648.98Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A067PRF8_9AGAM1.530e-641.38MYND-type domain-containing protein n=1 Tax=Jaapia... [more]
A0A8J9RZM1_9CHLO7.360e-652.38Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]
A0A6A4CFG7_9STRA7.470e-648.84MYND-type domain-containing protein n=4 Tax=Phytop... [more]
A0A369JX92_HYPMA8.370e-646.51MYND-type domain-containing protein n=1 Tax=Hypsiz... [more]
A0A1Y2F5V2_9BASI8.440e-649.06MYND-type domain-containing protein n=1 Tax=Leucos... [more]
A0A2A9PMA0_9HYPO1.020e-565.52MYND-type zinc finger protein samB n=1 Tax=Ophioco... [more]
A0A409XY18_9AGAR1.030e-553.85Uncharacterized protein n=1 Tax=Gymnopilus dilepis... [more]
A0A067M6R8_9AGAM1.390e-574.07MYND-type domain-containing protein n=1 Tax=Botryo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10423contigD-dudresnayi_contig10423:11..181 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Model size171
Cds size171
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927542.1535928-CDS-D-dudresnayi_contig10423:10..1811622927542.1535928-CDS-D-dudresnayi_contig10423:10..181Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10423 11..181 -
1690556800.0546594-CDS-D-dudresnayi_contig10423:10..1811690556800.0546594-CDS-D-dudresnayi_contig10423:10..181Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10423 11..181 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10423.459.1prot_D-dudresnayi_contig10423.459.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10423 11..181 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10423.459.1

>prot_D-dudresnayi_contig10423.459.1 ID=prot_D-dudresnayi_contig10423.459.1|Name=mRNA_D-dudresnayi_contig10423.459.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=57bp
MSHINCFTSQLRRCGWCNSLKESGQYSTCSKCKVVAYCNRDCQAKHWKAV
HKSTCKQ
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mRNA from alignment at D-dudresnayi_contig10423:11..181-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10423.459.1 ID=mRNA_D-dudresnayi_contig10423.459.1|Name=mRNA_D-dudresnayi_contig10423.459.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=171bp|location=Sequence derived from alignment at D-dudresnayi_contig10423:11..181- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGAGTCATATTAATTGTTTTACAAGCCAATTAAGACGATGTGGATGGTG TAACTCTCTCAAAGAATCTGGTCAATATTCTACTTGTAGTAAATGCAAAG TAGTTGCGTACTGTAATCGAGATTGTCAAGCTAAACATTGGAAAGCAGTA CACAAATCAACATGTAAACAA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10423:11..181-

>mRNA_D-dudresnayi_contig10423.459.1 ID=mRNA_D-dudresnayi_contig10423.459.1|Name=mRNA_D-dudresnayi_contig10423.459.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=342bp|location=Sequence derived from alignment at D-dudresnayi_contig10423:11..181- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGAGTCATATTAATTGTTTTACAAGCCAATTAAGACGATGTGGATGGTG
TAACTCTCTCAAAGAATCTGGTCAATATTCTACTTGTAGTAAATGCAAAG
TAGTTGCGTACTGTAATCGAGATTGTCAAGCTAAACATTGGAAAGCAGTA
CACAAATCAACATGTAAACAAATGAGTCATATTAATTGTTTTACAAGCCA
ATTAAGACGATGTGGATGGTGTAACTCTCTCAAAGAATCTGGTCAATATT
CTACTTGTAGTAAATGCAAAGTAGTTGCGTACTGTAATCGAGATTGTCAA
GCTAAACATTGGAAAGCAGTACACAAATCAACATGTAAACAA
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