mRNA_D-dudresnayi_contig10421.457.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10421.457.1 vs. uniprot
Match: A0A7S3GU06_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GU06_9STRA) HSP 1 Score: 248 bits (632), Expect = 2.060e-79 Identity = 131/261 (50.19%), Postives = 160/261 (61.30%), Query Frame = 1 Query: 1 PVTIKQLQTAERQNDTYIVDGRELNTVQIVGTFTDLVEHSTNIVFKINDGTDVLEGRQWIEKDTLKHNKITSLRPGSMVRVVGQIRDYEGNRHILAFEVFPLEDFNQLTHHLLDV---------------------------------------------------------------------------------YKVYTGRGSDNQEGLHISAAMNALRTQNVSLQPHELMNHVRQLCDDGRLYSTVDDEHHKPTSEDF 540 PVTIKQ+Q+A+RQ D YIVDGRE++TVQ+VGTF+ L EHSTNI+F++NDGT +LE RQWI+K++LKH K+ L+PGSMVRVVG IRDYEG++HIL FE+F +EDFNQLT+HLL+V Y+ YTGR S NQEGL + AA+ LRT+ V+LQPHEL+NHVRQLCDDGRLYST+DDEHHKPTSEDF Sbjct: 60 PVTIKQIQSADRQGDQYIVDGREIHTVQLVGTFSGLEEHSTNILFRLNDGTGLLECRQWIDKESLKHKKVAGLKPGSMVRVVGNIRDYEGSKHILVFEIFAVEDFNQLTNHLLNVVLTHCIHTKGPIPGDNSGANKPGIASNNFSSGSPAGRPTIGGSNNMXXXXXXXXXXNSMNQRGGSSLNAVKSETQGLTETIYQAYTGRSSANQEGLPLQAALQILRTKGVNLQPHELLNHVRQLCDDGRLYSTIDDEHHKPTSEDF 320
BLAST of mRNA_D-dudresnayi_contig10421.457.1 vs. uniprot
Match: A0A2P4XFE9_9STRA (Replication protein A 32 kDa subunit n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4XFE9_9STRA) HSP 1 Score: 103 bits (258), Expect = 9.340e-24 Identity = 50/121 (41.32%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 1 PVTIKQLQTAERQNDTYIVDGRELNTVQIVGTFTDLVEHSTNIVFKINDGTDVLEGRQWIEKDTL--KHNKITSLRPGSMVRVVGQIRDYEGNRHILAFEVFPLEDFNQLTHHLLDVYKVY 357 PV+IKQLQT +DT +DG+E++TV+++G T+L HST++ F+++DG+ + + ++ D ++ LR GS VRVVG++R ++G + F V P+ED N+LTHHLL+V V+ Sbjct: 46 PVSIKQLQTVNADDDTLRLDGQEVSTVRLIGLLTNLTPHSTSLRFQLDDGSGAFDCQYFVTADDADASEGEMNRLREGSYVRVVGKLRTFQGKASLSCFNVTPVEDMNELTHHLLEVIYVH 166
BLAST of mRNA_D-dudresnayi_contig10421.457.1 vs. uniprot
Match: A0A6A4DM97_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4DM97_9STRA) HSP 1 Score: 101 bits (252), Expect = 7.980e-23 Identity = 53/124 (42.74%), Postives = 81/124 (65.32%), Query Frame = 1 Query: 1 PVTIKQLQT---AERQNDTYIVDGRELNTVQIVGTFTDLVEHSTNIVFKINDGTDVLEGRQWIEKDT--LKHNKITSLRPGSMVRVVGQIRDYEGNRHILAFEVFPLEDFNQLTHHLLDVYKVY 357 PV+IKQLQT A +D +DG+EL+TV++VG ++L HSTN+ F+++DG+ + + ++ D ++ LR GS VRVVG++R ++G + F V PLED N+LTHHLL+V V+ Sbjct: 48 PVSIKQLQTLGGASGDDDALRLDGQELSTVRLVGLLSNLTPHSTNLRFQLDDGSGAFDCQYFVSGDDQDASEGEMNRLRDGSYVRVVGKLRSFQGKNSLSCFNVTPLEDLNELTHHLLEVVYVH 171
BLAST of mRNA_D-dudresnayi_contig10421.457.1 vs. uniprot
Match: K3W659_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W659_GLOUD) HSP 1 Score: 99.8 bits (247), Expect = 5.390e-22 Identity = 49/122 (40.16%), Postives = 79/122 (64.75%), Query Frame = 1 Query: 1 PVTIKQLQTAERQNDTYI-VDGRELNTVQIVGTFTDLVEHSTNIVFKINDGTDVLEGRQWIEKDT--LKHNKITSLRPGSMVRVVGQIRDYEGNRHILAFEVFPLEDFNQLTHHLLDVYKVY 357 P+T KQL + +D I +D +E+ V++VG +++V HSTN+ F+++DGT +++GR ++ D L ++I LR G VRVVG +R ++ + AF V P+EDFN++THH LD V+ Sbjct: 52 PITAKQLASRNASDDDVIRIDNQEVTNVKMVGILSNVVPHSTNVNFQLDDGTGIIDGRMFLHADDADLAESEIAKLRDGIYVRVVGNLRTFQEKVSLSAFSVTPIEDFNEITHHFLDAIYVH 173
BLAST of mRNA_D-dudresnayi_contig10421.457.1 vs. uniprot
Match: A0A024GRB7_9STRA (RPA_C domain-containing protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024GRB7_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 7.530e-22 Identity = 45/118 (38.14%), Postives = 79/118 (66.95%), Query Frame = 1 Query: 1 PVTIKQLQTAER-QNDTYIVDGRELNTVQIVGTFTDLVEHSTNIVFKINDGTDVLEGRQWIEKDTLKH--NKITSLRPGSMVRVVGQIRDYEGNRHILAFEVFPLEDFNQLTHHLLDV 345 P+T++QLQ ++ +D + VDGRE++ V+ VG +++ HSTN+ F+++DG+ +++GR ++ ++ L H N ++ L G V VGQ+R ++G + V P+EDFN +THH L+V Sbjct: 54 PITLRQLQAQDQVMDDVFRVDGREISMVKAVGILQNVIPHSTNVNFQLDDGSGIIDGRLFVAQEDLDHADNIMSRLHDGIYVSAVGQLRTFQGKTSFSCYSVVPIEDFNAMTHHFLEV 171
BLAST of mRNA_D-dudresnayi_contig10421.457.1 vs. uniprot
Match: A0A5D6XJQ9_9STRA (OB domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJQ9_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 2.120e-21 Identity = 48/122 (39.34%), Postives = 81/122 (66.39%), Query Frame = 1 Query: 1 PVTIKQLQTAERQNDTYI-VDGRELNTVQIVGTFTDLVEHSTNIVFKINDGTDVLEGRQWIEKDTLKH--NKITSLRPGSMVRVVGQIRDYEGNRHILAFEVFPLEDFNQLTHHLLDVYKVY 357 P+T KQL + +D I +DG+E+ V++VG +++V HSTN+ F+++DGT V++GR ++ + ++ +++ LR G VRVVG +R ++ + AF V P+EDFN++THH LD V+ Sbjct: 55 PITAKQLASRSTADDDVIRIDGQEVTNVKLVGILSNVVPHSTNVNFQLDDGTGVVDGRLFLHAEDGEYADSEVAKLRDGIYVRVVGNLRTFQEKVSLSAFAVTPIEDFNEVTHHFLDAIYVH 176
BLAST of mRNA_D-dudresnayi_contig10421.457.1 vs. uniprot
Match: A0A8K1CAN2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAN2_PYTOL) HSP 1 Score: 97.8 bits (242), Expect = 2.480e-21 Identity = 45/121 (37.19%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 1 PVTIKQLQTAERQNDTYIVDGRELNTVQIVGTFTDLVEHSTNIVFKINDGTDVLEGRQWIEKDTLK--HNKITSLRPGSMVRVVGQIRDYEGNRHILAFEVFPLEDFNQLTHHLLDVYKVY 357 PVT++QL Q+D VD E++++++VG ++ HSTN+ F+++DGT V+EGR ++ D + ++ R G VR VG +R ++ + F V P+EDFN++THH L+V V+ Sbjct: 52 PVTVRQLLNRTEQDDVIRVDNHEISSIKVVGILNNVSPHSTNVTFQLDDGTGVIEGRMFLHSDDVDFAEAEMAKFRDGIYVRAVGSLRTFQDKLSLSCFAVTPVEDFNEITHHFLEVIYVH 172
BLAST of mRNA_D-dudresnayi_contig10421.457.1 vs. uniprot
Match: H3GRD9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GRD9_PHYRM) HSP 1 Score: 97.4 bits (241), Expect = 3.130e-21 Identity = 54/139 (38.85%), Postives = 86/139 (61.87%), Query Frame = 1 Query: 1 PVTIKQLQT--AERQNDTYIVDGRELNTVQIVGTFTDLVEHSTNIVFKINDGTDVLEGRQWIEKDTL--KHNKITSLRPGSMVRVVGQIRDYEGNRHILAFEVFPLEDFNQLTHHLLDVYKV--YTGRGSDNQEGLHIS 399 PVTI+QL T A +D +DG+EL+TV++VG T+L HST++ F+++DG+ + + ++ D N++ L GS VRVVG++R ++G + F V P+ D N+LTHHLL+V V Y +G+ +Q +S Sbjct: 50 PVTIRQLLTLGASSDDDAQRLDGQELSTVRLVGLLTNLAPHSTSLRFQLDDGSGAFDCQYFVPADDADASENELNRLNEGSYVRVVGKLRSFQGKSSLSCFNVTPVVDLNELTHHLLEVVYVHCYNTKGALHQGSTDVS 188
BLAST of mRNA_D-dudresnayi_contig10421.457.1 vs. uniprot
Match: A0A2D4CEA7_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEA7_PYTIN) HSP 1 Score: 97.4 bits (241), Expect = 4.440e-21 Identity = 46/121 (38.02%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 1 PVTIKQLQTAERQNDTYIVDGRELNTVQIVGTFTDLVEHSTNIVFKINDGTDVLEGRQWIEKDTLKH--NKITSLRPGSMVRVVGQIRDYEGNRHILAFEVFPLEDFNQLTHHLLDVYKVY 357 PVT++QL +D+ VDG E++ V++VG ++V HSTN+ F+++DGT V++GR ++ D L+ +I LR G VR VG +R ++ + F + P+ DFN++THH L+ V+ Sbjct: 56 PVTVRQLLNRSETDDSIRVDGHEMSNVRVVGLLGNVVPHSTNVNFQLDDGTGVIDGRLFLHGDDLERAEEEIAKLRDGMYVRAVGSLRQFQDRLSLNCFTLTPITDFNEITHHFLETIYVH 176
BLAST of mRNA_D-dudresnayi_contig10421.457.1 vs. uniprot
Match: W2QP55_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2QP55_PHYPN) HSP 1 Score: 95.1 bits (235), Expect = 1.970e-20 Identity = 49/120 (40.83%), Postives = 80/120 (66.67%), Query Frame = 1 Query: 1 PVTIKQLQTAERQNDTYI-VDGRELNTVQIVGTFTDLVEHSTNIVFKINDGTDVLEGRQWIEKDTLKHNKITSLRPGSMVRVVGQIRDYEGNRHILAFEVFPLEDFNQLTHHLLDVYKVY 357 PVTIKQLQ+ +D + +DG+E++TV++VG T+L HST++ F+++DG+ + + ++ D + LR GS VRVVG++R ++G + F V P++D N+LTHHLL+V V+ Sbjct: 45 PVTIKQLQSLNTGDDDAVRLDGQEVSTVRLVGLLTNLTPHSTSLRFQLDDGSGSFDCQYFVNAD--EDASEGDLREGSYVRVVGKLRSFQGKSSLSCFNVVPVQDMNELTHHLLEVIYVH 162 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10421.457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10421.457.1 >prot_D-dudresnayi_contig10421.457.1 ID=prot_D-dudresnayi_contig10421.457.1|Name=mRNA_D-dudresnayi_contig10421.457.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=181bp PVTIKQLQTAERQNDTYIVDGRELNTVQIVGTFTDLVEHSTNIVFKINDGback to top mRNA from alignment at D-dudresnayi_contig10421:9813..10975- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10421.457.1 ID=mRNA_D-dudresnayi_contig10421.457.1|Name=mRNA_D-dudresnayi_contig10421.457.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1163bp|location=Sequence derived from alignment at D-dudresnayi_contig10421:9813..10975- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10421:9813..10975- >mRNA_D-dudresnayi_contig10421.457.1 ID=mRNA_D-dudresnayi_contig10421.457.1|Name=mRNA_D-dudresnayi_contig10421.457.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1086bp|location=Sequence derived from alignment at D-dudresnayi_contig10421:9813..10975- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |