mRNA_D-dudresnayi_contig104.433.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig104.433.1
Unique NamemRNA_D-dudresnayi_contig104.433.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig104.433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig104contigD-dudresnayi_contig104:35222..35593 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons2
Model size278
Cds size240
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig104.433.1prot_D-dudresnayi_contig104.433.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig104 35239..35572 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927539.405444-UTR-D-dudresnayi_contig104:35221..352381622927539.405444-UTR-D-dudresnayi_contig104:35221..35238Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig104 35222..35238 -
1690556798.9856837-UTR-D-dudresnayi_contig104:35221..352381690556798.9856837-UTR-D-dudresnayi_contig104:35221..35238Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig104 35222..35238 -
1622927539.4444072-UTR-D-dudresnayi_contig104:35572..355931622927539.4444072-UTR-D-dudresnayi_contig104:35572..35593Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig104 35573..35593 -
1690556799.0125933-UTR-D-dudresnayi_contig104:35572..355931690556799.0125933-UTR-D-dudresnayi_contig104:35572..35593Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig104 35573..35593 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927539.4181015-CDS-D-dudresnayi_contig104:35238..353001622927539.4181015-CDS-D-dudresnayi_contig104:35238..35300Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig104 35239..35300 -
1690556798.9972155-CDS-D-dudresnayi_contig104:35238..353001690556798.9972155-CDS-D-dudresnayi_contig104:35238..35300Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig104 35239..35300 -
1622927539.4304202-CDS-D-dudresnayi_contig104:35394..355721622927539.4304202-CDS-D-dudresnayi_contig104:35394..35572Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig104 35395..35572 -
1690556799.005266-CDS-D-dudresnayi_contig104:35394..355721690556799.005266-CDS-D-dudresnayi_contig104:35394..35572Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig104 35395..35572 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig104.433.1

>prot_D-dudresnayi_contig104.433.1 ID=prot_D-dudresnayi_contig104.433.1|Name=mRNA_D-dudresnayi_contig104.433.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=80bp
MLSRQYMMVGVAAAGTLPLVMIAMNRGTVPKARKMSTAADGEKSPDMMNN
TLKTRESLKGKLPIKAAKRHDHDEGHDEN*
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mRNA from alignment at D-dudresnayi_contig104:35222..35593-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig104.433.1 ID=mRNA_D-dudresnayi_contig104.433.1|Name=mRNA_D-dudresnayi_contig104.433.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=372bp|location=Sequence derived from alignment at D-dudresnayi_contig104:35222..35593- (Desmarestia dudresnayi DdudBR16 monoicous)
ATTATTCTATTAATTTCTAAGATGTTGAGCAGACAATATATGATGGTAGG
AGTTGCAGCAGCAGGTACACTGCCTTTAGTAATGATTGCAATGAATCGTG
GTACTGTTCCTAAAGCCCGTAAAATGTCTACTGCTGCTGATGGAGAAAAG
TCACCTGATATGATGAATAATACTTTGAAGACTCGAGAATCGTTGAAGGG
TAAGGCGAATCATCATTCGTTCTATGTTCATCAAAAACTGGAGGATCCGA
AGAATACTTAAATCACAGTCTTGTTTTGACTCGTGTTACTTAGGGAAACT
ACCCATCAAAGCAGCTAAAAGACACGATCATGATGAGGGTCATGATGAGA
ATTAACAAAATTTGATAAACTG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig104:35222..35593-

>mRNA_D-dudresnayi_contig104.433.1 ID=mRNA_D-dudresnayi_contig104.433.1|Name=mRNA_D-dudresnayi_contig104.433.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=480bp|location=Sequence derived from alignment at D-dudresnayi_contig104:35222..35593- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTTGAGCAGACAATATATGATGGTAGGAGTTGCAGCAGCAGGTACACT
GCCTTTAGTAATGATTGCAATGAATCGTGGTACTGTTCCTAAAGCCCGTA
AAATGTCTACTGCTGCTGATGGAGAAAAGTCACCTGATATGATGAATAAT
ACTTTGAAGACTCGAGAATCGTTGAAGGATGTTGAGCAGACAATATATGA
TGGTAGGAGTTGCAGCAGCAGGTACACTGCCTTTAGTAATGATTGCAATG
AATCGTGGTACTGTTCCTAAAGCCCGTAAAATGTCTACTGCTGCTGATGG
AGAAAAGTCACCTGATATGATGAATAATACTTTGAAGACTCGAGAATCGT
TGAAGGGGAAACTACCCATCAAAGCAGCTAAAAGACACGATCATGATGAG
GGTCATGATGAGAATTAAGGAAACTACCCATCAAAGCAGCTAAAAGACAC
GATCATGATGAGGGTCATGATGAGAATTAA
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