mRNA_D-dudresnayi_contig104.432.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig104.432.1
Unique NamemRNA_D-dudresnayi_contig104.432.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig104.432.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig104contigD-dudresnayi_contig104:20358..21038 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons1
Model size682
Cds size681
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927539.7232695-CDS-D-dudresnayi_contig104:20357..210381622927539.7232695-CDS-D-dudresnayi_contig104:20357..21038Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig104 20358..21038 +
1690556799.0857952-CDS-D-dudresnayi_contig104:20357..210381690556799.0857952-CDS-D-dudresnayi_contig104:20357..21038Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig104 20358..21038 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig104.432.1prot_D-dudresnayi_contig104.432.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig104 20358..21038 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig104.432.1

>prot_D-dudresnayi_contig104.432.1 ID=prot_D-dudresnayi_contig104.432.1|Name=mRNA_D-dudresnayi_contig104.432.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=227bp
VGYCWKYLVHKPARRSAIARRHSDNAAAVQHWNASRRSNASAGFLSNIQT
VLTNMAFYLTRPTKLFTAMVTGWYSVNDPQEERDWCAMNRPANLQAFVSA
GVASDNTDNMTESSTLAARAAMRTTIPVEVVQIICAARDEVVYPWAGPAT
RVVSSNNPYVSSMLQGSLTPTAPSQSQLQHVAPTSAVVPEGEVLTRPEDA
VALILRLYRDHVKANEMSLVDPDDSAE
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mRNA from alignment at D-dudresnayi_contig104:20358..21038+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig104.432.1 ID=mRNA_D-dudresnayi_contig104.432.1|Name=mRNA_D-dudresnayi_contig104.432.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=681bp|location=Sequence derived from alignment at D-dudresnayi_contig104:20358..21038+ (Desmarestia dudresnayi DdudBR16 monoicous)
GTTGGCTACTGCTGGAAGTACCTGGTGCATAAGCCTGCTCGTCGTTCTGC
TATTGCTCGTAGACACAGCGACAACGCTGCTGCAGTACAGCACTGGAATG
CGTCTCGCCGCAGCAATGCCAGTGCAGGCTTCCTGTCTAACATTCAGACT
GTGCTCACCAATATGGCTTTCTATTTGACCCGCCCGACCAAGCTGTTCAC
CGCCATGGTAACAGGCTGGTACTCAGTCAACGACCCACAGGAAGAGCGCG
ACTGGTGCGCCATGAACCGCCCTGCCAATCTGCAAGCTTTCGTGTCTGCT
GGTGTTGCCTCAGATAACACTGATAATATGACTGAATCATCCACCCTCGC
TGCCCGCGCTGCGATGCGCACTACTATTCCTGTGGAAGTAGTGCAGATCA
TCTGTGCGGCAAGAGATGAAGTTGTGTATCCTTGGGCTGGACCAGCTACC
AGAGTGGTCAGCTCGAATAATCCTTATGTGAGCTCGATGCTGCAGGGTAG
TTTGACTCCCACCGCTCCATCACAATCCCAGCTGCAGCACGTCGCCCCCA
CCTCTGCTGTTGTCCCTGAGGGTGAGGTGTTGACTCGCCCTGAAGATGCT
GTGGCCCTCATTCTGCGTCTGTATCGCGACCACGTCAAGGCCAACGAGAT
GAGTCTGGTGGACCCCGATGACTCCGCCGAG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig104:20358..21038+

>mRNA_D-dudresnayi_contig104.432.1 ID=mRNA_D-dudresnayi_contig104.432.1|Name=mRNA_D-dudresnayi_contig104.432.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1362bp|location=Sequence derived from alignment at D-dudresnayi_contig104:20358..21038+ (Desmarestia dudresnayi DdudBR16 monoicous)
GTTGGCTACTGCTGGAAGTACCTGGTGCATAAGCCTGCTCGTCGTTCTGC
TATTGCTCGTAGACACAGCGACAACGCTGCTGCAGTACAGCACTGGAATG
CGTCTCGCCGCAGCAATGCCAGTGCAGGCTTCCTGTCTAACATTCAGACT
GTGCTCACCAATATGGCTTTCTATTTGACCCGCCCGACCAAGCTGTTCAC
CGCCATGGTAACAGGCTGGTACTCAGTCAACGACCCACAGGAAGAGCGCG
ACTGGTGCGCCATGAACCGCCCTGCCAATCTGCAAGCTTTCGTGTCTGCT
GGTGTTGCCTCAGATAACACTGATAATATGACTGAATCATCCACCCTCGC
TGCCCGCGCTGCGATGCGCACTACTATTCCTGTGGAAGTAGTGCAGATCA
TCTGTGCGGCAAGAGATGAAGTTGTGTATCCTTGGGCTGGACCAGCTACC
AGAGTGGTCAGCTCGAATAATCCTTATGTGAGCTCGATGCTGCAGGGTAG
TTTGACTCCCACCGCTCCATCACAATCCCAGCTGCAGCACGTCGCCCCCA
CCTCTGCTGTTGTCCCTGAGGGTGAGGTGTTGACTCGCCCTGAAGATGCT
GTGGCCCTCATTCTGCGTCTGTATCGCGACCACGTCAAGGCCAACGAGAT
GAGTCTGGTGGACCCCGATGACTCCGCCGAGGTTGGCTACTGCTGGAAGT
ACCTGGTGCATAAGCCTGCTCGTCGTTCTGCTATTGCTCGTAGACACAGC
GACAACGCTGCTGCAGTACAGCACTGGAATGCGTCTCGCCGCAGCAATGC
CAGTGCAGGCTTCCTGTCTAACATTCAGACTGTGCTCACCAATATGGCTT
TCTATTTGACCCGCCCGACCAAGCTGTTCACCGCCATGGTAACAGGCTGG
TACTCAGTCAACGACCCACAGGAAGAGCGCGACTGGTGCGCCATGAACCG
CCCTGCCAATCTGCAAGCTTTCGTGTCTGCTGGTGTTGCCTCAGATAACA
CTGATAATATGACTGAATCATCCACCCTCGCTGCCCGCGCTGCGATGCGC
ACTACTATTCCTGTGGAAGTAGTGCAGATCATCTGTGCGGCAAGAGATGA
AGTTGTGTATCCTTGGGCTGGACCAGCTACCAGAGTGGTCAGCTCGAATA
ATCCTTATGTGAGCTCGATGCTGCAGGGTAGTTTGACTCCCACCGCTCCA
TCACAATCCCAGCTGCAGCACGTCGCCCCCACCTCTGCTGTTGTCCCTGA
GGGTGAGGTGTTGACTCGCCCTGAAGATGCTGTGGCCCTCATTCTGCGTC
TGTATCGCGACCACGTCAAGGCCAACGAGATGAGTCTGGTGGACCCCGAT
GACTCCGCCGAG
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