mRNA_D-dudresnayi_contig10356.376.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10356.376.1
Unique NamemRNA_D-dudresnayi_contig10356.376.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10356.376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10356contigD-dudresnayi_contig10356:1260..5943 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size489
Cds size429
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10356.376.1prot_D-dudresnayi_contig10356.376.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10356 1318..5943 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927533.6367724-UTR-D-dudresnayi_contig10356:1259..13171622927533.6367724-UTR-D-dudresnayi_contig10356:1259..1317Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10356 1260..1317 +
1690556796.50436-UTR-D-dudresnayi_contig10356:1259..13171690556796.50436-UTR-D-dudresnayi_contig10356:1259..1317Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10356 1260..1317 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927533.652874-CDS-D-dudresnayi_contig10356:1317..16001622927533.652874-CDS-D-dudresnayi_contig10356:1317..1600Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10356 1318..1600 +
1690556796.526763-CDS-D-dudresnayi_contig10356:1317..16001690556796.526763-CDS-D-dudresnayi_contig10356:1317..1600Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10356 1318..1600 +
1622927533.6716697-CDS-D-dudresnayi_contig10356:5797..59431622927533.6716697-CDS-D-dudresnayi_contig10356:5797..5943Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10356 5798..5943 +
1690556796.5388951-CDS-D-dudresnayi_contig10356:5797..59431690556796.5388951-CDS-D-dudresnayi_contig10356:5797..5943Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10356 5798..5943 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10356.376.1

>prot_D-dudresnayi_contig10356.376.1 ID=prot_D-dudresnayi_contig10356.376.1|Name=mRNA_D-dudresnayi_contig10356.376.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=143bp
MEGQTGDGNPDANAAVAKPKSAEHVAGVAAGADPCQNRQSSAGSASAVGE
SDARAVDIASLPGGASPRKIKTGDTPGTAPPVKLEYEGKISSAAESWALA
DIRTAGPESFVYTGPIGDPALTGTIQGESGTSRAGSGIRQNNG
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mRNA from alignment at D-dudresnayi_contig10356:1260..5943+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10356.376.1 ID=mRNA_D-dudresnayi_contig10356.376.1|Name=mRNA_D-dudresnayi_contig10356.376.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=4684bp|location=Sequence derived from alignment at D-dudresnayi_contig10356:1260..5943+ (Desmarestia dudresnayi DdudBR16 monoicous)
CGTGAAGGGGCGATAGAGTTGGCTAAATCACAGGTTCCTGTTATTGGCAA
TTTTCTCGATGGAGGGGCAGACTGGAGATGGCAATCCTGATGCCAACGCC
GCCGTTGCCAAGCCGAAATCTGCGGAGCACGTTGCCGGAGTTGCTGCGGG
AGCTGACCCTTGTCAAAACAGACAGAGTAGTGCTGGTAGTGCCTCAGCTG
TGGGCGAGTCGGACGCACGAGCTGTTGATATTGCTTCGCTCCCTGGTGGT
GCTTCTCCCAGAAAAATAAAGACCGGGGATACACCTGGCACCGCTCCCCC
GGTGAAGCTGGAGTATGAGGGAAAAATCAGCTCTGCAGCAGGTGCGCTAT
CGAAGACTGTTGGAGAGGCAATCTCTGAGATGAGGCCGGTAATGTCTGTT
GGTGCGTTTGTTTGTGTGGGTATTCTGCGCGGTGTAGTAGTCGGCAACGA
CGTGTGGCGTTGACGTGTGTGTTCGCGTTGCGTAGAGCCCCGCCGTACTT
GCCTTCAACTGAGCACAAGAGTAGCGCCTGAGGCTGCGCCCAGTTTGTGA
TGTGATGCTTCGCTTGGTCAAGATGGATGCACGTTTTGGGCGGATTTTCA
AATATTTTCTTCAAATATCAAATATCTATAATGCGTGTACTCGTACAGCA
GCTGTATGACAGTAGTGGTCGATATCGTTTCTACAAACGCGACGATATGA
TACGAAGTATATGATATAATCGAAAAAACCCCGTGACATATGATATGATA
TGATATCGATATATATATATATCATATCATATATGATACGGAGTAAAAAC
GCTCGCATACGTCATTTTCAACGCATTTTTCATATAATAACATACTTCCA
AGTATAACCCTATGCTATCCGAACCATGGTGCTTGGGACACCTGTAAAAA
AAAACGGGGACGAAACAAGACCATCCCCGGGGTGAGAACAACTCCACCAA
CCGCGGGGACGGAAAGGTCACATCCCTGAGTCAAAAACACAGTCCATGCG
GTGGAGAAACCCCGCGAAAACAAAAAAAACATAATCCTTTTCTTTTGGTG
TTCGACTCGTGTCTGACACTAACTACTTGAATAAAGTATGGGTTTTGGTC
AGTCGGTCGGTCGTTGGGTTGGTTGGTCGGCCAGGCGGCTTTTCCATGGG
TGCCGTCGTCGCAAGGGCTTGTATATTTACCATATCATATGCTACGATAT
ATGGTATGATGATGTAAACATCTGCGCATACATCATGTTCAACGAACTAC
CCCAACATCTACCTGCTGCTTCGCACTGCGCACACCAACACGCATTCGTC
ATGATGACTCGACGCCAGCTGATTTCGTGACTTTTATATCATATCATATA
ATTCATATGATATGATATGTATAACGATATCGCGGGCTATTTTTCGGGTA
TTGATATGCTCATATCATGTGATACATCATGATATATCATAACTTATGAT
ATGATACCGACCTCTATACGACTGTCAGCACCGAATACCTTGTACAGTGT
ACACTACTGTAGAAACTTCTACAGTATGCAAACATATCATACGCGTACGA
GTATGTTTCCCGAGTGCTGACTTTGATGGATACTACGAGTACTGCTGGGG
GGATTGTCCCTCACATAGGTGCAATTTTACAGCTCTACAGTACAGTAGAG
CTATCATATACTGGTACAACCTCCTCCCTTCTCCCGAATACAAAATGCAT
GTGAGAGTACTCTCTATGCTGCTTGATTACTTCTACCTCGTACTGTTGTG
TGCTATGATATCTTCGTATCATACAAGTACAGCTTGGACGTTGACACGAG
TCTGAGCGCTTACCACTACTCGTACCAGGGGTACCTGGTGTGGTGCAGCA
GCAGCCGGCAAAACGCCCCTCTCAATGTTTCTGCACACACCACACACGCC
AACACACCTCAACACCGAACGATACACAACTACCCTCAAAATTATCCAGT
ACGAGTAGAGCCTGGGACGACCCAGGGGAGTCACTGCGCTATACCTTATC
TGAGGACCGATAGACTCCGCGTGACCAATGTATCACACAGTGAGGTTGAC
GATTATCCCCTAGCCCCCGAGCCAGTTTGGAACGTCACGGCTAAATGTAT
TTGTAATTTAACATAACACTGCGCCTGTTAATAGCTCTGGTAACGGCGCA
GTTAGCTCCTTCTCTTCCGTTAGTGCCTATTATACGGTCAGTACCTGGAG
TTCTTGTACTTCGTATTTTACGACAAAGCTTGCACGTGAAAGCTTGACAG
GACATCAGACCTATGTCTAGAGCTACAGTAGTAGTAGTATCCTTCTGTTG
CCAGCAAAGAATAACGCTTTGTTTTTACCCATCCCGCCAGAGGATAAAAA
AACAAACAAGTAATAAACGCAAGCTTTTTCGAAGATGAACAAGTACGCAT
GGCACACCCCCAACAAGAATCTGAGTTCCGCCGTTGCTTGCCGCAATGTT
TGCACGGTCGACTGGGATCACCAAACGGCACTGAAATGCATGACAGCGGA
GTGATCTCTTTCTGGTATGGTTGTATTTCCTTGGGGCTTGCGTGTGTTTT
GTATATGTGAAGGCTTCGGCCTAGTATACGAGTAGAGCCCATGCTGCGAC
TACTACTACTGTTGCAGTTGTTTTGTCGTGTTGTTGTTGTTGTTGTCTTC
ACGTTAAGAAATCGTCCTCTCTACCGTGCGACAACCAGTAGCGTCCTCAG
AGCCTGTACTGGTTCTTCCATCCTAGAGCGATTTTCGAAATCCCATGATC
ACAAGCTACATAATAATAGCACCAAAAATCGCAAAACTGAACACAAAGGG
GAAAAAACTAGAATCATAAGAGAGAAAAGAAAAAAGAAAAAACGGTCTGT
GGGCTCTGTTTATTAGGAGGCGTCGCGATGTGACTCTCTCGGTCGATGTC
ATTTGGGCTCTCTGTATACATGTTCACGCCCAAGCAGAGTCTGCAAATTT
GGTGATAGCGCGTTACATAGCGCATGCCACGCAATCCAGCAGTATTTATA
TACTTGGGAGGAGTCATGCTACGGTAGCTGGGGGTACTTTTGGGCCCAAA
ATGCTCTGGCTGATGGGGCTCTTGAACTGAGGAACTGCACAATATCTTTG
AAATGGCATGCGTGTTGTAAAATTGTATTCGAAATATACCTAGTCGATGG
GATTGTTTCCGGGTTGCGGGTAAATGTTTTTGTCAAAAGTCGGGTATTGG
TTGAGATATAGAGCTCTTCACGTGCGGAGCCTCAGAAAATTTGCGTACCC
CCCCTACCGTAGCATGCCTCGGAGTACCTATCTACAGTATCTTTAGGGGG
GTTTGTAGTCCCTGTTATTATTATTATTCTTACAAAGACATCAGCCGTGA
CGTTCCAAACTGGTTCGGGGGCCAGGGGATAATCGTCAACCTCACTGTTT
GATACATCGGTCGCGCGGATTCTATCGGTCCTCAGATAAGTTATAACGCA
GTGGCTCCCCTGGGGCGTCCCAGGCTCTACAGGATAATTTTGGGAAACAG
GCCCCATCATCGTGTGCACTGGATCATAATCTTTCGGAGGGGGGCGGGAA
GTAACTGTGCACGTGCGACATTTTATTATGGTGTGGTCGTTAGGTTAAGG
TTAGGGTTAGGGTTAGTTCTAACGGCGGAACAGTCACGAATCGTGACTAA
AAAAGGACACAAAAAAAAACAAAACATGACGACTCCAGACAAGGGACGTC
CGTAATTGTGGTTTTGAAGCGGATTGAAAAAACTCTAAAAAAAAGCAGGG
ATGGCAGTTACCGGTAACAGGTAATTACCGGTAACTGAAATGAGAGGTTA
ATAATTCACAAATCTGAGGTAATTTATGGCGTCCGCTGTCCCTTACGATA
AGAACGCCTGCATAATTTGTGGAAACCCCGTCCCAAATCCAATACCACAT
GAAAAACGCAACAGCCCACCGCACTTTCGGCCCATCATATGAGATTCATC
ATGCCTTCATTGGAGAATACAATAATAGTTAATTGTGTTCTGCCCCGAGT
GATACGCATTCGCTAGCTGATTTTAACCACGGGGATGATACGAATCATCC
CCGGTTTTGAGGTAGTTACCGGTAAGTAGTAGGAAAGGTCGATTTCGCGT
AATTACGGGTAAGTAATAGGTCAAGGTCAAGGTAACTGCCATCCCTGAAA
AAAAGTAACGACGGTTCGTGACTTTCAAAAGAGCCAACATGAAGTCACGA
AACCGGATATTTTTTGTCGTGATTCGTGATTTTTTTTGCCCATTAGAACC
GACCCTTAGGATTAGTTCTATAAGCTGTTCCGAGTTGCTGAGCAGCCCGC
GTTGGTACTATTAGTACTTCGAGTATAACAAAACGAACATCGTATGTATC
CTGTCGATAGGTGTTGGTAAATGGGGGCTCACGCAATCTGTGCATATTCC
GAGTCCCTCTCGTGTAGTCCAACACGCTACGCCGACGACATCACAGCTTT
GAAGAGAAAGAAAAAAACAGGACAAACCAGTAAAAAACGACCCCGTGGCG
ATACGTCTGTTTGTTTATGTTTTGCCCCCCTACGAAAGAATCATGGGCCC
TGGCCGACATACGCACAGCAGGGCCAGAGTCTTTCGTCTATACTGGACCA
ATCGGAGATCCCGCTCTTACCGGCACGATTCAGGGCGAGAGCGGGACGTC
GAGAGCGGGAAGCGGTATCCGCCAAAACAATGGG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10356:1260..5943+

>mRNA_D-dudresnayi_contig10356.376.1 ID=mRNA_D-dudresnayi_contig10356.376.1|Name=mRNA_D-dudresnayi_contig10356.376.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=858bp|location=Sequence derived from alignment at D-dudresnayi_contig10356:1260..5943+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGAGGGGCAGACTGGAGATGGCAATCCTGATGCCAACGCCGCCGTTGC
CAAGCCGAAATCTGCGGAGCACGTTGCCGGAGTTGCTGCGGGAGCTGACC
CTTGTCAAAACAGACAGAGTAGTGCTGGTAGTGCCTCAGCTGTGGGCGAG
TCGGACGCACGAGCTGTTGATATTGCTTCGCTCCCTGGTGGTGCTTCTCC
CAGAAAAATAAAGACCGGGGATACACCTGGCACCGCTCCCCCGGTGAAGC
TGGAGTATGAGGGAAAAATCAGCTCTGCAGCAGATGGAGGGGCAGACTGG
AGATGGCAATCCTGATGCCAACGCCGCCGTTGCCAAGCCGAAATCTGCGG
AGCACGTTGCCGGAGTTGCTGCGGGAGCTGACCCTTGTCAAAACAGACAG
AGTAGTGCTGGTAGTGCCTCAGCTGTGGGCGAGTCGGACGCACGAGCTGT
TGATATTGCTTCGCTCCCTGGTGGTGCTTCTCCCAGAAAAATAAAGACCG
GGGATACACCTGGCACCGCTCCCCCGGTGAAGCTGGAGTATGAGGGAAAA
ATCAGCTCTGCAGCAGAATCATGGGCCCTGGCCGACATACGCACAGCAGG
GCCAGAGTCTTTCGTCTATACTGGACCAATCGGAGATCCCGCTCTTACCG
GCACGATTCAGGGCGAGAGCGGGACGTCGAGAGCGGGAAGCGGTATCCGC
CAAAACAATGGGAATCATGGGCCCTGGCCGACATACGCACAGCAGGGCCA
GAGTCTTTCGTCTATACTGGACCAATCGGAGATCCCGCTCTTACCGGCAC
GATTCAGGGCGAGAGCGGGACGTCGAGAGCGGGAAGCGGTATCCGCCAAA
ACAATGGG
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